Definition | Hydrogenobaculum sp. Y04AAS1 chromosome, complete genome. |
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Accession | NC_011126 |
Length | 1,559,514 |
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The map label for this gene is thrC [H]
Identifier: 195953001
GI number: 195953001
Start: 559485
End: 560723
Strand: Direct
Name: thrC [H]
Synonym: HY04AAS1_0626
Alternate gene names: 195953001
Gene position: 559485-560723 (Clockwise)
Preceding gene: 195953000
Following gene: 195953002
Centisome position: 35.88
GC content: 36.8
Gene sequence:
>1239_bases ATGGCAAAACTCAAAGGACTAAAATGTAGAGAATGCAAGCGTGAATATCCTATAGAACCAATACACGTTTGTGAGTTTTG TTTTGGTCCTTTGGAAGTAAATTATGATTATGATTATATTAAAAGCACAATAAACAAAGAAAACATATCAAAAGGTCCAA AAAGTTTATGGAGATACATAGATTTGTTACCTGTAGAAAATCCTACCGTTGGGCTAACAGCAGGCTTTACCCCTCTTAAA AAAGCAGATAAACTTGGAAAAATACTTGGTCTTAACAATTTATATATAAAAGATGATTCGGTAAACCATCCAACACTTTC TTTTAAAGATAGAGTTGTATCTGTAGCTTTATCCAAAGCAAAAGAATTTGGTTTTGATACCGGGGCTTGCGCATCCACCG GTAATTTGGCAAATTCTGTAGCAGCTCATTGCGCTCAATCAGATCTAAATTGCTACGTTTTTATACCTGCAAATCTTGAA TCCCAAAAAATTATCGGTAGTCTTGTTTTCAATCCTACAGTGGTGGCAGTAAATGGAAATTACGACGATGTAAACAGGCT ATGCTCAGAAATTGCCAACGATTTAGGATGGGCTTTTGTAAATATAAATATAAGACCATACTATGCAGAAGGTTCAAAAA CCCTTGCTTTTGAAACTATAGAGCAACTTGGGTGGATAGCTCCAGATGCTATAGTAACTCCAGCGGCAAGTGGCTCCCTT TTAACAAAGATTTATAAGGGTATAGAGGAATTTTACAAAGTAGGTTTGATAGACAAATATAACACTAGGGTATACGGGGC TCAAGCCCTAGGATGTTCACCGATAGCCCAAGCTTTTAAAGAAGGGCTTGATTTTGTAAAACCAGTAAAACCAAATACCA TAGCAAAATCAATAGCCATAGGAAATCCGGCAGATGGTATTTATGCTCTTGATGTGGTAAGAAAAACTGGTGGCACATGG GAAACAGCCGATGACAATGAAATAATAGAAGGTATGAAGCTTTTAGCTCAAACAGAAGGGATATTTACAGAAACAGCGGG CGGTACCACTATAGCTGTATTGAAGAAATTAGCTCAGCAAGGGCACTTCAAGCCAGATGAAATTGTAGTAGCATATATAA CTGGTAATGGCTATAAGACTATGGAAGTATTGGAAGGAAAATTAAACGAGACGATACATATAAATCCAACGCTTAAGGAA TTTAAAGAGGTAGTCCTCAAAAGGACTAAAGGAGCTTGA
Upstream 100 bases:
>100_bases CTTATTCCAAACCATAAAAGCATCTAAACAAGAAAATATGCCAAGTGTTGTATGAAAGAGTTATAATAATTACTTATTAC ATTTTGGAGGTTTTTAGGAA
Downstream 100 bases:
>100_bases TATGGAAAAAGGAATGGGTGCTTTTGACCTCGTTACCACAATAGTAGTACTTGGAGTTATAGTGGCTGGTATCATAGTTC TACTCGCAGCGGCATTTTAA
Product: threonine synthase
Products: NA
Alternate protein names: TS [H]
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MAKLKGLKCRECKREYPIEPIHVCEFCFGPLEVNYDYDYIKSTINKENISKGPKSLWRYIDLLPVENPTVGLTAGFTPLK KADKLGKILGLNNLYIKDDSVNHPTLSFKDRVVSVALSKAKEFGFDTGACASTGNLANSVAAHCAQSDLNCYVFIPANLE SQKIIGSLVFNPTVVAVNGNYDDVNRLCSEIANDLGWAFVNINIRPYYAEGSKTLAFETIEQLGWIAPDAIVTPAASGSL LTKIYKGIEEFYKVGLIDKYNTRVYGAQALGCSPIAQAFKEGLDFVKPVKPNTIAKSIAIGNPADGIYALDVVRKTGGTW ETADDNEIIEGMKLLAQTEGIFTETAGGTTIAVLKKLAQQGHFKPDEIVVAYITGNGYKTMEVLEGKLNETIHINPTLKE FKEVVLKRTKGA
Sequences:
>Translated_412_residues MAKLKGLKCRECKREYPIEPIHVCEFCFGPLEVNYDYDYIKSTINKENISKGPKSLWRYIDLLPVENPTVGLTAGFTPLK KADKLGKILGLNNLYIKDDSVNHPTLSFKDRVVSVALSKAKEFGFDTGACASTGNLANSVAAHCAQSDLNCYVFIPANLE SQKIIGSLVFNPTVVAVNGNYDDVNRLCSEIANDLGWAFVNINIRPYYAEGSKTLAFETIEQLGWIAPDAIVTPAASGSL LTKIYKGIEEFYKVGLIDKYNTRVYGAQALGCSPIAQAFKEGLDFVKPVKPNTIAKSIAIGNPADGIYALDVVRKTGGTW ETADDNEIIEGMKLLAQTEGIFTETAGGTTIAVLKKLAQQGHFKPDEIVVAYITGNGYKTMEVLEGKLNETIHINPTLKE FKEVVLKRTKGA >Mature_411_residues AKLKGLKCRECKREYPIEPIHVCEFCFGPLEVNYDYDYIKSTINKENISKGPKSLWRYIDLLPVENPTVGLTAGFTPLKK ADKLGKILGLNNLYIKDDSVNHPTLSFKDRVVSVALSKAKEFGFDTGACASTGNLANSVAAHCAQSDLNCYVFIPANLES QKIIGSLVFNPTVVAVNGNYDDVNRLCSEIANDLGWAFVNINIRPYYAEGSKTLAFETIEQLGWIAPDAIVTPAASGSLL TKIYKGIEEFYKVGLIDKYNTRVYGAQALGCSPIAQAFKEGLDFVKPVKPNTIAKSIAIGNPADGIYALDVVRKTGGTWE TADDNEIIEGMKLLAQTEGIFTETAGGTTIAVLKKLAQQGHFKPDEIVVAYITGNGYKTMEVLEGKLNETIHINPTLKEF KEVVLKRTKGA
Specific function: Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine [H]
COG id: COG0498
COG function: function code E; Threonine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the threonine synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR004450 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =4.2.3.1 [H]
Molecular weight: Translated: 45037; Mature: 44906
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLKGLKCRECKREYPIEPIHVCEFCFGPLEVNYDYDYIKSTINKENISKGPKSLWRYI CCCCCCCCHHHHHHHCCCCHHHHHHHCCCCEEECCCHHHHHHHHCHHHCCCCHHHHHHHH DLLPVENPTVGLTAGFTPLKKADKLGKILGLNNLYIKDDSVNHPTLSFKDRVVSVALSKA HHEECCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH KEFGFDTGACASTGNLANSVAAHCAQSDLNCYVFIPANLESQKIIGSLVFNPTVVAVNGN HHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHEEECCEEEEEECC YDDVNRLCSEIANDLGWAFVNINIRPYYAEGSKTLAFETIEQLGWIAPDAIVTPAASGSL HHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCEECCCCCCHH LTKIYKGIEEFYKVGLIDKYNTRVYGAQALGCSPIAQAFKEGLDFVKPVKPNTIAKSIAI HHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCC GNPADGIYALDVVRKTGGTWETADDNEIIEGMKLLAQTEGIFTETAGGTTIAVLKKLAQQ CCCCCCEEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHH GHFKPDEIVVAYITGNGYKTMEVLEGKLNETIHINPTLKEFKEVVLKRTKGA CCCCCCCEEEEEEECCCEEHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCC >Mature Secondary Structure AKLKGLKCRECKREYPIEPIHVCEFCFGPLEVNYDYDYIKSTINKENISKGPKSLWRYI CCCCCCCHHHHHHHCCCCHHHHHHHCCCCEEECCCHHHHHHHHCHHHCCCCHHHHHHHH DLLPVENPTVGLTAGFTPLKKADKLGKILGLNNLYIKDDSVNHPTLSFKDRVVSVALSKA HHEECCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH KEFGFDTGACASTGNLANSVAAHCAQSDLNCYVFIPANLESQKIIGSLVFNPTVVAVNGN HHCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHEEECCEEEEEECC YDDVNRLCSEIANDLGWAFVNINIRPYYAEGSKTLAFETIEQLGWIAPDAIVTPAASGSL HHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCCCEECCCCCCHH LTKIYKGIEEFYKVGLIDKYNTRVYGAQALGCSPIAQAFKEGLDFVKPVKPNTIAKSIAI HHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHCC GNPADGIYALDVVRKTGGTWETADDNEIIEGMKLLAQTEGIFTETAGGTTIAVLKKLAQQ CCCCCCEEEEEEHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHH GHFKPDEIVVAYITGNGYKTMEVLEGKLNETIHINPTLKEFKEVVLKRTKGA CCCCCCCEEEEEEECCCEEHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]