Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
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Accession | NC_011094 |
Length | 4,709,075 |
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The map label for this gene is yehY [H]
Identifier: 194736570
GI number: 194736570
Start: 2279368
End: 2280537
Strand: Reverse
Name: yehY [H]
Synonym: SeSA_A2402
Alternate gene names: 194736570
Gene position: 2280537-2279368 (Counterclockwise)
Preceding gene: 194738120
Following gene: 194738287
Centisome position: 48.43
GC content: 59.32
Gene sequence:
>1170_bases GTGAGTGACGCTGCCAAAAAAATTACGGTTAATCGTGTGCTGTTGCTGTTGGTTGTTCTGGCCCTGCTTGCTGTCGCGCT ACCTTTCATTAATTACGCCCCGAATCGTCTGGTGAGCGGCGAGGGGCGCCAGTTATGGGAGATCTGGCCGGCGACCATCT GGATGCTGACTGGCGCGGGATGCGCGCTGTTTACGCTGTGCTTTGTACCCGGTAAACGCGGTAGCGTACTGACGCTGATG ATGGCGCAGACGCTTTTTATTGTCATGCTGTGGGGAGTCGGTAGGGCGGCGACCCAGTTGGCGCAGGAGGGCAGCCCGCT GGCGCGTACCAGTCTGGGAAGTGGATTGTGGCTGGGCCTCGGTCTGATGCTGCTGGCCTGTAGCGATGCGATCCGCCGTA TTACCGTTGGGCCGCTGTGGCGCTGGTTGCTGCACGCGCAAATTGTCATTGTCCCGCTGGTGCTGCTGTTTTCAGGCACG TTCGACAACCTCTCGCTTCTGAAAGAGTATACCAATCGCCAGGATGTTTTCGATGCCGCGTTGGTGCAACATTTGATGTT GCTGGCGGGCACGGTGCTGCCGGCGCTGGCGATCGGACTACCATTGGGCGTCTGGTGTTATTTTTCCGCCTCACGCCAGG GGCCGGTGTTTACCGTGCTGAATGTGATCCAGACTATCCCTTCCGTCGCGCTGTTTGGCCTGCTGATTGCGCCGTTGGCC GGACTGGTGAAACAGTTTCCGTGGCTTGCCGCATTCGGCGTCGCGGGAACCGGCATGACGCCTGCGTTGATAGCGCTGGT GCTCTATGCGTTATTGCCGCTGGTGCGCGGCGTGGTCGCCGGGCTCAATCAGGTGCCGCGCGATGTGCTGGAGAGCGCAA GAGCAATGGGAATGAGTAGCGGCCAGCGCTTCAGGCATGTGCAACTGCCGCTGGCGCTGCCGGTCTTTTTACGTAGCCTG CGGGTAGTAATGGTCCAGACAGTGGGAATGGCCGTCGTCGCCGCGCTGATTGGCGCGGGAGGTTTCGGCGCGCTGGTGTT TCAGGGGCTATTGAGCAGCGCCATTGATTTAGTCCTGTTGGGCGTCATTCCGGTGATTGCGCTGGCGGTAGTGATCGACG CGCTGTTTGATTTATGGATCGCGTTTTTGAAGGGAGCAACCGATGATTGA
Upstream 100 bases:
>100_bases AACGCTGCAACAGTTGAACGCCAGAATCGCCGTAGAAGGGCTGGATGCGAAAAAAGTCGCCGCAGATTACCTCCGACAAA AAGGGTGGGTGAAGTAATCT
Downstream 100 bases:
>100_bases ATTTAACCATGTTAGTAAAACCTTCGGCGATCAACAGGCTGTTAGCGACCTCAATTTGCACTTTAGCGAAGGCAGCTTTT CGGTGTTAATTGGCACCTCC
Product: inner membrane ABC transporter permease YehY
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 388
Protein sequence:
>389_residues MSDAAKKITVNRVLLLLVVLALLAVALPFINYAPNRLVSGEGRQLWEIWPATIWMLTGAGCALFTLCFVPGKRGSVLTLM MAQTLFIVMLWGVGRAATQLAQEGSPLARTSLGSGLWLGLGLMLLACSDAIRRITVGPLWRWLLHAQIVIVPLVLLFSGT FDNLSLLKEYTNRQDVFDAALVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA GLVKQFPWLAAFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRHVQLPLALPVFLRSL RVVMVQTVGMAVVAALIGAGGFGALVFQGLLSSAIDLVLLGVIPVIALAVVIDALFDLWIAFLKGATDD
Sequences:
>Translated_389_residues MSDAAKKITVNRVLLLLVVLALLAVALPFINYAPNRLVSGEGRQLWEIWPATIWMLTGAGCALFTLCFVPGKRGSVLTLM MAQTLFIVMLWGVGRAATQLAQEGSPLARTSLGSGLWLGLGLMLLACSDAIRRITVGPLWRWLLHAQIVIVPLVLLFSGT FDNLSLLKEYTNRQDVFDAALVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA GLVKQFPWLAAFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRHVQLPLALPVFLRSL RVVMVQTVGMAVVAALIGAGGFGALVFQGLLSSAIDLVLLGVIPVIALAVVIDALFDLWIAFLKGATDD >Mature_388_residues SDAAKKITVNRVLLLLVVLALLAVALPFINYAPNRLVSGEGRQLWEIWPATIWMLTGAGCALFTLCFVPGKRGSVLTLMM AQTLFIVMLWGVGRAATQLAQEGSPLARTSLGSGLWLGLGLMLLACSDAIRRITVGPLWRWLLHAQIVIVPLVLLFSGTF DNLSLLKEYTNRQDVFDAALVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLAG LVKQFPWLAAFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSSGQRFRHVQLPLALPVFLRSLR VVMVQTVGMAVVAALIGAGGFGALVFQGLLSSAIDLVLLGVIPVIALAVVIDALFDLWIAFLKGATDD
Specific function: May be part of an ABC transporter complex involved in uptake of osmoprotectant molecules. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1174
COG function: function code E; ABC-type proline/glycine betaine transport systems, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788451, Length=362, Percent_Identity=77.3480662983425, Blast_Score=553, Evalue=1e-159, Organism=Escherichia coli, GI1788449, Length=224, Percent_Identity=33.0357142857143, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1789033, Length=180, Percent_Identity=30.5555555555556, Blast_Score=91, Evalue=2e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 41420; Mature: 41288
Theoretical pI: Translated: 10.11; Mature: 10.11
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAAKKITVNRVLLLLVVLALLAVALPFINYAPNRLVSGEGRQLWEIWPATIWMLTGAG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCH CALFTLCFVPGKRGSVLTLMMAQTLFIVMLWGVGRAATQLAQEGSPLARTSLGSGLWLGL HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHCCCHHHHHH GLMLLACSDAIRRITVGPLWRWLLHAQIVIVPLVLLFSGTFDNLSLLKEYTNRQDVFDAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHH LVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GLVKQFPWLAAFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSS HHHHHCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC GQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAGGFGALVFQGLLSSAIDLVLL CCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH GVIPVIALAVVIDALFDLWIAFLKGATDD HHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SDAAKKITVNRVLLLLVVLALLAVALPFINYAPNRLVSGEGRQLWEIWPATIWMLTGAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCH CALFTLCFVPGKRGSVLTLMMAQTLFIVMLWGVGRAATQLAQEGSPLARTSLGSGLWLGL HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHCCCHHHHHH GLMLLACSDAIRRITVGPLWRWLLHAQIVIVPLVLLFSGTFDNLSLLKEYTNRQDVFDAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCHHHHHHHH LVQHLMLLAGTVLPALAIGLPLGVWCYFSASRQGPVFTVLNVIQTIPSVALFGLLIAPLA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GLVKQFPWLAAFGVAGTGMTPALIALVLYALLPLVRGVVAGLNQVPRDVLESARAMGMSS HHHHHCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC GQRFRHVQLPLALPVFLRSLRVVMVQTVGMAVVAALIGAGGFGALVFQGLLSSAIDLVLL CCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH GVIPVIALAVVIDALFDLWIAFLKGATDD HHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]