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The map label for this gene is yicH [H]

Identifier: 194737842

GI number: 194737842

Start: 3827105

End: 3828814

Strand: Direct

Name: yicH [H]

Synonym: SeSA_A3955

Alternate gene names: 194737842

Gene position: 3827105-3828814 (Clockwise)

Preceding gene: 194734456

Following gene: 194736377

Centisome position: 81.27

GC content: 55.61

Gene sequence:

>1710_bases
ATGAAATTGATTGGGAGGTTGCTTCTCTATGTGCTGATCGCCTGTTTAGTGGTGATTTTCGGCTTTTATTTTCTGCTGCA
AACGCGCTGGGGCGCAGATCACATCAGCAACTGGGTATCAGAGAACAGCGGTTATCACCTCACCTTCGACGTGATGGATC
ATCGTTTTTCCGCCCCATCCCATCTTTTACTGGAGAATGTGACCTTTGGTCGTGATGGTCAGCCTGCTACCCTGGTCGCG
AAAACCGTAGATATCGGTCTGAGCATTCGCCAGTTAACCGCGCCGCTGCATGTCGACACGATTCTGTTACAGGACGGCAC
GCTGAATATTTCAGTGCAAACTGCCCCTTTCCCGTTTGAGGCCGACCGCCTGCAACTTCGCAATATGGCGCTCAATAGTC
CCGGCAGCGAATGGCGGTTGAGCGCCCAGCGCGTTAACGGCGGCGTTATGCCCTGGCGCCCCGAAGCCGGTCGGGTATTG
GGCAATAAAGCCCAGATCCAACTGAGCGCTGGTTCGCTGACGTTAAACGACGTTCCCGCCACTAATGTGCTTATTGAAGG
CAGTATCGACCATAATCAGGTGATGTTAAACACCGTCGGCGCCGATATGGCGCGCGGAGCGTTAACCGGCGTCGCCCGGC
GTAACGCTGACGGTAGTTGGGTCGTTGAAAATCTGCGGCTGAATGATATTCGGTTACAAAGCGATAAATCCCTGAGCGAG
TTTTTCGCGCCGCTTACTACGGTTCCATCTTTGCAGATTGGTCGTCTTGAAGTGACGGACTCCAGCCTGCAAGGACCAGA
CTGGGCAGTCACCGATCTTGACCTGAGTTTGCGCAATCTGACTCTGCGCAAAGAAGACTGGCAAAGTCAGGAAGGTAAAT
TATCGATGAACGCCAGCGAGTTTATTTACGGCTCGCTGCACTTGCTCGATCCAATCCTGAACGCCGAATTTTCACCACAG
GGCGTTGCGCTACGCCAGTTCACCACCCGCTGGGAAGGCGGTATGGTCAGAACTTCCGGCGCCTGGTTACGCGAGAGCAA
AGCGCTTATTCTGGACGATACCGCTATCGCCGGGCTGGAGTATACGCTGCCGGAAAACTGGAAGCAGCTATGGATGAAGC
CGTTGCCCGACTGGTTGAATAGCCTGACGCTGAAAAAATTCAGCGCCAGCCGCAACCTGGTGATTGATATCGACCCGGCC
TTCCCGTGGCAAATCACCGCTCTGGACGGCTACGGCGCAAACCTGGAGCTGGTACAACATCATCAATGGGGCGTCTGGAG
CGGCAATGCGACCCTCAACGCCGCAGCGGCAACCTTTAACCGTGTGGATGTGCGCCGCCCGTCGCTGTCGTTGACGGCTA
ATGCCAGCACAGTCAACATCAGCGATCTGAGCGCGTTTACTGGAAAAGGGATACTGGAAGCCACTGCCAGCGTATCGCAA
CTGCCGCAGCGTCAGACGCAAATCAGCCTGAACGGACGCGGCGTACCAATGGATGTGCTACAACAGTGGGGCTGGCCGGC
ATTACCGATTGCTGGCGATGGCAATATTCAGCTCACGGCCAGCGGCAATATTCAGGCCGATGCGCCGTTGAAACCGACGG
TAAACGGGCAATTACACGCGGTCAACGCACAAAAGCAGCAGATAACGCAGACGATGCAAGCGGGCGTGGTGTCCGGCGGG
GAAGTTACGTCAACGGAGCCAGCGCTGTAA

Upstream 100 bases:

>100_bases
GATTCGCCGCTGCTGTAACGCTCTTTCACCATTCCTGTCTTGAGGATTGCACGCAAATCGTGCATAAATCCCCTATGTGC
ATTTCACGGGATGGAAGACC

Downstream 100 bases:

