Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
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Accession | NC_011094 |
Length | 4,709,075 |
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The map label for this gene is chuR [H]
Identifier: 194736621
GI number: 194736621
Start: 1331904
End: 1333100
Strand: Direct
Name: chuR [H]
Synonym: SeSA_A1381
Alternate gene names: 194736621
Gene position: 1331904-1333100 (Clockwise)
Preceding gene: 194736133
Following gene: 194734501
Centisome position: 28.28
GC content: 49.54
Gene sequence:
>1197_bases ATGAGCATAGTATTCAATACCGTAGCCAAGCCCAGCGGCAGTCTGTGTAACTTATCCTGCAAGTACTGTTTCTATCTTGA TAAACCCCGGGGCCAGCGCGTCATGTCTGACGATGTGCTGGAGACGTATATCCGCCGGGTAATTGATGATACGCCATCCT CAGAGGTCTCGTTTTGTTGGCAGGGGGGAGAGCCGACGCTATGCGGTCTTTCTTTTTACCAAAAAGTGGTGCGCTTGCAG CAACGCTATGCCAACGGCAAAACTATTTACAACAGTCTGCAAACCAATGGCGTATTAATCAATGAAGAATGGGCGGCTTT CTTTGCGCAGCACCAGTTCCTGATTGGTATATCGATTGATGGGCCGCAAGTCGTTCATGATAATTACCGGAAAACGCCGT CAGGGCGGGCGTCTTTTTCCCGTGTCGTTAATGCTATCCGCCTTCTGCAGGCAAATGATGTCGAGTTCAACACGCTCACT GTCGTGAATGATGTGTCATGCCGTCATGGCAACGCTATTTATCATTTTTTGACGCAGGAATTGGAAAGTAAACACCTGCA ATTTATTCCCATTGTTGAGCCGCTCGCGCAAAAAACGCAGCGTTCTTTGACGTTATCTGACAATGAGGATTCGCCTTCGC TGATGCCCTTTTCCGTCACGCCTGAAGGGTGGGGCGCCTTTATGTGCGATGTTTTTGATCAATGGATACGTCACGATGTC GGACGCATATTCGTACAGCTTTTTGACAACTTACTTGGCGTCTGGATGGGGGAGCCCGCCACGCTTTGTACGATGCAGTC GACCTGCGGGCAAAGTTTGCTGGTGGAGCAGAATGGCGACGTGTTTAGCTGTGACCATTTTGTTTTTCCCGCCTATAAAC TGGGCAATCTGCAGCAACACTCTTTAGAAGAAATGGCGGCTTCTTCTTTTCAGCAGCAGTTTGGCGCGGCTAAAGCAAAC CTTTCCTCACGCTGCCAGAACTGTACGTGGCGCTTTGCCTGTCACGGCGGTTGTCCGAAACATCGAATTTGCATGGACGG CGGCGAACGGCAAAATTATCTCTGTAAAGGATATCTGGAGTTCTTTCAACATGTGACGCCCTATATGAATGTGATGCGTC AATTATTACTGAATCAGCGACCCGCCGCGCATATTACCCGCATCGTCGACATGATTGCGGATGACGTTCGTCAGTGA
Upstream 100 bases:
>100_bases CTGCGCTAACAATTAGCGTAATAATTGTTGCAATGCTGGCTGATATCGCCCTGTCACGTCCCGCTTATGCTATACCCATT CTTCACAGCGAGTAAGACGA
Downstream 100 bases:
>100_bases CAAGAAAATCGCCCCCTTGCGCGGTATGATGCCGGACATTACCGTAGGGTCTAAGAGTCCTGTATTGTTTTACCGTCGAG TGACATTGAAAAGGAAATGA
Product: chondroitin sulfate/heparin utilization regulation protein
Products: NA
Alternate protein names: AnSME; Chondroitin sulfate/heparin utilization regulation protein; Ser-type sulfatase-activating enzyme [H]
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MSIVFNTVAKPSGSLCNLSCKYCFYLDKPRGQRVMSDDVLETYIRRVIDDTPSSEVSFCWQGGEPTLCGLSFYQKVVRLQ QRYANGKTIYNSLQTNGVLINEEWAAFFAQHQFLIGISIDGPQVVHDNYRKTPSGRASFSRVVNAIRLLQANDVEFNTLT VVNDVSCRHGNAIYHFLTQELESKHLQFIPIVEPLAQKTQRSLTLSDNEDSPSLMPFSVTPEGWGAFMCDVFDQWIRHDV GRIFVQLFDNLLGVWMGEPATLCTMQSTCGQSLLVEQNGDVFSCDHFVFPAYKLGNLQQHSLEEMAASSFQQQFGAAKAN LSSRCQNCTWRFACHGGCPKHRICMDGGERQNYLCKGYLEFFQHVTPYMNVMRQLLLNQRPAAHITRIVDMIADDVRQ
Sequences:
>Translated_398_residues MSIVFNTVAKPSGSLCNLSCKYCFYLDKPRGQRVMSDDVLETYIRRVIDDTPSSEVSFCWQGGEPTLCGLSFYQKVVRLQ QRYANGKTIYNSLQTNGVLINEEWAAFFAQHQFLIGISIDGPQVVHDNYRKTPSGRASFSRVVNAIRLLQANDVEFNTLT VVNDVSCRHGNAIYHFLTQELESKHLQFIPIVEPLAQKTQRSLTLSDNEDSPSLMPFSVTPEGWGAFMCDVFDQWIRHDV GRIFVQLFDNLLGVWMGEPATLCTMQSTCGQSLLVEQNGDVFSCDHFVFPAYKLGNLQQHSLEEMAASSFQQQFGAAKAN LSSRCQNCTWRFACHGGCPKHRICMDGGERQNYLCKGYLEFFQHVTPYMNVMRQLLLNQRPAAHITRIVDMIADDVRQ >Mature_397_residues SIVFNTVAKPSGSLCNLSCKYCFYLDKPRGQRVMSDDVLETYIRRVIDDTPSSEVSFCWQGGEPTLCGLSFYQKVVRLQQ RYANGKTIYNSLQTNGVLINEEWAAFFAQHQFLIGISIDGPQVVHDNYRKTPSGRASFSRVVNAIRLLQANDVEFNTLTV VNDVSCRHGNAIYHFLTQELESKHLQFIPIVEPLAQKTQRSLTLSDNEDSPSLMPFSVTPEGWGAFMCDVFDQWIRHDVG RIFVQLFDNLLGVWMGEPATLCTMQSTCGQSLLVEQNGDVFSCDHFVFPAYKLGNLQQHSLEEMAASSFQQQFGAAKANL SSRCQNCTWRFACHGGCPKHRICMDGGERQNYLCKGYLEFFQHVTPYMNVMRQLLLNQRPAAHITRIVDMIADDVRQ
Specific function: Involved in 'Ser-type' sulfatase maturation under anaerobic conditions. Links the heparin and the chondroitin sulfate utilization pathways which contribute to the colonization of the intestinal tract. May catalyze the activation of chondro-6- sulfatase, i
COG id: COG0641
COG function: function code R; Arylsulfatase regulator (Fe-S oxidoreductase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the radical SAM superfamily. Anaerobic sulfatase-maturating enzyme family [H]
Homologues:
Organism=Escherichia coli, GI87081923, Length=393, Percent_Identity=42.7480916030534, Blast_Score=358, Evalue=1e-100, Organism=Escherichia coli, GI48994973, Length=394, Percent_Identity=45.9390862944162, Blast_Score=357, Evalue=1e-100,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007197 [H]
Pfam domain/function: PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 45153; Mature: 45022
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIVFNTVAKPSGSLCNLSCKYCFYLDKPRGQRVMSDDVLETYIRRVIDDTPSSEVSFCW CCEEECCCCCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEE QGGEPTLCGLSFYQKVVRLQQRYANGKTIYNSLQTNGVLINEEWAAFFAQHQFLIGISID ECCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEECHHHHHHHHCCEEEEEEECC GPQVVHDNYRKTPSGRASFSRVVNAIRLLQANDVEFNTLTVVNDVSCRHGNAIYHFLTQE CCHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHH LESKHLQFIPIVEPLAQKTQRSLTLSDNEDSPSLMPFSVTPEGWGAFMCDVFDQWIRHDV HHHCCCEEEEHHHHHHHHHHCCEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH GRIFVQLFDNLLGVWMGEPATLCTMQSTCGQSLLVEQNGDVFSCDHFVFPAYKLGNLQQH HHHHHHHHHHHHHHHCCCCHHEEEEHHHCCCEEEEECCCCEEEECCEECCCHHCCCCHHH SLEEMAASSFQQQFGAAKANLSSRCQNCTWRFACHGGCPKHRICMDGGERQNYLCKGYLE HHHHHHHHHHHHHHCHHHHCHHHHHCCCEEEEEECCCCCCCCEECCCCCCCCHHHHHHHH FFQHVTPYMNVMRQLLLNQRPAAHITRIVDMIADDVRQ HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure SIVFNTVAKPSGSLCNLSCKYCFYLDKPRGQRVMSDDVLETYIRRVIDDTPSSEVSFCW CEEECCCCCCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEE QGGEPTLCGLSFYQKVVRLQQRYANGKTIYNSLQTNGVLINEEWAAFFAQHQFLIGISID ECCCCCEEHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEECHHHHHHHHCCEEEEEEECC GPQVVHDNYRKTPSGRASFSRVVNAIRLLQANDVEFNTLTVVNDVSCRHGNAIYHFLTQE CCHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHH LESKHLQFIPIVEPLAQKTQRSLTLSDNEDSPSLMPFSVTPEGWGAFMCDVFDQWIRHDV HHHCCCEEEEHHHHHHHHHHCCEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH GRIFVQLFDNLLGVWMGEPATLCTMQSTCGQSLLVEQNGDVFSCDHFVFPAYKLGNLQQH HHHHHHHHHHHHHHHCCCCHHEEEEHHHCCCEEEEECCCCEEEECCEECCCHHCCCCHHH SLEEMAASSFQQQFGAAKANLSSRCQNCTWRFACHGGCPKHRICMDGGERQNYLCKGYLE HHHHHHHHHHHHHHCHHHHCHHHHHCCCEEEEEECCCCCCCCEECCCCCCCCHHHHHHHH FFQHVTPYMNVMRQLLLNQRPAAHITRIVDMIADDVRQ HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1429442; 12663928 [H]