Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
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Accession | NC_011094 |
Length | 4,709,075 |
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The map label for this gene is 194737756
Identifier: 194737756
GI number: 194737756
Start: 1314194
End: 1314787
Strand: Direct
Name: 194737756
Synonym: SeSA_A1355
Alternate gene names: NA
Gene position: 1314194-1314787 (Clockwise)
Preceding gene: 194734256
Following gene: 194737264
Centisome position: 27.91
GC content: 36.36
Gene sequence:
>594_bases ATGACTGGTTCCGCATCATCTGTTTTAAAGACAGATACAAGACTATTGAGCGAAAACCTGTTTCTTAATTATGGTCTGGA GTCCTTATTTAAGGACGTCGCAATAATAGCTGGTAACGTAAATTATATTATTTTTGATATCGACGATTACTACACCGTAC AGCAGTATATTACTTCCACATTTAAAACGGTACTCATTGGAATTGTTACCCATAATGAATATAACTTTATTGATGAACAT CATGCTATATATCGAATAAAGGTCGATGCCTCTATTGCTGAGTGGCGTGAGTTACTGATTTTGGCCGCTGCTGGTCAATT TTTCCCCAGGTCAGAGAAAGTCAGATTAACGGCGAATGAAAGAAATGTTTTGGCGATGCTTGTTAAAGGAATGGATATCC GACAAATAAGCTGTGAGCTGAATGTACATTTAAAAACTATTTACTCAGTACGCTACCATGTTCTGACTAAATTAGGTTGT AGAACAGTTCTGGATTATCAAATACTGTCCGTCTCTAAAGCCTTTACGCACTGGCTGACAATAAATAATGTCGATAATGT AATTTCACGTGTAAATAGTAAGGTCATTGCTTAA
Upstream 100 bases:
>100_bases ACTACTACTTAATAGGTTCTCATCGCTGAAGTAAGCAGATGATCTTATGCGGGCCATCGAATGGATATTCCCACATGGCT CTCGTTTTGTTGAGGTGGAT
Downstream 100 bases:
>100_bases TAATGATTTGCTTCTGATGGCGTTTAGGTTCACTATGCTTTCTTACATCATCATGAGGCCAGACAGGCATGGCTACTTTT AGTATTAGCGCAATGGCGGC
Product: putative regulatory protein
Products: NA
Alternate protein names: LuxR Transcriptional Regulator
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MTGSASSVLKTDTRLLSENLFLNYGLESLFKDVAIIAGNVNYIIFDIDDYYTVQQYITSTFKTVLIGIVTHNEYNFIDEH HAIYRIKVDASIAEWRELLILAAAGQFFPRSEKVRLTANERNVLAMLVKGMDIRQISCELNVHLKTIYSVRYHVLTKLGC RTVLDYQILSVSKAFTHWLTINNVDNVISRVNSKVIA
Sequences:
>Translated_197_residues MTGSASSVLKTDTRLLSENLFLNYGLESLFKDVAIIAGNVNYIIFDIDDYYTVQQYITSTFKTVLIGIVTHNEYNFIDEH HAIYRIKVDASIAEWRELLILAAAGQFFPRSEKVRLTANERNVLAMLVKGMDIRQISCELNVHLKTIYSVRYHVLTKLGC RTVLDYQILSVSKAFTHWLTINNVDNVISRVNSKVIA >Mature_196_residues TGSASSVLKTDTRLLSENLFLNYGLESLFKDVAIIAGNVNYIIFDIDDYYTVQQYITSTFKTVLIGIVTHNEYNFIDEHH AIYRIKVDASIAEWRELLILAAAGQFFPRSEKVRLTANERNVLAMLVKGMDIRQISCELNVHLKTIYSVRYHVLTKLGCR TVLDYQILSVSKAFTHWLTINNVDNVISRVNSKVIA
Specific function: Unknown
COG id: COG2771
COG function: function code K; DNA-binding HTH domain-containing proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22481; Mature: 22350
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGSASSVLKTDTRLLSENLFLNYGLESLFKDVAIIAGNVNYIIFDIDDYYTVQQYITST CCCCCHHHHHHHHHHHHHHHEEECCHHHHHHHHEEEECCCEEEEEECCCHHHHHHHHHHH FKTVLIGIVTHNEYNFIDEHHAIYRIKVDASIAEWRELLILAAAGQFFPRSEKVRLTANE HHHHHEEEEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHEECCCCCCCCCCEEEEECC RNVLAMLVKGMDIRQISCELNVHLKTIYSVRYHVLTKLGCRTVLDYQILSVSKAFTHWLT CCEEHHHHCCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE INNVDNVISRVNSKVIA ECCHHHHHHHHHHHCCC >Mature Secondary Structure TGSASSVLKTDTRLLSENLFLNYGLESLFKDVAIIAGNVNYIIFDIDDYYTVQQYITST CCCCHHHHHHHHHHHHHHHEEECCHHHHHHHHEEEECCCEEEEEECCCHHHHHHHHHHH FKTVLIGIVTHNEYNFIDEHHAIYRIKVDASIAEWRELLILAAAGQFFPRSEKVRLTANE HHHHHEEEEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHEECCCCCCCCCCEEEEECC RNVLAMLVKGMDIRQISCELNVHLKTIYSVRYHVLTKLGCRTVLDYQILSVSKAFTHWLT CCEEHHHHCCCCEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE INNVDNVISRVNSKVIA ECCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA