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The map label for this gene is 194737788

Identifier: 194737788

GI number: 194737788

Start: 1654813

End: 1656957

Strand: Direct

Name: 194737788

Synonym: SeSA_A1713

Alternate gene names: NA

Gene position: 1654813-1656957 (Clockwise)

Preceding gene: 194737013

Following gene: 194734475

Centisome position: 35.14

GC content: 56.83

Gene sequence:

>2145_bases
ATGACAAAACCGTTAAACGCCACCCAGGCTGTTATCGAGTGGGTTAACAACACGCGCCGTTACGCAACGCGACTGGATGA
CGAAGCCGACGCTCTGCTGGCGCAACTTACGCTTGCCGCGGCGGATGAGTCAGCGCTCAACGCCGCCTGCGCATCACATG
GCTGCGTTGGTCTGTACGGGTATGCGCAATCCGCAAAAGCGCATCTGTTAACGACGCTATGCGGTAACGAGAATGGCAAG
CTGGAAATTATCACGCCGGACCGTGACTATGATTATTTCAGCCACATCAATCCGGGCCATGCGCCAGCGAATATGGCTAT
TCGCTTTACGCGCGACATTTTTTCAAACGAGAACAGCTGGCCGTTGCGCCTGCGCTTGATCAGTGAAGCCGAACTGGTGC
AGATCTTTATTGCCTGGACCAGCTCGTCCCACATTTGTCGCCAGGTCGAAAAATCCATTATCACATCACGCCTGGAGAAA
TGGCAATCGCTTCGCCAACCGCAGCCCGTCCCCGGCGTTACCGCTGAAGAGGTCGCGACCATCGCGAGTTTCTGGCGCTC
TTGTCTTCCGTCCGCCAGACAACATATTGATGATGCGACATGGCAACACTTTGCCTCGCTCTTGCCTGCGCTGGATCTCA
CGACACGGGCGCACGCCTGGGCATTACTGTGGGGAGAGCAACCGGAGATCACCCAGCAATGGCTGGCGCTGGCGCATATG
TTGCAACAAACCAGCCATGCCGGGGAACTGGCGGCGCCGCTCAGCCTGCTGGTCGATCATTTTGGCTTACCGGCGGAAAA
CTTCCTGACGCAAATGGCGCTAACCGCCAGCGATACGCAAAGCGATGTGGTGGTGCATCCGGTTAAGGAAGGCCGACTGC
TCAATGCGGTCAGCCTTTCGCTTGATTCTCTGGCGCTGCTTACCCGCGAACTGGTGCTAACCGTTGAAAACAGCGTACTG
GATAATGTTGATTTACTGGATATTCCGGTCGCGCCAGACAGTCATCCTCATCCGTTATGGCGGGCGAAATTAGGCTGGAT
GCTGGCCCATTACCGTCAACAGGTACAGCCCGATGTTCTGGTAATTTGCAATGCTCTGGCATCTCGCTCGCAAACATCCG
CCGCCGCCCGTCACTTACTGGAGTGGGTTAACGCCACGCAGCCGCAGCATGAATCAGCGTTACCCGGCGTCGTCTGGGCT
ATTACTCCACAGGATGCCCGTTTTGCCACCCAGCAAAATCTGGATGAAGCCGTCCAGCAGTTGATGGGTAAACCTGGCGT
GCATTGGGGAACGCTGCAGGCGCTGGATAAACACAGTATGCAGCGTTTGGTGGAATGGTTATCGCAGGCGACATCGGCAC
CACAGCGACAGGCGCGCTTACAGGCGTTACGCGAACAACTGCGAGGCCGCGTGCGCGATCTGTTACCGATGTTTGATGAC
GCGCAGCTACCGGTTGAAACCGTGATCCGGCGTCTTCAGGCCCAGGCCGCCAGACATGGCGACCTGCTGGCCGGGCTGTT
ACCGCCGGTACAGAACTTCGAAGCGTTGCTACGCACCCGACAGTCGCGAGAAGAACAGGTCAGCGGTTTATTTAATGACG
CGATCGATCTCTTTGCCGACGAACCAACGCGCGCTTCAGCGTCAGAAGGTCATGAAACAGGCTACCAGGCGCACAAAATG
TGGATCAATCATCTGCGCCAGTGGGCCCACTGCCGGGATAATGCGCAGCGTCTGGGTCTGGAACCGCAGATGCTCAACGC
CGTGGCGGAGATTTTAATTACCGCCAGCTATCGCCTCGGTTTACCTCAGCAGTTACAGAAAACCATGCAGCGCGAGGAGG
TGAGCGGCGCGCAGCTTCATGCCATCATTGGTAACTTCATCGCCTGGCTCGGCTACACAAATATCGAGGAGGCCCAACGC
CCGGCCAGCCGCGTTCAGAAAGGCGCAGCCATTTTCGCCGCAACGTCGCGTTCGACAATGTTGCGTCTAACAAAGCTTGA
CGAACAGCCCGTTCACGCCGCCAGCCGCTATGTCTATGACTGGCTTGTTGCGCTGTATACCCTGGCCAATGAGAACGCAG
GATATCGGCATCCGCAGGACGTTACCGACGTAGACAGAGAGCAATTAATTGCCCTGATAGCCTGA