>100_bases
TTGAGGGCTTGCCCGGTGGCGCTGACGCTTACCGGGCTTACGATTCTTGCTCATTTGTAGGCCGGATAAGCGCAGCTCAC
AGCACCATCCGGCGATTCAG

Product: AsmA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 569; Mature: 569

Protein sequence:

>569_residues
MKLIGRLLLYVLIACLVVIFGFYFLLQTRWGADHISNWVSENSGYHLTFDVMDHRFSAPSHLLLENVTFGRDGQPATLVA
KTVDIGLSIRQLTAPLHVDTILLQDGTLNISVQTAPFPFEADRLQLRNMALNSPGSEWRLSAQRVNGGVMPWRPEAGRVL
GNKAQIQLSAGSLTLNDVPATNVLIEGSIDHNQVMLNTVGADMARGALTGVARRNADGSWVVENLRLNDIRLQSDKSLSE
FFAPLTTVPSLQIGRLEVTDSSLQGPDWAVTDLDLSLRNLTLRKEDWQSQEGKLSMNASEFIYGSLHLLDPILNAEFSPQ
GVALRQFTTRWEGGMVRTSGAWLRESKALILDDTAIAGLEYTLPENWKQLWMKPLPDWLNSLTLKKFSASRNLVIDIDPA
FPWQITALDGYGANLELVQHHQWGVWSGNATLNAAAATFNRVDVRRPSLSLTANASTVNISDLSAFTGKGILEATASVSQ
LPQRQTQISLNGRGVPMDVLQQWGWPALPIAGDGNIQLTASGNIQADAPLKPTVNGQLHAVNAQKQQITQTMQAGVVSGG
EVTSTEPAL

Sequences:

>Translated_569_residues
MKLIGRLLLYVLIACLVVIFGFYFLLQTRWGADHISNWVSENSGYHLTFDVMDHRFSAPSHLLLENVTFGRDGQPATLVA
KTVDIGLSIRQLTAPLHVDTILLQDGTLNISVQTAPFPFEADRLQLRNMALNSPGSEWRLSAQRVNGGVMPWRPEAGRVL
GNKAQIQLSAGSLTLNDVPATNVLIEGSIDHNQVMLNTVGADMARGALTGVARRNADGSWVVENLRLNDIRLQSDKSLSE
FFAPLTTVPSLQIGRLEVTDSSLQGPDWAVTDLDLSLRNLTLRKEDWQSQEGKLSMNASEFIYGSLHLLDPILNAEFSPQ
GVALRQFTTRWEGGMVRTSGAWLRESKALILDDTAIAGLEYTLPENWKQLWMKPLPDWLNSLTLKKFSASRNLVIDIDPA
FPWQITALDGYGANLELVQHHQWGVWSGNATLNAAAATFNRVDVRRPSLSLTANASTVNISDLSAFTGKGILEATASVSQ
LPQRQTQISLNGRGVPMDVLQQWGWPALPIAGDGNIQLTASGNIQADAPLKPTVNGQLHAVNAQKQQITQTMQAGVVSGG
EVTSTEPAL
>Mature_569_residues
MKLIGRLLLYVLIACLVVIFGFYFLLQTRWGADHISNWVSENSGYHLTFDVMDHRFSAPSHLLLENVTFGRDGQPATLVA
KTVDIGLSIRQLTAPLHVDTILLQDGTLNISVQTAPFPFEADRLQLRNMALNSPGSEWRLSAQRVNGGVMPWRPEAGRVL
GNKAQIQLSAGSLTLNDVPATNVLIEGSIDHNQVMLNTVGADMARGALTGVARRNADGSWVVENLRLNDIRLQSDKSLSE
FFAPLTTVPSLQIGRLEVTDSSLQGPDWAVTDLDLSLRNLTLRKEDWQSQEGKLSMNASEFIYGSLHLLDPILNAEFSPQ
GVALRQFTTRWEGGMVRTSGAWLRESKALILDDTAIAGLEYTLPENWKQLWMKPLPDWLNSLTLKKFSASRNLVIDIDPA
FPWQITALDGYGANLELVQHHQWGVWSGNATLNAAAATFNRVDVRRPSLSLTANASTVNISDLSAFTGKGILEATASVSQ
LPQRQTQISLNGRGVPMDVLQQWGWPALPIAGDGNIQLTASGNIQADAPLKPTVNGQLHAVNAQKQQITQTMQAGVVSGG
EVTSTEPAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790088, Length=567, Percent_Identity=80.2469135802469, Blast_Score=928, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007844 [H]

Pfam domain/function: PF05170 AsmA [H]

