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The map label for this gene is ydgJ [H]

Identifier: 194735214

GI number: 194735214

Start: 1500289

End: 1501329

Strand: Direct

Name: ydgJ [H]

Synonym: SeSA_A1560

Alternate gene names: 194735214

Gene position: 1500289-1501329 (Clockwise)

Preceding gene: 194736991

Following gene: 194737753

Centisome position: 31.86

GC content: 55.52

Gene sequence:

>1041_bases
ATGAATGACAAAATCCGCGTTGGGTTAATCGGTTATGGCTACGCCAGTAAAACCTTTCATGCGCCCTTAATTATGGGAAC
GCCAGGGCTAGAGCTTGCGGCGGTATCCAGCAGCGATGAAACAAAAGTGAAAGCAGACTGGCCGGCGGTTTCCGTGGTCT
CTGAGCCCCGACATTTATTTAACGATCCGCATATCGACCTGATCGTGATCCCGACGCCCAACGATACCCATTTCCCGCTG
GCGAAAGCTGCGCTGGAAGCCGGTAAGCATGTGGTGGTTGATAAACCCTTTACCGTGACACTGTCACAGGCGCGAGAATT
GGATGCGCTTGCGCGGAGCACTGGTCGGGTACTTTCCGTCTTCCACAACCGACGCTGGGACAGCGATTTTTTGACGCTGA
AGGCCTTGCTGGCGGATGGCGTGCTCGGCGAGGTGTCCTTGTTTGAATCCCACTTTGATCGCTTCCGTCCCCAGGTGCGC
GACCGCTGGCGCGAGCAAGGCGGGCCAGGAAGTGGTATCTGGTACGATCTGGCGCCGCACTTGTTGGATCAGGCCATTCA
ACTTTTTGGCCTGCCGGTCAGCATGACGGTGGATTTAGCGCAGCTGCGTCCGGGTGCGCAATCTACAGATTATTTCCACG
CGATTTTATCCTACCCCCAGCGCCGCGTGATTTTGCACGGTACGATGCTGGCCGCGGCGGAATCCGCGCGATACATCGTT
CATGGTTCGCGCGGTAGCTATGTAAAATATGGCCTCGATCCCCAGGAAGAACGGTTAAAAAACGGCGAGCGTTTACCGCA
GGAAGACTGGGGATACGACATGCGTGACGGCGTATTGACCCTGGTTGAGGGAGAGACGCGCAAAGAAGAGAACTGGCTTA
CGTTGCCGGGTAACTATCCGGCATATTATGCCGCCATCCGCGATGCGTTAAACGGTAACGGTGAAAATCCCGTGCCGGCA
AGCCAGGCGATTCAAATTATGGAGTTGATTGAACTGGGCATGGAATCGGCAAAACATCGCGCGACGCTGTGTCTTGCCTG
A

Upstream 100 bases:

>100_bases
AACAAGTTAATCATTTGATGCTACGTTGATGGTCAGGACGCTATTGCGGCTAATCGCACGATGGTGTGGAATAGCGATAT
CTAAAACCGGAGGCAGTGAG

Downstream 100 bases:

>100_bases
GATGTCGCATTTCTCCGCCTGTGATAGCATTAAACCGCAGGCGGAGAGAGGACGTCAGCATCAATAAAGCAATCTTACGC
CGCGGCCACTTTTTCGCGCA

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 346

Protein sequence:

>346_residues
MNDKIRVGLIGYGYASKTFHAPLIMGTPGLELAAVSSSDETKVKADWPAVSVVSEPRHLFNDPHIDLIVIPTPNDTHFPL
AKAALEAGKHVVVDKPFTVTLSQARELDALARSTGRVLSVFHNRRWDSDFLTLKALLADGVLGEVSLFESHFDRFRPQVR
DRWREQGGPGSGIWYDLAPHLLDQAIQLFGLPVSMTVDLAQLRPGAQSTDYFHAILSYPQRRVILHGTMLAAAESARYIV
HGSRGSYVKYGLDPQEERLKNGERLPQEDWGYDMRDGVLTLVEGETRKEENWLTLPGNYPAYYAAIRDALNGNGENPVPA
SQAIQIMELIELGMESAKHRATLCLA

Sequences:

>Translated_346_residues
MNDKIRVGLIGYGYASKTFHAPLIMGTPGLELAAVSSSDETKVKADWPAVSVVSEPRHLFNDPHIDLIVIPTPNDTHFPL
AKAALEAGKHVVVDKPFTVTLSQARELDALARSTGRVLSVFHNRRWDSDFLTLKALLADGVLGEVSLFESHFDRFRPQVR
DRWREQGGPGSGIWYDLAPHLLDQAIQLFGLPVSMTVDLAQLRPGAQSTDYFHAILSYPQRRVILHGTMLAAAESARYIV
HGSRGSYVKYGLDPQEERLKNGERLPQEDWGYDMRDGVLTLVEGETRKEENWLTLPGNYPAYYAAIRDALNGNGENPVPA
SQAIQIMELIELGMESAKHRATLCLA
>Mature_346_residues
MNDKIRVGLIGYGYASKTFHAPLIMGTPGLELAAVSSSDETKVKADWPAVSVVSEPRHLFNDPHIDLIVIPTPNDTHFPL
AKAALEAGKHVVVDKPFTVTLSQARELDALARSTGRVLSVFHNRRWDSDFLTLKALLADGVLGEVSLFESHFDRFRPQVR
DRWREQGGPGSGIWYDLAPHLLDQAIQLFGLPVSMTVDLAQLRPGAQSTDYFHAILSYPQRRVILHGTMLAAAESARYIV
HGSRGSYVKYGLDPQEERLKNGERLPQEDWGYDMRDGVLTLVEGETRKEENWLTLPGNYPAYYAAIRDALNGNGENPVPA
SQAIQIMELIELGMESAKHRATLCLA

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Escherichia coli, GI87081947, Length=346, Percent_Identity=92.485549132948, Blast_Score=648, Evalue=0.0,
Organism=Escherichia coli, GI1789848, Length=347, Percent_Identity=36.8876080691643, Blast_Score=202, Evalue=2e-53,
Organism=Escherichia coli, GI1787574, Length=208, Percent_Identity=29.3269230769231, Blast_Score=87, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6323975, Length=257, Percent_Identity=24.5136186770428, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 38407; Mature: 38407

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDKIRVGLIGYGYASKTFHAPLIMGTPGLELAAVSSSDETKVKADWPAVSVVSEPRHLF
CCCCEEEEEEEECCCCCCCCCCEEECCCCCEEEEECCCCCCEEEECCCEEEEHHCCHHHC
NDPHIDLIVIPTPNDTHFPLAKAALEAGKHVVVDKPFTVTLSQARELDALARSTGRVLSV
CCCCEEEEEEECCCCCCCHHHHHHHHCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHH
FHNRRWDSDFLTLKALLADGVLGEVSLFESHFDRFRPQVRDRWREQGGPGSGIWYDLAPH
HHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHH
LLDQAIQLFGLPVSMTVDLAQLRPGAQSTDYFHAILSYPQRRVILHGTMLAAAESARYIV
HHHHHHHHHCCCHHHEEEHHHCCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHCCCEEEE
HGSRGSYVKYGLDPQEERLKNGERLPQEDWGYDMRDGVLTLVEGETRKEENWLTLPGNYP
ECCCCCEEEECCCCHHHHHCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCCEEECCCCCC
AYYAAIRDALNGNGENPVPASQAIQIMELIELGMESAKHRATLCLA
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECC
>Mature Secondary Structure
MNDKIRVGLIGYGYASKTFHAPLIMGTPGLELAAVSSSDETKVKADWPAVSVVSEPRHLF
CCCCEEEEEEEECCCCCCCCCCEEECCCCCEEEEECCCCCCEEEECCCEEEEHHCCHHHC
NDPHIDLIVIPTPNDTHFPLAKAALEAGKHVVVDKPFTVTLSQARELDALARSTGRVLSV
CCCCEEEEEEECCCCCCCHHHHHHHHCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHH
FHNRRWDSDFLTLKALLADGVLGEVSLFESHFDRFRPQVRDRWREQGGPGSGIWYDLAPH
HHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCHHHHHHH
LLDQAIQLFGLPVSMTVDLAQLRPGAQSTDYFHAILSYPQRRVILHGTMLAAAESARYIV
HHHHHHHHHCCCHHHEEEHHHCCCCCCCHHHHHHHHHCCCCEEEEEHHHHHHHCCCEEEE
HGSRGSYVKYGLDPQEERLKNGERLPQEDWGYDMRDGVLTLVEGETRKEENWLTLPGNYP
ECCCCCEEEECCCCHHHHHCCCCCCCHHHCCCCCCCCEEEEEECCCCCCCCEEECCCCCC
AYYAAIRDALNGNGENPVPASQAIQIMELIELGMESAKHRATLCLA
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]