Upstream 100 bases:

>100_bases
CGGTCGCCGCCGATGCGCTGACATTAAAATTGAATACGCTGGCTGACCGTCGCCACAGCGGCAGCCACTACTGGATAGAT
AGCGGGAGTGTATACCTGAA

Downstream 100 bases:

>100_bases
CCTGGCGGAAAAACCATGCCCGGTAACCTGTATCGGGCTTGAGGTCAGAAAAGCGAAAACAGCAACGCGACGGGGAAACT
TATCGGCCATGTCGCGCCAA

Product: putative virulence effector protein

Products: NA

Alternate protein names: Virulence Effector SrfC; Virulence Effector Protein; Virulence Protein; Protein Conserved In Bacteria Virulence Factor; Type III Effector Protein; Coiled-Coil Structure; Virulence Factor SrfC-Like Protein; Type III Secretion System Effector; HopL1 Protein; Virulence Factor SrfC

Number of amino acids: Translated: 714; Mature: 713

Protein sequence:

>714_residues
MTKPLNATQAVIEWVNNTRRYATRLDDEADALLAQLTLAAADESALNAACASHGCVGLYGYAQSAKAHLLTTLCGNENGK
LEIITPDRDYDYFSHINPGHAPANMAIRFTRDIFSNENSWPLRLRLISEAELVQIFIAWTSSSHICRQVEKSIITSRLEK
WQSLRQPQPVPGVTAEEVATIASFWRSCLPSARQHIDDATWQHFASLLPALDLTTRAHAWALLWGEQPEITQQWLALAHM
LQQTSHAGELAAPLSLLVDHFGLPAENFLTQMALTASDTQSDVVVHPVKEGRLLNAVSLSLDSLALLTRELVLTVENSVL
DNVDLLDIPVAPDSHPHPLWRAKLGWMLAHYRQQVQPDVLVICNALASRSQTSAAARHLLEWVNATQPQHESALPGVVWA
ITPQDARFATQQNLDEAVQQLMGKPGVHWGTLQALDKHSMQRLVEWLSQATSAPQRQARLQALREQLRGRVRDLLPMFDD
AQLPVETVIRRLQAQAARHGDLLAGLLPPVQNFEALLRTRQSREEQVSGLFNDAIDLFADEPTRASASEGHETGYQAHKM
WINHLRQWAHCRDNAQRLGLEPQMLNAVAEILITASYRLGLPQQLQKTMQREEVSGAQLHAIIGNFIAWLGYTNIEEAQR
PASRVQKGAAIFAATSRSTMLRLTKLDEQPVHAASRYVYDWLVALYTLANENAGYRHPQDVTDVDREQLIALIA

Sequences:

>Translated_714_residues
MTKPLNATQAVIEWVNNTRRYATRLDDEADALLAQLTLAAADESALNAACASHGCVGLYGYAQSAKAHLLTTLCGNENGK
LEIITPDRDYDYFSHINPGHAPANMAIRFTRDIFSNENSWPLRLRLISEAELVQIFIAWTSSSHICRQVEKSIITSRLEK
WQSLRQPQPVPGVTAEEVATIASFWRSCLPSARQHIDDATWQHFASLLPALDLTTRAHAWALLWGEQPEITQQWLALAHM
LQQTSHAGELAAPLSLLVDHFGLPAENFLTQMALTASDTQSDVVVHPVKEGRLLNAVSLSLDSLALLTRELVLTVENSVL
DNVDLLDIPVAPDSHPHPLWRAKLGWMLAHYRQQVQPDVLVICNALASRSQTSAAARHLLEWVNATQPQHESALPGVVWA
ITPQDARFATQQNLDEAVQQLMGKPGVHWGTLQALDKHSMQRLVEWLSQATSAPQRQARLQALREQLRGRVRDLLPMFDD
AQLPVETVIRRLQAQAARHGDLLAGLLPPVQNFEALLRTRQSREEQVSGLFNDAIDLFADEPTRASASEGHETGYQAHKM
WINHLRQWAHCRDNAQRLGLEPQMLNAVAEILITASYRLGLPQQLQKTMQREEVSGAQLHAIIGNFIAWLGYTNIEEAQR
PASRVQKGAAIFAATSRSTMLRLTKLDEQPVHAASRYVYDWLVALYTLANENAGYRHPQDVTDVDREQLIALIA
>Mature_713_residues
TKPLNATQAVIEWVNNTRRYATRLDDEADALLAQLTLAAADESALNAACASHGCVGLYGYAQSAKAHLLTTLCGNENGKL
EIITPDRDYDYFSHINPGHAPANMAIRFTRDIFSNENSWPLRLRLISEAELVQIFIAWTSSSHICRQVEKSIITSRLEKW
QSLRQPQPVPGVTAEEVATIASFWRSCLPSARQHIDDATWQHFASLLPALDLTTRAHAWALLWGEQPEITQQWLALAHML
QQTSHAGELAAPLSLLVDHFGLPAENFLTQMALTASDTQSDVVVHPVKEGRLLNAVSLSLDSLALLTRELVLTVENSVLD
NVDLLDIPVAPDSHPHPLWRAKLGWMLAHYRQQVQPDVLVICNALASRSQTSAAARHLLEWVNATQPQHESALPGVVWAI
TPQDARFATQQNLDEAVQQLMGKPGVHWGTLQALDKHSMQRLVEWLSQATSAPQRQARLQALREQLRGRVRDLLPMFDDA
QLPVETVIRRLQAQAARHGDLLAGLLPPVQNFEALLRTRQSREEQVSGLFNDAIDLFADEPTRASASEGHETGYQAHKMW
INHLRQWAHCRDNAQRLGLEPQMLNAVAEILITASYRLGLPQQLQKTMQREEVSGAQLHAIIGNFIAWLGYTNIEEAQRP
ASRVQKGAAIFAATSRSTMLRLTKLDEQPVHAASRYVYDWLVALYTLANENAGYRHPQDVTDVDREQLIALIA

