Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
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Accession | NC_011094 |
Length | 4,709,075 |
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The map label for this gene is treA [H]
Identifier: 194737640
GI number: 194737640
Start: 1873077
End: 1874789
Strand: Direct
Name: treA [H]
Synonym: SeSA_A1938
Alternate gene names: 194737640
Gene position: 1873077-1874789 (Clockwise)
Preceding gene: 194734885
Following gene: 194738062
Centisome position: 39.78
GC content: 55.58
Gene sequence:
>1713_bases ATGATACCCCCAGAGATTCGCCGTTCTGTTCTACTGCAGAAAGCCATAAAACTGGCGCTGGCAGGGACGCTGCTGACGTT TGCATCGTTTTCGGCGACTGCCGCAGACCCGTCTTCCGACACTGAAACTCCGCAGCCGCCGGATATTTTGCTTGGCCCGC TCTTTAATGATGTCCAGAATGCAAAACTCTTCCCCGATCAGAAAACCTTTGCTGACGCCATACCTAATAGCGATCCGCTC ATGATTCTTGCGGATTATCGTATGCAGCGGAACCAGTCCGGCTTCGATTTGCGTCATTTTGTTGATGTTAACTTCACCCT GCCGAAAGCGGGTGAAAAATATGTCCCGCCTGCCGGGCAGTCATTGCGTGAACATATTGATGGCCTGTGGCCGGTGCTGA CCCGTTCAACTAAAAACGTCGAAAAGTGGGACTCGCTCTTGCCGTTGCCTGAATCCTATGTCGTGCCGGGTGGGCGATTC AGAGAGATTTACTACTGGGACAGCTACTTTACGATGCTGGGGCTGGCGGAAAGCGGGCACTGGGATAAGGTGGCGGATAT GGTGGCGAACTTTGGTTACGAAATTGACGCCTGGGGGCATATTCCTAACGGCAACCGTACCTACTACCTGAGTCGTTCGC AGCCGCCTTTCTTTGCGTTTATGATTGAGTTACTGGCGCAACATGAAGGTGACGATGCGCTGAAAGAATACCTGCCGCAA CTGCAAAAAGAGTACGCCTACTGGATGGAGGGCGTTGAGACATTGCAGCCAGGGCAACAAAACCAACGCGTCGTCAAACT GGAAGACGGTAGCGTTCTCAACCGCTACTGGGACGATCGGGATACGCCCCGCCCTGAATCCTGGGTTGAAGATATCGCTA CCGCCAAAAGCAACCCCAACCGCCCGGCAACGGAGATCTATCGAGACCTCCGCTCTGCCGCCGCCTCCGGCTGGGATTTC AGCTCCCGCTGGATGGATAATCCGCAGCAGCTCAGTACCATCCGTACCACCACGATTGTCCCTGTCGATCTTAACGCTCT GCTGTATCAGCTGGAGAAAACCCTCGCCCGCGCCAGCGCTGCGGCGGGCGATCGGGCCGAAGCCTCGCAATATGACGCGC TGGCCAACGCGCGGCAAAAAGCCATTGAAATGCATCTGTGGAATAACAAAGAGGGTTGGTATGCCGACTACGATCTGCAG AACAATAAAATCCGTGACCAACTCACCGCTGCCGCGCTGTTCCCGCTCTATGTAAACGCCGCCGCGAAAGATCGCGCCGT GAAAGTGGCGGCGGCGGCCCAGGCGCATCTGCTACAGCCTGGCGGGCTGGCTACCACCTCGGTTAAAAGCGGACAGCAGT GGGATGCGCCAAACGGCTGGGCGCCGTTACAATGGGTCGCTGCCGAAGGATTACAAAATTATGGGCAGGATGACGTGGCA ATGGAAGTCACCTGGCGTTTTTTAACCAATGTGCAGCACACCTACGATCGCGAGAAAAAACTGGTCGAAAAATATGACGT CAGCAGTACCGGAACCGGCGGTGGCGGCGGCGAATATCCCCTTCAGGACGGCTTTGGCTGGACCAACGGCGTGACGCTGA AAATGCTCGATCTGATTTGTCCGCAGGAAAAACCGTGTGATAGCGTACCGTCTACTCGTCCGGCATCGTTAAGCGCAACG CCGACAAAAACGCCGTCTGCAGCGACGCAGTAA
Upstream 100 bases:
>100_bases GCAAAATAGCGGTTCAATCACGCGTATCTGGTCATCGTAGACTAAGGTTTTGTCATGGTAAATGCCGTTGGCTTTGGCTC ACCGCTAAGGAGATAACTTG
Downstream 100 bases:
>100_bases CGCGTGTTTATAGTAGGTTGACCCGGCGCTGACCGGGTCAACGCTTACACGTTCTGCAGCGGTTAGCCGCGTCGCAGAAG GCGGAAAATCACCAGCACCA
Product: trehalase
Products: NA
Alternate protein names: Alpha,alpha-trehalase; Alpha,alpha-trehalose glucohydrolase [H]
Number of amino acids: Translated: 570; Mature: 570
Protein sequence:
>570_residues MIPPEIRRSVLLQKAIKLALAGTLLTFASFSATAADPSSDTETPQPPDILLGPLFNDVQNAKLFPDQKTFADAIPNSDPL MILADYRMQRNQSGFDLRHFVDVNFTLPKAGEKYVPPAGQSLREHIDGLWPVLTRSTKNVEKWDSLLPLPESYVVPGGRF REIYYWDSYFTMLGLAESGHWDKVADMVANFGYEIDAWGHIPNGNRTYYLSRSQPPFFAFMIELLAQHEGDDALKEYLPQ LQKEYAYWMEGVETLQPGQQNQRVVKLEDGSVLNRYWDDRDTPRPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDF SSRWMDNPQQLSTIRTTTIVPVDLNALLYQLEKTLARASAAAGDRAEASQYDALANARQKAIEMHLWNNKEGWYADYDLQ NNKIRDQLTAAALFPLYVNAAAKDRAVKVAAAAQAHLLQPGGLATTSVKSGQQWDAPNGWAPLQWVAAEGLQNYGQDDVA MEVTWRFLTNVQHTYDREKKLVEKYDVSSTGTGGGGGEYPLQDGFGWTNGVTLKMLDLICPQEKPCDSVPSTRPASLSAT PTKTPSAATQ
Sequences:
>Translated_570_residues MIPPEIRRSVLLQKAIKLALAGTLLTFASFSATAADPSSDTETPQPPDILLGPLFNDVQNAKLFPDQKTFADAIPNSDPL MILADYRMQRNQSGFDLRHFVDVNFTLPKAGEKYVPPAGQSLREHIDGLWPVLTRSTKNVEKWDSLLPLPESYVVPGGRF REIYYWDSYFTMLGLAESGHWDKVADMVANFGYEIDAWGHIPNGNRTYYLSRSQPPFFAFMIELLAQHEGDDALKEYLPQ LQKEYAYWMEGVETLQPGQQNQRVVKLEDGSVLNRYWDDRDTPRPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDF SSRWMDNPQQLSTIRTTTIVPVDLNALLYQLEKTLARASAAAGDRAEASQYDALANARQKAIEMHLWNNKEGWYADYDLQ NNKIRDQLTAAALFPLYVNAAAKDRAVKVAAAAQAHLLQPGGLATTSVKSGQQWDAPNGWAPLQWVAAEGLQNYGQDDVA MEVTWRFLTNVQHTYDREKKLVEKYDVSSTGTGGGGGEYPLQDGFGWTNGVTLKMLDLICPQEKPCDSVPSTRPASLSAT PTKTPSAATQ >Mature_570_residues MIPPEIRRSVLLQKAIKLALAGTLLTFASFSATAADPSSDTETPQPPDILLGPLFNDVQNAKLFPDQKTFADAIPNSDPL MILADYRMQRNQSGFDLRHFVDVNFTLPKAGEKYVPPAGQSLREHIDGLWPVLTRSTKNVEKWDSLLPLPESYVVPGGRF REIYYWDSYFTMLGLAESGHWDKVADMVANFGYEIDAWGHIPNGNRTYYLSRSQPPFFAFMIELLAQHEGDDALKEYLPQ LQKEYAYWMEGVETLQPGQQNQRVVKLEDGSVLNRYWDDRDTPRPESWVEDIATAKSNPNRPATEIYRDLRSAAASGWDF SSRWMDNPQQLSTIRTTTIVPVDLNALLYQLEKTLARASAAAGDRAEASQYDALANARQKAIEMHLWNNKEGWYADYDLQ NNKIRDQLTAAALFPLYVNAAAKDRAVKVAAAAQAHLLQPGGLATTSVKSGQQWDAPNGWAPLQWVAAEGLQNYGQDDVA MEVTWRFLTNVQHTYDREKKLVEKYDVSSTGTGGGGGEYPLQDGFGWTNGVTLKMLDLICPQEKPCDSVPSTRPASLSAT PTKTPSAATQ
Specific function: Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system [H]
COG id: COG1626
COG function: function code G; Neutral trehalase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 37 family [H]
Homologues:
Organism=Homo sapiens, GI116284412, Length=548, Percent_Identity=34.1240875912409, Blast_Score=262, Evalue=6e-70, Organism=Escherichia coli, GI1787447, Length=546, Percent_Identity=82.7838827838828, Blast_Score=941, Evalue=0.0, Organism=Escherichia coli, GI1789936, Length=504, Percent_Identity=51.3888888888889, Blast_Score=516, Evalue=1e-147, Organism=Caenorhabditis elegans, GI17542196, Length=524, Percent_Identity=33.206106870229, Blast_Score=267, Evalue=1e-71, Organism=Caenorhabditis elegans, GI25141398, Length=529, Percent_Identity=32.1361058601134, Blast_Score=238, Evalue=5e-63, Organism=Caenorhabditis elegans, GI25148109, Length=561, Percent_Identity=30.6595365418895, Blast_Score=236, Evalue=3e-62, Organism=Caenorhabditis elegans, GI17565078, Length=547, Percent_Identity=31.4442413162706, Blast_Score=235, Evalue=5e-62, Organism=Caenorhabditis elegans, GI71987755, Length=403, Percent_Identity=29.2803970223325, Blast_Score=182, Evalue=3e-46, Organism=Saccharomyces cerevisiae, GI6320204, Length=435, Percent_Identity=29.4252873563218, Blast_Score=149, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6319473, Length=445, Percent_Identity=29.438202247191, Blast_Score=141, Evalue=2e-34, Organism=Drosophila melanogaster, GI24656661, Length=549, Percent_Identity=35.5191256830601, Blast_Score=279, Evalue=4e-75, Organism=Drosophila melanogaster, GI17933716, Length=549, Percent_Identity=35.5191256830601, Blast_Score=279, Evalue=4e-75, Organism=Drosophila melanogaster, GI24656670, Length=549, Percent_Identity=35.5191256830601, Blast_Score=279, Evalue=4e-75, Organism=Drosophila melanogaster, GI24656680, Length=528, Percent_Identity=35.7954545454545, Blast_Score=277, Evalue=2e-74, Organism=Drosophila melanogaster, GI24656675, Length=528, Percent_Identity=35.7954545454545, Blast_Score=277, Evalue=2e-74, Organism=Drosophila melanogaster, GI24656685, Length=502, Percent_Identity=35.2589641434263, Blast_Score=258, Evalue=6e-69, Organism=Drosophila melanogaster, GI22024178, Length=527, Percent_Identity=30.9297912713473, Blast_Score=229, Evalue=3e-60, Organism=Drosophila melanogaster, GI45551104, Length=367, Percent_Identity=31.8801089918256, Blast_Score=170, Evalue=3e-42, Organism=Drosophila melanogaster, GI28573474, Length=314, Percent_Identity=27.7070063694268, Blast_Score=116, Evalue=5e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR001661 - InterPro: IPR018232 [H]
Pfam domain/function: PF01204 Trehalase [H]
EC number: =3.2.1.28 [H]
Molecular weight: Translated: 63621; Mature: 63621
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS00927 TREHALASE_1 ; PS00928 TREHALASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPPEIRRSVLLQKAIKLALAGTLLTFASFSATAADPSSDTETPQPPDILLGPLFNDVQN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECHHHHHHHC AKLFPDQKTFADAIPNSDPLMILADYRMQRNQSGFDLRHFVDVNFTLPKAGEKYVPPAGQ CCCCCCHHHHHHHCCCCCCEEEEECCHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCH SLREHIDGLWPVLTRSTKNVEKWDSLLPLPESYVVPGGRFREIYYWDSYFTMLGLAESGH HHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECHHHHHHHCCCCCC WDKVADMVANFGYEIDAWGHIPNGNRTYYLSRSQPPFFAFMIELLAQHEGDDALKEYLPQ HHHHHHHHHHCCCEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHH LQKEYAYWMEGVETLQPGQQNQRVVKLEDGSVLNRYWDDRDTPRPESWVEDIATAKSNPN HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCC RPATEIYRDLRSAAASGWDFSSRWMDNPQQLSTIRTTTIVPVDLNALLYQLEKTLARASA CCHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHEEEEEEECHHHHHHHHHHHHHHHHH AAGDRAEASQYDALANARQKAIEMHLWNNKEGWYADYDLQNNKIRDQLTAAALFPLYVNA CCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCC AAKDRAVKVAAAAQAHLLQPGGLATTSVKSGQQWDAPNGWAPLQWVAAEGLQNYGQDDVA CCCCHHEEHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHH MEVTWRFLTNVQHTYDREKKLVEKYDVSSTGTGGGGGEYPLQDGFGWTNGVTLKMLDLIC HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC PQEKPCDSVPSTRPASLSATPTKTPSAATQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIPPEIRRSVLLQKAIKLALAGTLLTFASFSATAADPSSDTETPQPPDILLGPLFNDVQN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECHHHHHHHC AKLFPDQKTFADAIPNSDPLMILADYRMQRNQSGFDLRHFVDVNFTLPKAGEKYVPPAGQ CCCCCCHHHHHHHCCCCCCEEEEECCHHHCCCCCCCEEEEEEEEEECCCCCCCCCCCCCH SLREHIDGLWPVLTRSTKNVEKWDSLLPLPESYVVPGGRFREIYYWDSYFTMLGLAESGH HHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECHHHHHHHCCCCCC WDKVADMVANFGYEIDAWGHIPNGNRTYYLSRSQPPFFAFMIELLAQHEGDDALKEYLPQ HHHHHHHHHHCCCEEECCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHH LQKEYAYWMEGVETLQPGQQNQRVVKLEDGSVLNRYWDDRDTPRPESWVEDIATAKSNPN HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHCCCCCCCCHHHHHHHHHHHCCCCC RPATEIYRDLRSAAASGWDFSSRWMDNPQQLSTIRTTTIVPVDLNALLYQLEKTLARASA CCHHHHHHHHHHHHCCCCCCHHHHCCCHHHHHHHHEEEEEEECHHHHHHHHHHHHHHHHH AAGDRAEASQYDALANARQKAIEMHLWNNKEGWYADYDLQNNKIRDQLTAAALFPLYVNA CCCCCHHHHHHHHHHHHHHHHEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCC AAKDRAVKVAAAAQAHLLQPGGLATTSVKSGQQWDAPNGWAPLQWVAAEGLQNYGQDDVA CCCCHHEEHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHH MEVTWRFLTNVQHTYDREKKLVEKYDVSSTGTGGGGGEYPLQDGFGWTNGVTLKMLDLIC HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHC PQEKPCDSVPSTRPASLSATPTKTPSAATQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA