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The map label for this gene is osmF [H]

Identifier: 194738120

GI number: 194738120

Start: 2280541

End: 2281458

Strand: Reverse

Name: osmF [H]

Synonym: SeSA_A2403

Alternate gene names: 194738120

Gene position: 2281458-2280541 (Counterclockwise)

Preceding gene: 194736410

Following gene: 194736570

Centisome position: 48.45

GC content: 55.12

Gene sequence:

>918_bases
ATGACGATCTCAAAGCTATGGGTAAGTTCGCTGGCGTTGCTGGCGACGGTGAGTTTACCTCTACAGGCGGCATCGCCCGT
GACGGTCGGGTCAAAGATTGATACCGAAGGCGCGCTGCTCGGCAACATGATTTTGCAGGTACTGGAAAGCCACGGCGTTA
AAACGGTCAATAAAATTCAGCTCGGGACCACGCCAGTCGTTCGTGGCGCGATTACCGCCGGAGAGCTGGATATCTATCCG
GAATACACCGGTAACGGGGCGTTCTTTTTTAAAGATGAAAACGATCCGGCATGGAAGAATGCAAAGCAAGGCTTTGAGAA
AGTCAAAAAACTGGATGCGGAGCAGAATAAGCTGGTCTGGTTGATGCCTGCGCCGGCAAATAACACCTGGACCATCGCGG
TACGCCAGGACATCGCGGAAAAAAATAAACTCTCCTCGCTTGCCGATCTCAGCCGTTATCTGAAAGAGGGCGGCACTTTT
AAACTGGCGGCGTCTGCGGAATTTATCGAACGGGCGGATGCGCTGCCGGCATTTGAAAAAGCCTATGATTTTACCTTGAA
TCAGAACCAGCTCTTGTCGCTGGCGGGCGGCGATACGGCGGTCACGATCAAAGCCGCCGCGCAACAAACATCCGGCGTTA
ACGCCGCGATGGCGTATGGCACCGACGGCCCTGTCGCCGCGCTGGGTCTGCAAACCCTGAGCGACCCGAAAGGCGTCCAG
CCTATCTATGCCCCCGCGCCGGTAGTGCGTGAATCGGTGTTACAAGCCTATCCGCAGATAGCCGACTGGCTGCAGCCCGT
TTTCGCCAGCCTTGATGAGAAAACGCTGCAACAGTTGAACGCCAGAATCGCCGTAGAAGGGCTGGATGCGAAAAAAGTCG
CCGCAGATTACCTCCGACAAAAAGGGTGGGTGAAGTAA

Upstream 100 bases:

>100_bases
CACTTACACTGGCGGAAAATCCCAGGTTAAACGCAGACTTTTCAACTATGCTTTTTTCTCAAGTCTCTGAAAAAGGCCGT
AAAAGGATGAGGAAAGCATC

Downstream 100 bases:

>100_bases
TCTGTGAGTGACGCTGCCAAAAAAATTACGGTTAATCGTGTGCTGTTGCTGTTGGTTGTTCTGGCCCTGCTTGCTGTCGC
GCTACCTTTCATTAATTACG

Product: amine ABC transporter periplasmic amine-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MTISKLWVSSLALLATVSLPLQAASPVTVGSKIDTEGALLGNMILQVLESHGVKTVNKIQLGTTPVVRGAITAGELDIYP
EYTGNGAFFFKDENDPAWKNAKQGFEKVKKLDAEQNKLVWLMPAPANNTWTIAVRQDIAEKNKLSSLADLSRYLKEGGTF
KLAASAEFIERADALPAFEKAYDFTLNQNQLLSLAGGDTAVTIKAAAQQTSGVNAAMAYGTDGPVAALGLQTLSDPKGVQ
PIYAPAPVVRESVLQAYPQIADWLQPVFASLDEKTLQQLNARIAVEGLDAKKVAADYLRQKGWVK

Sequences:

>Translated_305_residues
MTISKLWVSSLALLATVSLPLQAASPVTVGSKIDTEGALLGNMILQVLESHGVKTVNKIQLGTTPVVRGAITAGELDIYP
EYTGNGAFFFKDENDPAWKNAKQGFEKVKKLDAEQNKLVWLMPAPANNTWTIAVRQDIAEKNKLSSLADLSRYLKEGGTF
KLAASAEFIERADALPAFEKAYDFTLNQNQLLSLAGGDTAVTIKAAAQQTSGVNAAMAYGTDGPVAALGLQTLSDPKGVQ
PIYAPAPVVRESVLQAYPQIADWLQPVFASLDEKTLQQLNARIAVEGLDAKKVAADYLRQKGWVK
>Mature_304_residues
TISKLWVSSLALLATVSLPLQAASPVTVGSKIDTEGALLGNMILQVLESHGVKTVNKIQLGTTPVVRGAITAGELDIYPE
YTGNGAFFFKDENDPAWKNAKQGFEKVKKLDAEQNKLVWLMPAPANNTWTIAVRQDIAEKNKLSSLADLSRYLKEGGTFK
LAASAEFIERADALPAFEKAYDFTLNQNQLLSLAGGDTAVTIKAAAQQTSGVNAAMAYGTDGPVAALGLQTLSDPKGVQP
IYAPAPVVRESVLQAYPQIADWLQPVFASLDEKTLQQLNARIAVEGLDAKKVAADYLRQKGWVK

Specific function: May be part of an ABC transporter complex involved in uptake of osmoprotectant molecules [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=305, Percent_Identity=88.1967213114754, Blast_Score=549, Evalue=1e-158,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 32774; Mature: 32643

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISKLWVSSLALLATVSLPLQAASPVTVGSKIDTEGALLGNMILQVLESHGVKTVNKIQ
CCHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEE
LGTTPVVRGAITAGELDIYPEYTGNGAFFFKDENDPAWKNAKQGFEKVKKLDAEQNKLVW
CCCCHHHHHEEEECCEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEE
LMPAPANNTWTIAVRQDIAEKNKLSSLADLSRYLKEGGTFKLAASAEFIERADALPAFEK
EEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCCCHHHH
AYDFTLNQNQLLSLAGGDTAVTIKAAAQQTSGVNAAMAYGTDGPVAALGLQTLSDPKGVQ
HHCCCCCCCCEEEEECCCEEEEEEEHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCCCCC
PIYAPAPVVRESVLQAYPQIADWLQPVFASLDEKTLQQLNARIAVEGLDAKKVAADYLRQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEECCCHHHHHHHHHHH
KGWVK
CCCCC
>Mature Secondary Structure 
TISKLWVSSLALLATVSLPLQAASPVTVGSKIDTEGALLGNMILQVLESHGVKTVNKIQ
CHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEE
LGTTPVVRGAITAGELDIYPEYTGNGAFFFKDENDPAWKNAKQGFEKVKKLDAEQNKLVW
CCCCHHHHHEEEECCEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCEEE
LMPAPANNTWTIAVRQDIAEKNKLSSLADLSRYLKEGGTFKLAASAEFIERADALPAFEK
EEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHCCCHHHH
AYDFTLNQNQLLSLAGGDTAVTIKAAAQQTSGVNAAMAYGTDGPVAALGLQTLSDPKGVQ
HHCCCCCCCCEEEEECCCEEEEEEEHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCCCCC
PIYAPAPVVRESVLQAYPQIADWLQPVFASLDEKTLQQLNARIAVEGLDAKKVAADYLRQ
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEECCCHHHHHHHHHHH
KGWVK
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]