Specific function: Unknown

COG id: COG4458

COG function: function code S; Uncharacterized protein conserved in bacteria, putative virulence factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79695; Mature: 79564

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKPLNATQAVIEWVNNTRRYATRLDDEADALLAQLTLAAADESALNAACASHGCVGLYG
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEECC
YAQSAKAHLLTTLCGNENGKLEIITPDRDYDYFSHINPGHAPANMAIRFTRDIFSNENSW
CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCCCHHHHEEHHHHHCCCCCC
PLRLRLISEAELVQIFIAWTSSSHICRQVEKSIITSRLEKWQSLRQPQPVPGVTAEEVAT
CEEEEEECHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
IASFWRSCLPSARQHIDDATWQHFASLLPALDLTTRAHAWALLWGEQPEITQQWLALAHM
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHH
LQQTSHAGELAAPLSLLVDHFGLPAENFLTQMALTASDTQSDVVVHPVKEGRLLNAVSLS
HHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHH
LDSLALLTRELVLTVENSVLDNVDLLDIPVAPDSHPHPLWRAKLGWMLAHYRQQVQPDVL
HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHH
VICNALASRSQTSAAARHLLEWVNATQPQHESALPGVVWAITPQDARFATQQNLDEAVQQ
HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHCCHHHHHHH
LMGKPGVHWGTLQALDKHSMQRLVEWLSQATSAPQRQARLQALREQLRGRVRDLLPMFDD
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
AQLPVETVIRRLQAQAARHGDLLAGLLPPVQNFEALLRTRQSREEQVSGLFNDAIDLFAD
CCCCHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EPTRASASEGHETGYQAHKMWINHLRQWAHCRDNAQRLGLEPQMLNAVAEILITASYRLG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
LPQQLQKTMQREEVSGAQLHAIIGNFIAWLGYTNIEEAQRPASRVQKGAAIFAATSRSTM
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCHHH
LRLTKLDEQPVHAASRYVYDWLVALYTLANENAGYRHPQDVTDVDREQLIALIA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHHHHCC
>Mature Secondary Structure 
TKPLNATQAVIEWVNNTRRYATRLDDEADALLAQLTLAAADESALNAACASHGCVGLYG
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEECC
YAQSAKAHLLTTLCGNENGKLEIITPDRDYDYFSHINPGHAPANMAIRFTRDIFSNENSW
CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHCCCCCCCCCHHHHEEHHHHHCCCCCC
PLRLRLISEAELVQIFIAWTSSSHICRQVEKSIITSRLEKWQSLRQPQPVPGVTAEEVAT
CEEEEEECHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
IASFWRSCLPSARQHIDDATWQHFASLLPALDLTTRAHAWALLWGEQPEITQQWLALAHM
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHH
LQQTSHAGELAAPLSLLVDHFGLPAENFLTQMALTASDTQSDVVVHPVKEGRLLNAVSLS
HHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHH
LDSLALLTRELVLTVENSVLDNVDLLDIPVAPDSHPHPLWRAKLGWMLAHYRQQVQPDVL
HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHH
VICNALASRSQTSAAARHLLEWVNATQPQHESALPGVVWAITPQDARFATQQNLDEAVQQ
HHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHCCHHHHHHH
LMGKPGVHWGTLQALDKHSMQRLVEWLSQATSAPQRQARLQALREQLRGRVRDLLPMFDD
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
AQLPVETVIRRLQAQAARHGDLLAGLLPPVQNFEALLRTRQSREEQVSGLFNDAIDLFAD
CCCCHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EPTRASASEGHETGYQAHKMWINHLRQWAHCRDNAQRLGLEPQMLNAVAEILITASYRLG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
LPQQLQKTMQREEVSGAQLHAIIGNFIAWLGYTNIEEAQRPASRVQKGAAIFAATSRSTM
CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCHHH
LRLTKLDEQPVHAASRYVYDWLVALYTLANENAGYRHPQDVTDVDREQLIALIA
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA