Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
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Accession | NC_011094 |
Length | 4,709,075 |
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The map label for this gene is otsB [H]
Identifier: 194736574
GI number: 194736574
Start: 2002583
End: 2003386
Strand: Reverse
Name: otsB [H]
Synonym: SeSA_A2084
Alternate gene names: 194736574
Gene position: 2003386-2002583 (Counterclockwise)
Preceding gene: 194737043
Following gene: 194736914
Centisome position: 42.54
GC content: 54.23
Gene sequence:
>804_bases GTGGCAGAACCGTTAACCGTATCCCCCGAACTCACTGCGAACTATGCGTATTTTTTTGACCTTGATGGCACATTGGCAGA GATAAAGCCTCATCCCGATCAGGTAGTGGTACCGCATAAAATCCTTCAGTTGTTAGACCGTCTCGCGGCGCACAACGCAG GGGCACTGGCATTGATTTCAGGGCGTTCAATGACTGAGCTGGATGCTTTGGCGAAGCCTTTTCGCTTTCCGCTCGCTGGC GTTCACGGTGCAGAGCGTCGTGACATCAATGGTAAAACCCATATCGTGCGCCTTCCTGAAGCGGTAGTCCGTGAGGTGGA GGCGTTATTACGTTCGACGCTTGTAGCGCTGCCCGGAACGGAGCTGGAGACGAAGGGGATGGCGTTTGCGCTGCACTACC GTCAGGCTCCGGAACATGAAGCGGCGCTATTGGCGCTTGCGCAACACGTTACGCAGCACTGGCCGCAACTGGCGTTGCAG CCTGGTAAATGTGTTGTGGAAATCAAACCTAAGGGAACCAATAAAGGCGAAGCGATTGCCGCCTTTATGCAGGAGGCGCC CTTTGCGGGACGGATTCCCGTTTTTGTGGGCGACGATTTGACCGATGAGACTGGCTTTGGCGTGGTGAATCACGCTGGCG GAATTTCCGTAAAAGTGGGCGTCGGGGCAACCCAGGCGGCATGGCGGCTGGAAAGCGTACCCGATGTCTGGCGCTGGCTG GAGCAAATCAATTATCCACAACAAGAACAACAAGTAATGAATAACAGGAGAGATGGCTATGAGTCGTTTAGTCGTAGTAT CTAA
Upstream 100 bases:
>100_bases GATGGTCTTTCTAAATGGCGAGCAGCGTCACACTGTCTATACTTACATGACTAATGAGACCGTTTGTGAGTCTCAATATG ATGATAAGGAGGAGACAAGG
Downstream 100 bases:
>100_bases TCGAATTGCCCCCCCGGATAATAAAGGCGGCGCCGGCGGCCTCGCCGTTGGCGTGCTTGGCGCGCTAAAAGCGGCTGGCG GGTTGTGGTTCGGCTGGAGT
Product: trehalose-6-phosphate phosphatase
Products: NA
Alternate protein names: TPP; Trehalose 6-phosphate phosphatase; Trehalose-phosphatase [H]
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MAEPLTVSPELTANYAYFFDLDGTLAEIKPHPDQVVVPHKILQLLDRLAAHNAGALALISGRSMTELDALAKPFRFPLAG VHGAERRDINGKTHIVRLPEAVVREVEALLRSTLVALPGTELETKGMAFALHYRQAPEHEAALLALAQHVTQHWPQLALQ PGKCVVEIKPKGTNKGEAIAAFMQEAPFAGRIPVFVGDDLTDETGFGVVNHAGGISVKVGVGATQAAWRLESVPDVWRWL EQINYPQQEQQVMNNRRDGYESFSRSI
Sequences:
>Translated_267_residues MAEPLTVSPELTANYAYFFDLDGTLAEIKPHPDQVVVPHKILQLLDRLAAHNAGALALISGRSMTELDALAKPFRFPLAG VHGAERRDINGKTHIVRLPEAVVREVEALLRSTLVALPGTELETKGMAFALHYRQAPEHEAALLALAQHVTQHWPQLALQ PGKCVVEIKPKGTNKGEAIAAFMQEAPFAGRIPVFVGDDLTDETGFGVVNHAGGISVKVGVGATQAAWRLESVPDVWRWL EQINYPQQEQQVMNNRRDGYESFSRSI >Mature_266_residues AEPLTVSPELTANYAYFFDLDGTLAEIKPHPDQVVVPHKILQLLDRLAAHNAGALALISGRSMTELDALAKPFRFPLAGV HGAERRDINGKTHIVRLPEAVVREVEALLRSTLVALPGTELETKGMAFALHYRQAPEHEAALLALAQHVTQHWPQLALQP GKCVVEIKPKGTNKGEAIAAFMQEAPFAGRIPVFVGDDLTDETGFGVVNHAGGISVKVGVGATQAAWRLESVPDVWRWLE QINYPQQEQQVMNNRRDGYESFSRSI
Specific function: Removes the phosphate from trehalose 6-phosphate to produce free trehalose [H]
COG id: COG1877
COG function: function code G; Trehalose-6-phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trehalose phosphatase family [H]
Homologues:
Organism=Escherichia coli, GI1788207, Length=267, Percent_Identity=73.4082397003745, Blast_Score=406, Evalue=1e-115, Organism=Drosophila melanogaster, GI19920676, Length=196, Percent_Identity=31.1224489795918, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI221473368, Length=245, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI20129307, Length=245, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI24582490, Length=245, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006379 - InterPro: IPR003337 [H]
Pfam domain/function: PF02358 Trehalose_PPase [H]
EC number: =3.1.3.12 [H]
Molecular weight: Translated: 29290; Mature: 29159
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPLTVSPELTANYAYFFDLDGTLAEIKPHPDQVVVPHKILQLLDRLAAHNAGALALIS CCCCCCCCCCCCCCEEEEEECCCCCEECCCCCCCEECHHHHHHHHHHHHHCCCCEEEEEC GRSMTELDALAKPFRFPLAGVHGAERRDINGKTHIVRLPEAVVREVEALLRSTLVALPGT CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCC ELETKGMAFALHYRQAPEHEAALLALAQHVTQHWPQLALQPGKCVVEIKPKGTNKGEAIA CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHH AFMQEAPFAGRIPVFVGDDLTDETGFGVVNHAGGISVKVGVGATQAAWRLESVPDVWRWL HHHHHCCCCCCCCEEECCCCCCCCCCCEEECCCCEEEEECCCCCHHHHHHHCCHHHHHHH EQINYPQQEQQVMNNRRDGYESFSRSI HHCCCCHHHHHHHHCCCCHHHHHHCCC >Mature Secondary Structure AEPLTVSPELTANYAYFFDLDGTLAEIKPHPDQVVVPHKILQLLDRLAAHNAGALALIS CCCCCCCCCCCCCEEEEEECCCCCEECCCCCCCEECHHHHHHHHHHHHHCCCCEEEEEC GRSMTELDALAKPFRFPLAGVHGAERRDINGKTHIVRLPEAVVREVEALLRSTLVALPGT CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCC ELETKGMAFALHYRQAPEHEAALLALAQHVTQHWPQLALQPGKCVVEIKPKGTNKGEAIA CCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHH AFMQEAPFAGRIPVFVGDDLTDETGFGVVNHAGGISVKVGVGATQAAWRLESVPDVWRWL HHHHHCCCCCCCCEEECCCCCCCCCCCEEECCCCEEEEECCCCCHHHHHHHCCHHHHHHH EQINYPQQEQQVMNNRRDGYESFSRSI HHCCCCHHHHHHHHCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609 [H]