Definition Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome.
Accession NC_011126
Length 1,559,514

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The map label for this gene is thrC [H]

Identifier: 195953001

GI number: 195953001

Start: 559485

End: 560723

Strand: Direct

Name: thrC [H]

Synonym: HY04AAS1_0626

Alternate gene names: 195953001

Gene position: 559485-560723 (Clockwise)

Preceding gene: 195953000

Following gene: 195953002

Centisome position: 35.88

GC content: 36.8

Gene sequence:

>1239_bases
ATGGCAAAACTCAAAGGACTAAAATGTAGAGAATGCAAGCGTGAATATCCTATAGAACCAATACACGTTTGTGAGTTTTG
TTTTGGTCCTTTGGAAGTAAATTATGATTATGATTATATTAAAAGCACAATAAACAAAGAAAACATATCAAAAGGTCCAA
AAAGTTTATGGAGATACATAGATTTGTTACCTGTAGAAAATCCTACCGTTGGGCTAACAGCAGGCTTTACCCCTCTTAAA
AAAGCAGATAAACTTGGAAAAATACTTGGTCTTAACAATTTATATATAAAAGATGATTCGGTAAACCATCCAACACTTTC
TTTTAAAGATAGAGTTGTATCTGTAGCTTTATCCAAAGCAAAAGAATTTGGTTTTGATACCGGGGCTTGCGCATCCACCG
GTAATTTGGCAAATTCTGTAGCAGCTCATTGCGCTCAATCAGATCTAAATTGCTACGTTTTTATACCTGCAAATCTTGAA
TCCCAAAAAATTATCGGTAGTCTTGTTTTCAATCCTACAGTGGTGGCAGTAAATGGAAATTACGACGATGTAAACAGGCT
ATGCTCAGAAATTGCCAACGATTTAGGATGGGCTTTTGTAAATATAAATATAAGACCATACTATGCAGAAGGTTCAAAAA
CCCTTGCTTTTGAAACTATAGAGCAACTTGGGTGGATAGCTCCAGATGCTATAGTAACTCCAGCGGCAAGTGGCTCCCTT
TTAACAAAGATTTATAAGGGTATAGAGGAATTTTACAAAGTAGGTTTGATAGACAAATATAACACTAGGGTATACGGGGC
TCAAGCCCTAGGATGTTCACCGATAGCCCAAGCTTTTAAAGAAGGGCTTGATTTTGTAAAACCAGTAAAACCAAATACCA
TAGCAAAATCAATAGCCATAGGAAATCCGGCAGATGGTATTTATGCTCTTGATGTGGTAAGAAAAACTGGTGGCACATGG
GAAACAGCCGATGACAATGAAATAATAGAAGGTATGAAGCTTTTAGCTCAAACAGAAGGGATATTTACAGAAACAGCGGG
CGGTACCACTATAGCTGTATTGAAGAAATTAGCTCAGCAAGGGCACTTCAAGCCAGATGAAATTGTAGTAGCATATATAA
CTGGTAATGGCTATAAGACTATGGAAGTATTGGAAGGAAAATTAAACGAGACGATACATATAAATCCAACGCTTAAGGAA
TTTAAAGAGGTAGTCCTCAAAAGGACTAAAGGAGCTTGA

Upstream 100 bases:

>100_bases
CTTATTCCAAACCATAAAAGCATCTAAACAAGAAAATATGCCAAGTGTTGTATGAAAGAGTTATAATAATTACTTATTAC
ATTTTGGAGGTTTTTAGGAA

Downstream 100 bases:

>100_bases
TATGGAAAAAGGAATGGGTGCTTTTGACCTCGTTACCACAATAGTAGTACTTGGAGTTATAGTGGCTGGTATCATAGTTC
TACTCGCAGCGGCATTTTAA

Product: threonine synthase

Products: NA

Alternate protein names: TS [H]

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MAKLKGLKCRECKREYPIEPIHVCEFCFGPLEVNYDYDYIKSTINKENISKGPKSLWRYIDLLPVENPTVGLTAGFTPLK
KADKLGKILGLNNLYIKDDSVNHPTLSFKDRVVSVALSKAKEFGFDTGACASTGNLANSVAAHCAQSDLNCYVFIPANLE
SQKIIGSLVFNPTVVAVNGNYDDVNRLCSEIANDLGWAFVNINIRPYYAEGSKTLAFETIEQLGWIAPDAIVTPAASGSL
LTKIYKGIEEFYKVGLIDKYNTRVYGAQALGCSPIAQAFKEGLDFVKPVKPNTIAKSIAIGNPADGIYALDVVRKTGGTW
ETADDNEIIEGMKLLAQTEGIFTETAGGTTIAVLKKLAQQGHFKPDEIVVAYITGNGYKTMEVLEGKLNETIHINPTLKE
FKEVVLKRTKGA

Sequences:

>Translated_412_residues
MAKLKGLKCRECKREYPIEPIHVCEFCFGPLEVNYDYDYIKSTINKENISKGPKSLWRYIDLLPVENPTVGLTAGFTPLK
KADKLGKILGLNNLYIKDDSVNHPTLSFKDRVVSVALSKAKEFGFDTGACASTGNLANSVAAHCAQSDLNCYVFIPANLE
SQKIIGSLVFNPTVVAVNGNYDDVNRLCSEIANDLGWAFVNINIRPYYAEGSKTLAFETIEQLGWIAPDAIVTPAASGSL
LTKIYKGIEEFYKVGLIDKYNTRVYGAQALGCSPIAQAFKEGLDFVKPVKPNTIAKSIAIGNPADGIYALDVVRKTGGTW
ETADDNEIIEGMKLLAQTEGIFTETAGGTTIAVLKKLAQQGHFKPDEIVVAYITGNGYKTMEVLEGKLNETIHINPTLKE
FKEVVLKRTKGA
>Mature_411_residues
AKLKGLKCRECKREYPIEPIHVCEFCFGPLEVNYDYDYIKSTINKENISKGPKSLWRYIDLLPVENPTVGLTAGFTPLKK
ADKLGKILGLNNLYIKDDSVNHPTLSFKDRVVSVALSKAKEFGFDTGACASTGNLANSVAAHCAQSDLNCYVFIPANLES
QKIIGSLVFNPTVVAVNGNYDDVNRLCSEIANDLGWAFVNINIRPYYAEGSKTLAFETIEQLGWIAPDAIVTPAASGSLL
TKIYKGIEEFYKVGLIDKYNTRVYGAQALGCSPIAQAFKEGLDFVKPVKPNTIAKSIAIGNPADGIYALDVVRKTGGTWE
TADDNEIIEGMKLLAQTEGIFTETAGGTTIAVLKKLAQQGHFKPDEIVVAYITGNGYKTMEVLEGKLNETIHINPTLKEF
KEVVLKRTKGA

Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]

COG id: COG0498

COG function: function code E; Threonine synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the threonine synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001926
- InterPro:   IPR000634
- InterPro:   IPR004450 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.2.3.1 [H]

Molecular weight: Translated: 45037; Mature: 44906

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKLKGLKCRECKREYPIEPIHVCEFCFGPLEVNYDYDYIKSTINKENISKGPKSLWRYI
CCCCCCCCHHHHHHHCCCCHHHHHHHCCCCEEECCCHHHHHHHHCHHHCCCCHHHHHHHH
DLLPVENPTVGLTAGFTPLKKADKLGKILGLNNLYIKDDSVNHPTLSFKDRVVSVALSKA
HHEECCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH
KEFGFDTGACASTGNLANSVAAHCAQSDLNCYVFIPANLESQKIIGSLVFNPTVVAVNGN
HHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHEEECCEEEEEECC
YDDVNRLCSEIANDLGWAFVNINIRPYYAEGSKTLAFETIEQLGWIAPDAIVTPAASGSL
HHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCEECCCCCCHH
LTKIYKGIEEFYKVGLIDKYNTRVYGAQALGCSPIAQAFKEGLDFVKPVKPNTIAKSIAI
HHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCC
GNPADGIYALDVVRKTGGTWETADDNEIIEGMKLLAQTEGIFTETAGGTTIAVLKKLAQQ
CCCCCCEEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHH
GHFKPDEIVVAYITGNGYKTMEVLEGKLNETIHINPTLKEFKEVVLKRTKGA
CCCCCCCEEEEEEECCCEEHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AKLKGLKCRECKREYPIEPIHVCEFCFGPLEVNYDYDYIKSTINKENISKGPKSLWRYI
CCCCCCCHHHHHHHCCCCHHHHHHHCCCCEEECCCHHHHHHHHCHHHCCCCHHHHHHHH
DLLPVENPTVGLTAGFTPLKKADKLGKILGLNNLYIKDDSVNHPTLSFKDRVVSVALSKA
HHEECCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH
KEFGFDTGACASTGNLANSVAAHCAQSDLNCYVFIPANLESQKIIGSLVFNPTVVAVNGN
HHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHEEECCEEEEEECC
YDDVNRLCSEIANDLGWAFVNINIRPYYAEGSKTLAFETIEQLGWIAPDAIVTPAASGSL
HHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCEECCCCCCHH
LTKIYKGIEEFYKVGLIDKYNTRVYGAQALGCSPIAQAFKEGLDFVKPVKPNTIAKSIAI
HHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCC
GNPADGIYALDVVRKTGGTWETADDNEIIEGMKLLAQTEGIFTETAGGTTIAVLKKLAQQ
CCCCCCEEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHH
GHFKPDEIVVAYITGNGYKTMEVLEGKLNETIHINPTLKEFKEVVLKRTKGA
CCCCCCCEEEEEEECCCEEHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]