EC number: NA

Molecular weight: Translated: 62187; Mature: 62187

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLIGRLLLYVLIACLVVIFGFYFLLQTRWGADHISNWVSENSGYHLTFDVMDHRFSAPS
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCC
HLLLENVTFGRDGQPATLVAKTVDIGLSIRQLTAPLHVDTILLQDGTLNISVQTAPFPFE
CEEEECCCCCCCCCCCEEEEEEHCCCCEEEHHCCCEEEEEEEEECCEEEEEEEECCCCCC
ADRLQLRNMALNSPGSEWRLSAQRVNGGVMPWRPEAGRVLGNKAQIQLSAGSLTLNDVPA
HHHHHHHHHHCCCCCCHHEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCC
TNVLIEGSIDHNQVMLNTVGADMARGALTGVARRNADGSWVVENLRLNDIRLQSDKSLSE
CEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCHHH
FFAPLTTVPSLQIGRLEVTDSSLQGPDWAVTDLDLSLRNLTLRKEDWQSQEGKLSMNASE
HHHHHHCCCCCEECEEEEECCCCCCCCEEEEEECEEEEEEEEECCCCCCCCCEEECCHHH
FIYGSLHLLDPILNAEFSPQGVALRQFTTRWEGGMVRTSGAWLRESKALILDDTAIAGLE
HEEEHHHHHHHHHCCCCCCCCEEHHHHHHHCCCCEEEECCCHHCCCCEEEEECCEECCEE
YTLPENWKQLWMKPLPDWLNSLTLKKFSASRNLVIDIDPAFPWQITALDGYGANLELVQH
ECCCHHHHHHHHHHCHHHHHHHEEEEECCCCCEEEEECCCCCEEEEEECCCCCCEEEEEE
HQWGVWSGNATLNAAAATFNRVDVRRPSLSLTANASTVNISDLSAFTGKGILEATASVSQ
CCCCEEECCCEEEEHHHEECCEEEECCCEEEEECCCEEEEHHHHHHCCCCHHHHHHHHHH
LPQRQTQISLNGRGVPMDVLQQWGWPALPIAGDGNIQLTASGNIQADAPLKPTVNGQLHA
CCCCCEEEEECCCCCCHHHHHHCCCCCEEEECCCCEEEEECCCEEECCCCCCCCCCEEEE
VNAQKQQITQTMQAGVVSGGEVTSTEPAL
ECCHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKLIGRLLLYVLIACLVVIFGFYFLLQTRWGADHISNWVSENSGYHLTFDVMDHRFSAPS
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEECCCCCCCC
HLLLENVTFGRDGQPATLVAKTVDIGLSIRQLTAPLHVDTILLQDGTLNISVQTAPFPFE
CEEEECCCCCCCCCCCEEEEEEHCCCCEEEHHCCCEEEEEEEEECCEEEEEEEECCCCCC
ADRLQLRNMALNSPGSEWRLSAQRVNGGVMPWRPEAGRVLGNKAQIQLSAGSLTLNDVPA
HHHHHHHHHHCCCCCCHHEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCC
TNVLIEGSIDHNQVMLNTVGADMARGALTGVARRNADGSWVVENLRLNDIRLQSDKSLSE
CEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCHHH
FFAPLTTVPSLQIGRLEVTDSSLQGPDWAVTDLDLSLRNLTLRKEDWQSQEGKLSMNASE
HHHHHHCCCCCEECEEEEECCCCCCCCEEEEEECEEEEEEEEECCCCCCCCCEEECCHHH
FIYGSLHLLDPILNAEFSPQGVALRQFTTRWEGGMVRTSGAWLRESKALILDDTAIAGLE
HEEEHHHHHHHHHCCCCCCCCEEHHHHHHHCCCCEEEECCCHHCCCCEEEEECCEECCEE
YTLPENWKQLWMKPLPDWLNSLTLKKFSASRNLVIDIDPAFPWQITALDGYGANLELVQH
ECCCHHHHHHHHHHCHHHHHHHEEEEECCCCCEEEEECCCCCEEEEEECCCCCCEEEEEE
HQWGVWSGNATLNAAAATFNRVDVRRPSLSLTANASTVNISDLSAFTGKGILEATASVSQ
CCCCEEECCCEEEEHHHEECCEEEECCCEEEEECCCEEEEHHHHHHCCCCHHHHHHHHHH
LPQRQTQISLNGRGVPMDVLQQWGWPALPIAGDGNIQLTASGNIQADAPLKPTVNGQLHA
CCCCCEEEEECCCCCCHHHHHHCCCCCEEEECCCCEEEEECCCEEECCCCCCCCCCEEEE
VNAQKQQITQTMQAGVVSGGEVTSTEPAL
ECCHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]