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The map label for this gene is xcsF [H]

Identifier: 197104122

GI number: 197104122

Start: 709341

End: 710549

Strand: Direct

Name: xcsF [H]

Synonym: PHZ_c0656

Alternate gene names: 197104122

Gene position: 709341-710549 (Clockwise)

Preceding gene: 197104121

Following gene: 197104123

Centisome position: 17.75

GC content: 74.94

Gene sequence:

>1209_bases
ATGCCGGCGTTTGAATATGTCGCCCTCGACGGCGGCGGGCGCGCCCGCCGCGGCCTCGTCCAGGCGGCCAGCGAGCGCGC
GGCCCGCGACCAGCTTCAGGGCCGCAGGCTCACGCCCCTGAAGCTGGCCCCGGCGGCGGAGCGGACGGGCCTGCGCCAGC
GGCTGCTGCCCGACCGGGTGGGGCCGCGCCAGCTCGCCCTCGTCACCCGCCAGCTCGCCACCCTGATCGCGGTCGCCCCG
CTGGAAGAGGCCCTGCGGACCCTGGCCCTGCAGGCCGAGCGTCCGGGCGTCCGCCGCGTGCTGCTGGCCACCCACGCCGC
CGTGCTGGAGGGCTATCGGCTGTCGGACGCGATGGCGCGCCAGGGCGAGGCGTTCCCCCGGCTCTACCGGGCGATGGTGG
CGGCGGGCGAGAGCTCGGGCGCGCTGCCCGAGATCCTGGAGCGGCTGGCCGACCTGCTGGAGCGGGACGAGGCCGCGCGC
AGCCGGCTGCTGGTCGCGCTGATCTATCCCATGGCGCTGGCCGCCACGGCGCTCGCGGTGATCGCCGCGCTGATCGCGTT
CGTGGTGCCGAAGGTGGTCGAGCAGTTCGACAGCATGGGCCAGCGGCTGCCCTGGCTGACCCGGGCGATCATCGGCCTGT
CGGACGCGGTGCGAGACTGGGGCTGGCTGATCCTGGTGCTGGCCGTGCTGGCGGCCGCCGGCGCCGTCCAGGCGCTGCGC
CGGCCGGACCTGCGGCTGAGGTTCGACGCCGCGCTCCTGAAGGCGCCCCTCCTGGGGCGGCTGATCCGGGACCTGCACGC
CGCCCGGCTCGCCCGCACGCTGTCGACCATGATCGCCAGCGGCGTGCCGGTGCTGGAGGGCCTGCTGCTGACCGCCCCCA
CCGTGCACAACCGCGCCCAGCGGGCGGCGGTGGCCGAGATGGCCACCGTCGTGCGCGAGGGCGGCAGCCTGTCGGGCGCC
ATGCGCAGGGCCGGGCTGTTCCCGCCGATCCTCGTCTACATGGCCGCCAGCGGCGAGAACGCCGGCCGGGTGGACGTCAT
GCTGGGCCGCGCCGCCGAGTACCTGGAGCGCGAGTTCAACGCCGTGGTCGCCGTGGCGCTGAGCCTGCTCGAGCCGGCCA
TCATCATCGTCATGGGCCTGATCGTGACCGTGATCGTGCTCTCGATCCTCCTGCCCATCCTGCAGATCAACACCCTCGCC
TACCGCTGA

Upstream 100 bases:

>100_bases
GGCGGCGGCACGCTGCAGGCCGAGGCCCGGCGCTACGTGGCCGAGGGGATCACCTCGGTCGAGGAGGCGATCCGGGTCAG
CCGCCAGGAAGGCGCCGAGC

Downstream 100 bases:

>100_bases
AGAGACCCGCGATGACCGACTCCGTCCAGGACCAGACCCGCCCGCGCCCGCGCCGCCGCCGCGCCGAGGCCGGCTTCACC
CTCGTCGAGGTGATGGTGGT

Product: type II secretion system protein F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MPAFEYVALDGGGRARRGLVQAASERAARDQLQGRRLTPLKLAPAAERTGLRQRLLPDRVGPRQLALVTRQLATLIAVAP
LEEALRTLALQAERPGVRRVLLATHAAVLEGYRLSDAMARQGEAFPRLYRAMVAAGESSGALPEILERLADLLERDEAAR
SRLLVALIYPMALAATALAVIAALIAFVVPKVVEQFDSMGQRLPWLTRAIIGLSDAVRDWGWLILVLAVLAAAGAVQALR
RPDLRLRFDAALLKAPLLGRLIRDLHAARLARTLSTMIASGVPVLEGLLLTAPTVHNRAQRAAVAEMATVVREGGSLSGA
MRRAGLFPPILVYMAASGENAGRVDVMLGRAAEYLEREFNAVVAVALSLLEPAIIIVMGLIVTVIVLSILLPILQINTLA
YR

Sequences:

>Translated_402_residues
MPAFEYVALDGGGRARRGLVQAASERAARDQLQGRRLTPLKLAPAAERTGLRQRLLPDRVGPRQLALVTRQLATLIAVAP
LEEALRTLALQAERPGVRRVLLATHAAVLEGYRLSDAMARQGEAFPRLYRAMVAAGESSGALPEILERLADLLERDEAAR
SRLLVALIYPMALAATALAVIAALIAFVVPKVVEQFDSMGQRLPWLTRAIIGLSDAVRDWGWLILVLAVLAAAGAVQALR
RPDLRLRFDAALLKAPLLGRLIRDLHAARLARTLSTMIASGVPVLEGLLLTAPTVHNRAQRAAVAEMATVVREGGSLSGA
MRRAGLFPPILVYMAASGENAGRVDVMLGRAAEYLEREFNAVVAVALSLLEPAIIIVMGLIVTVIVLSILLPILQINTLA
YR
>Mature_401_residues
PAFEYVALDGGGRARRGLVQAASERAARDQLQGRRLTPLKLAPAAERTGLRQRLLPDRVGPRQLALVTRQLATLIAVAPL
EEALRTLALQAERPGVRRVLLATHAAVLEGYRLSDAMARQGEAFPRLYRAMVAAGESSGALPEILERLADLLERDEAARS
RLLVALIYPMALAATALAVIAALIAFVVPKVVEQFDSMGQRLPWLTRAIIGLSDAVRDWGWLILVLAVLAAAGAVQALRR
PDLRLRFDAALLKAPLLGRLIRDLHAARLARTLSTMIASGVPVLEGLLLTAPTVHNRAQRAAVAEMATVVREGGSLSGAM
RRAGLFPPILVYMAASGENAGRVDVMLGRAAEYLEREFNAVVAVALSLLEPAIIIVMGLIVTVIVLSILLPILQINTLAY
R

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

Organism=Escherichia coli, GI1789724, Length=397, Percent_Identity=40.0503778337531, Blast_Score=267, Evalue=8e-73,
Organism=Escherichia coli, GI1786295, Length=394, Percent_Identity=27.1573604060914, Blast_Score=129, Evalue=5e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003004
- InterPro:   IPR011850
- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 43240; Mature: 43109

Theoretical pI: Translated: 11.36; Mature: 11.36

Prosite motif: PS00874 T2SP_F

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAFEYVALDGGGRARRGLVQAASERAARDQLQGRRLTPLKLAPAAERTGLRQRLLPDRV
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCC
GPRQLALVTRQLATLIAVAPLEEALRTLALQAERPGVRRVLLATHAAVLEGYRLSDAMAR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHH
QGEAFPRLYRAMVAAGESSGALPEILERLADLLERDEAARSRLLVALIYPMALAATALAV
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAALIAFVVPKVVEQFDSMGQRLPWLTRAIIGLSDAVRDWGWLILVLAVLAAAGAVQALR
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RPDLRLRFDAALLKAPLLGRLIRDLHAARLARTLSTMIASGVPVLEGLLLTAPTVHNRAQ
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHH
RAAVAEMATVVREGGSLSGAMRRAGLFPPILVYMAASGENAGRVDVMLGRAAEYLEREFN
HHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
AVVAVALSLLEPAIIIVMGLIVTVIVLSILLPILQINTLAYR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PAFEYVALDGGGRARRGLVQAASERAARDQLQGRRLTPLKLAPAAERTGLRQRLLPDRV
CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCC
GPRQLALVTRQLATLIAVAPLEEALRTLALQAERPGVRRVLLATHAAVLEGYRLSDAMAR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHH
QGEAFPRLYRAMVAAGESSGALPEILERLADLLERDEAARSRLLVALIYPMALAATALAV
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAALIAFVVPKVVEQFDSMGQRLPWLTRAIIGLSDAVRDWGWLILVLAVLAAAGAVQALR
HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RPDLRLRFDAALLKAPLLGRLIRDLHAARLARTLSTMIASGVPVLEGLLLTAPTVHNRAQ
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHH
RAAVAEMATVVREGGSLSGAMRRAGLFPPILVYMAASGENAGRVDVMLGRAAEYLEREFN
HHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
AVVAVALSLLEPAIIIVMGLIVTVIVLSILLPILQINTLAYR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1588814; 10984043 [H]