Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
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Accession | NC_011094 |
Length | 4,709,075 |
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The map label for this gene is malI [H]
Identifier: 194737753
GI number: 194737753
Start: 1505566
End: 1506594
Strand: Direct
Name: malI [H]
Synonym: SeSA_A1564
Alternate gene names: 194737753
Gene position: 1505566-1506594 (Clockwise)
Preceding gene: 194735214
Following gene: 194735303
Centisome position: 31.97
GC content: 58.41
Gene sequence:
>1029_bases ATGGCTATCGCCAAAAAAATCACTATCCACGATGTTGCGCTGGCGGCTGGCGTGTCGGTGAGCACCGTTTCCTTAGTGCT GAGCGGCAAGGGGCGAATATCGGCCGCGACCGGCGAGCGCGTGAACGCGGCAATTGAACAACTGGGTTTTGTGCGTAACC GCCAGGCGTCCGCGCTGCGTGGCGGGCAAAGCGGCGTTATCGGTTTGATCGTGCGTGATTTATCGGCACCCTTTTATGCC GAATTGACCGCCGGGTTAACGGAAGCGCTGGAAGCGCAAGGCCGTATGGTTTTTCTCCTGCACGGGGGGAAAGATGGCGA ACAGCTAAATCAGCGTTTTACCATGCTGCTTAATCAGGGCGTGGATGGCATGGTGATCGCCGGTGCGGCGGGTAGTAGCG AAGCGCTGAGAGCGCAGGCCGACGCACAAGGAATTCCGGTGGTGTTTGCGTCACGCGCCAGCTATCTTGATGATGCGGAT ACCGTTCGGCCTGACAACATGCAGGCGGCGCAGCTCCTGACGGAGTACCTTATTCGTCAGGGCCATCAGCGCATCGCCTG GCTGGGAGGACAAAGCGCATCTTTAACCCGCGCGGAGCGCGTGGGCGGCTATTGCGCGACGTTGTTAAAATACGGTCTAC CGTTTCACAGCGAGTGGGTCGTGGAATGCGCTTCCAGTCAGAAGCAGGCAGCAGAAAGCATTACCGCGCTGTTGCGATAC AATCCGACCATTAGCGCTGTCGTTTGTTACAACGAAACCATTGCGATGGGGGCGTGGTTTGGCCTGCTGAGAGCCGGACG ACAGAGTGGCGAGAGCGGTGTCGATCGTTATTTCGAGCAGCAGGTGTCGCTGGCGGCGTTTGCTGATGTGGCGGAGAACG CCCTCGACGACCTGCCGATTATCTGGGCCAGTACGCCGGCGCGAGAAATAGGCTATACCCTGGCCGAACGAATATTGCAG CGTATTGCTCACGACGAGCACCATGTGCGGAGTCAAACGATAGCCGCTCGCCTGGTAACGCAAAAGTAG
Upstream 100 bases:
>100_bases TAGTGCGGCATTAATCACATTACTGACCGATAATAACGCGTATAAAGATAACGGATAGGTAAAACGTTTTATCTGTCAGA TTCTGGAGCGATTTGTTGAC
Downstream 100 bases:
>100_bases AGGCTGCGCGTCGTTCGGCGCAGACCGGGTGCAGCGTCGCGACACCCGGCAAGGCGATTATTGTTGAGGCAGCGCCGGAA CGTCCGGTACGGAAAGCGCT
Product: DNA-binding transcriptional repressor MalI
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MAIAKKITIHDVALAAGVSVSTVSLVLSGKGRISAATGERVNAAIEQLGFVRNRQASALRGGQSGVIGLIVRDLSAPFYA ELTAGLTEALEAQGRMVFLLHGGKDGEQLNQRFTMLLNQGVDGMVIAGAAGSSEALRAQADAQGIPVVFASRASYLDDAD TVRPDNMQAAQLLTEYLIRQGHQRIAWLGGQSASLTRAERVGGYCATLLKYGLPFHSEWVVECASSQKQAAESITALLRY NPTISAVVCYNETIAMGAWFGLLRAGRQSGESGVDRYFEQQVSLAAFADVAENALDDLPIIWASTPAREIGYTLAERILQ RIAHDEHHVRSQTIAARLVTQK
Sequences:
>Translated_342_residues MAIAKKITIHDVALAAGVSVSTVSLVLSGKGRISAATGERVNAAIEQLGFVRNRQASALRGGQSGVIGLIVRDLSAPFYA ELTAGLTEALEAQGRMVFLLHGGKDGEQLNQRFTMLLNQGVDGMVIAGAAGSSEALRAQADAQGIPVVFASRASYLDDAD TVRPDNMQAAQLLTEYLIRQGHQRIAWLGGQSASLTRAERVGGYCATLLKYGLPFHSEWVVECASSQKQAAESITALLRY NPTISAVVCYNETIAMGAWFGLLRAGRQSGESGVDRYFEQQVSLAAFADVAENALDDLPIIWASTPAREIGYTLAERILQ RIAHDEHHVRSQTIAARLVTQK >Mature_341_residues AIAKKITIHDVALAAGVSVSTVSLVLSGKGRISAATGERVNAAIEQLGFVRNRQASALRGGQSGVIGLIVRDLSAPFYAE LTAGLTEALEAQGRMVFLLHGGKDGEQLNQRFTMLLNQGVDGMVIAGAAGSSEALRAQADAQGIPVVFASRASYLDDADT VRPDNMQAAQLLTEYLIRQGHQRIAWLGGQSASLTRAERVGGYCATLLKYGLPFHSEWVVECASSQKQAAESITALLRYN PTISAVVCYNETIAMGAWFGLLRAGRQSGESGVDRYFEQQVSLAAFADVAENALDDLPIIWASTPAREIGYTLAERILQR IAHDEHHVRSQTIAARLVTQK
Specific function: Repressor for the malX and malY genes. Also regulates its own expression. Binds maltose as an inducer [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI1787906, Length=342, Percent_Identity=84.5029239766082, Blast_Score=602, Evalue=1e-173, Organism=Escherichia coli, GI48994940, Length=322, Percent_Identity=29.8136645962733, Blast_Score=114, Evalue=6e-27, Organism=Escherichia coli, GI1790194, Length=317, Percent_Identity=25.2365930599369, Blast_Score=112, Evalue=4e-26, Organism=Escherichia coli, GI1789068, Length=286, Percent_Identity=30.4195804195804, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1790369, Length=305, Percent_Identity=25.5737704918033, Blast_Score=108, Evalue=6e-25, Organism=Escherichia coli, GI1787580, Length=261, Percent_Identity=29.1187739463602, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1789202, Length=283, Percent_Identity=28.2685512367491, Blast_Score=96, Evalue=4e-21, Organism=Escherichia coli, GI1788474, Length=261, Percent_Identity=29.1187739463602, Blast_Score=95, Evalue=6e-21, Organism=Escherichia coli, GI1790715, Length=330, Percent_Identity=25.1515151515152, Blast_Score=91, Evalue=8e-20, Organism=Escherichia coli, GI1786540, Length=322, Percent_Identity=25.776397515528, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1790689, Length=286, Percent_Identity=26.5734265734266, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1787948, Length=336, Percent_Identity=23.2142857142857, Blast_Score=82, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000843 - InterPro: IPR010982 - InterPro: IPR001761 [H]
Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]
EC number: NA
Molecular weight: Translated: 36639; Mature: 36508
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: PS00356 HTH_LACI_1 ; PS50932 HTH_LACI_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIAKKITIHDVALAAGVSVSTVSLVLSGKGRISAATGERVNAAIEQLGFVRNRQASALR CCCCCEEEHHHHHHHCCCCHHEEEEEEECCCCEEECCCHHHHHHHHHHHHHHCCCHHHHC GGQSGVIGLIVRDLSAPFYAELTAGLTEALEAQGRMVFLLHGGKDGEQLNQRFTMLLNQG CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCC VDGMVIAGAAGSSEALRAQADAQGIPVVFASRASYLDDADTVRPDNMQAAQLLTEYLIRQ CCCEEEEECCCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHC GHQRIAWLGGQSASLTRAERVGGYCATLLKYGLPFHSEWVVECASSQKQAAESITALLRY CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC NPTISAVVCYNETIAMGAWFGLLRAGRQSGESGVDRYFEQQVSLAAFADVAENALDDLPI CCCEEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE IWASTPAREIGYTLAERILQRIAHDEHHVRSQTIAARLVTQK EEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure AIAKKITIHDVALAAGVSVSTVSLVLSGKGRISAATGERVNAAIEQLGFVRNRQASALR CCCCEEEHHHHHHHCCCCHHEEEEEEECCCCEEECCCHHHHHHHHHHHHHHCCCHHHHC GGQSGVIGLIVRDLSAPFYAELTAGLTEALEAQGRMVFLLHGGKDGEQLNQRFTMLLNQG CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCC VDGMVIAGAAGSSEALRAQADAQGIPVVFASRASYLDDADTVRPDNMQAAQLLTEYLIRQ CCCEEEEECCCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHC GHQRIAWLGGQSASLTRAERVGGYCATLLKYGLPFHSEWVVECASSQKQAAESITALLRY CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC NPTISAVVCYNETIAMGAWFGLLRAGRQSGESGVDRYFEQQVSLAAFADVAENALDDLPI CCCEEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE IWASTPAREIGYTLAERILQRIAHDEHHVRSQTIAARLVTQK EEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2670898; 1856179; 9097039; 9278503 [H]