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The map label for this gene is ygbE [H]

Identifier: 194736877

GI number: 194736877

Start: 2977314

End: 2977592

Strand: Reverse

Name: ygbE [H]

Synonym: SeSA_A3083

Alternate gene names: 194736877

Gene position: 2977592-2977314 (Counterclockwise)

Preceding gene: 194735437

Following gene: 194736412

Centisome position: 63.23

GC content: 50.18

Gene sequence:

>279_bases
ATGGTCGACGATGACGCCACCAGTGCATTTCCGGGGGCGGTGGTCGGCTTTGTGTCATGGCTGCTGGCGTTGGGGATCCC
TTTTCTGCTTTATGGCCCTAACACGCTGTTTTTTTTCCTCTATACCTGGCCCTTTTTCCTCGCGTTAATGCCGGTATCGG
TGATTATCGGCATTGCGTTGCATTTGCTGGTAAAGGGCAAAATACTTTTTAGCATCATGTTTACTCTACTGGTCGTAGGC
GCGCTGTTCGGCGCGTTATTTATATGGCTATTAGGGTAG

Upstream 100 bases:

>100_bases
CCTGAGACACCACCGGGCTTGTATGCCCGGTATGGTCAAGGTTACAGGATTTAATATGCGTAATAGCCATAACATTACTT
TCACAAGGTCAGACGCCTTC

Downstream 100 bases:

>100_bases
ACGGGTTATCACTGCGCCTCCGGTCATAATTCAAACCGTAACCAACAATGAGATTATGTTCTCCTTACTCGGGTATACGT
AACATCCGGCAAATGTGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 92; Mature: 92

Protein sequence:

>92_residues
MVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLVVG
ALFGALFIWLLG

Sequences:

>Translated_92_residues
MVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLVVG
ALFGALFIWLLG
>Mature_92_residues
MVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIALHLLVKGKILFSIMFTLLVVG
ALFGALFIWLLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789106, Length=90, Percent_Identity=67.7777777777778, Blast_Score=129, Evalue=3e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022721 [H]

Pfam domain/function: PF12084 DUF3561 [H]

EC number: NA

Molecular weight: Translated: 10070; Mature: 10070

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIAL
CCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLLVKGKILFSIMFTLLVVGALFGALFIWLLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVDDDATSAFPGAVVGFVSWLLALGIPFLLYGPNTLFFFLYTWPFFLALMPVSVIIGIAL
CCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HLLVKGKILFSIMFTLLVVGALFGALFIWLLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503; 1316900; 7567469 [H]