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The map label for this gene is ygbN [C]

Identifier: 194736195

GI number: 194736195

Start: 2960886

End: 2962382

Strand: Reverse

Name: ygbN [C]

Synonym: SeSA_A3063

Alternate gene names: 194736195

Gene position: 2962382-2960886 (Counterclockwise)

Preceding gene: 194738064

Following gene: 194735247

Centisome position: 62.91

GC content: 58.85

Gene sequence:

>1497_bases
ATGACAAGTTTACCGACCCCAATTATCGGCCTGATCGTTGCCGTTTTCGTTCTGGTATGGCTGGTGTTACGCACCCGTGT
TCATGCGCTGATCGCGATGCTGGCGGCGGCCTGTATCGCCGGTCTGTTGGGGGGAATGGGCATTGATAAAACGCTCTCTG
TCATCACCAGCGGATTCGGTACGACGCTGGGCAGCATTGGCCTGGTGATTGGTCTCGGCGTAATGATGGGGCGCTTGCTG
GAGGTTTCCGGCGCGGCGGAGCGTATCGCCTGGAGCTTTATCAAATGGCTGGGGAAACGCCGTGAAGAGTGGGCGCTGGC
GATCACGGGTTATATTGTCAGCATTCCCATTTTCGTCGATTCCGCTTTTGTCATTCTTTATCCGGTGGCGAAAGCGCTGG
CGAAAAGCGGTAAACGTTCGCTACTGACGCTGGGCGTCGCGCTGGCGGGCGGGCTGGTGGTCACTCACCATACGGTACCT
CCGACGCCAGGCCCGCTGGGGGTAGCCGGGATTTTTAACGTCGACATCGGCGCAATGTTATTGACCGGGATGGCGCTGGC
GGTGCCCTGTGTGATCGGCATTGTGTTCTATGCGCAGTGGCTGGATAAACGCTACCCTGATTTCGTGCCGCGCACGCTGA
ACGCCGATGAAGTCAATGCCGCGCTGGAGCAGTACAATAAAGAGAAAGAGCAAAAGGATCTGCCGAGCCTGACGCTCTCT
CTGCTGCCTATTGTGGTGCCGATCGTGCTGATCTTCCTGAAGGCTATCTGTTCCACCCTCGCCACTGTAGAAGGATGGTC
CGGCCTGGCGACGCATCCGGTGGTACAGGCAATCAACTTTGTGGGAAGTCCAGTGATCGCGTTGGCCATCAGCGTTCTGC
TGGCGGTGTATACGCTGGTGCCGCGCATGGATAAACATACCACCGCAGAGCGTCTGGAAGAGGGCTTGCAAAGCGCCGGG
ATTATCTTACTGGTCACGGGCGCTGGCGGCGCGTTGGGCGCGATCCTGCGCGACAGCGGCGCGGGGCAACAGCTGGCGGA
GCAGGTTGCCAACCTGCCGATCTCGCCGATCCTGATCCCGTTTATCGTGGCGACGCTGGTACGCCTGATTCAGGGATCGG
GGACGGTGGCGATGATCACTGCCGCCTCGATTTCCGCGCCGATCCTGGCGCAGATCCCCGGCATCAATATGTTGCTTGCC
GCTCAGGCCGCAACGATGGGGTCGCTGTTCTTCGGCTACTTCAACGATAGCCTGTTCTGGGTGGTTAACCGCATGATGGG
CGTCTCTGATGTCAAACAGCAGATGGTGGTTTGGTCTGTACCGACGACCATTGCCTGGGCGATTGGCGGCACCGGCGTGG
CGCTGATTAACCTGCTGTTCGGTTCCGGCGGCAGTTGGCTCGATCCGTTACTGCCGATTGTCGTTCTGGCGGCAATTATG
CTGTGGGTGCGTTGGCAGGCGCAGGGGATCAAAGACAAGCTGGTAGTTAAGGATTAA

Upstream 100 bases:

>100_bases
GTATCGATAACCAGCGGGCGCTGGCGTTAGGTTTTGTCGCCGATAAACGCTTCGATGACATTATCGAACGCTTTCGACAA
GATGATATGGAGGGGAGGTC

Downstream 100 bases:

>100_bases
GACGGTATTATCCGTCCGGGAGCGCAATGCTCCCGGGCTGGCTACAATGATGGGGCGTGCTCCCCGCAATCCCATTGCGA
ACGTAAAAAATCAATAAATG

Product: GntP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 498; Mature: 497

Protein sequence:

>498_residues
MTSLPTPIIGLIVAVFVLVWLVLRTRVHALIAMLAAACIAGLLGGMGIDKTLSVITSGFGTTLGSIGLVIGLGVMMGRLL
EVSGAAERIAWSFIKWLGKRREEWALAITGYIVSIPIFVDSAFVILYPVAKALAKSGKRSLLTLGVALAGGLVVTHHTVP
PTPGPLGVAGIFNVDIGAMLLTGMALAVPCVIGIVFYAQWLDKRYPDFVPRTLNADEVNAALEQYNKEKEQKDLPSLTLS
LLPIVVPIVLIFLKAICSTLATVEGWSGLATHPVVQAINFVGSPVIALAISVLLAVYTLVPRMDKHTTAERLEEGLQSAG
IILLVTGAGGALGAILRDSGAGQQLAEQVANLPISPILIPFIVATLVRLIQGSGTVAMITAASISAPILAQIPGINMLLA
AQAATMGSLFFGYFNDSLFWVVNRMMGVSDVKQQMVVWSVPTTIAWAIGGTGVALINLLFGSGGSWLDPLLPIVVLAAIM
LWVRWQAQGIKDKLVVKD

Sequences:

>Translated_498_residues
MTSLPTPIIGLIVAVFVLVWLVLRTRVHALIAMLAAACIAGLLGGMGIDKTLSVITSGFGTTLGSIGLVIGLGVMMGRLL
EVSGAAERIAWSFIKWLGKRREEWALAITGYIVSIPIFVDSAFVILYPVAKALAKSGKRSLLTLGVALAGGLVVTHHTVP
PTPGPLGVAGIFNVDIGAMLLTGMALAVPCVIGIVFYAQWLDKRYPDFVPRTLNADEVNAALEQYNKEKEQKDLPSLTLS
LLPIVVPIVLIFLKAICSTLATVEGWSGLATHPVVQAINFVGSPVIALAISVLLAVYTLVPRMDKHTTAERLEEGLQSAG
IILLVTGAGGALGAILRDSGAGQQLAEQVANLPISPILIPFIVATLVRLIQGSGTVAMITAASISAPILAQIPGINMLLA
AQAATMGSLFFGYFNDSLFWVVNRMMGVSDVKQQMVVWSVPTTIAWAIGGTGVALINLLFGSGGSWLDPLLPIVVLAAIM
LWVRWQAQGIKDKLVVKD
>Mature_497_residues
TSLPTPIIGLIVAVFVLVWLVLRTRVHALIAMLAAACIAGLLGGMGIDKTLSVITSGFGTTLGSIGLVIGLGVMMGRLLE
VSGAAERIAWSFIKWLGKRREEWALAITGYIVSIPIFVDSAFVILYPVAKALAKSGKRSLLTLGVALAGGLVVTHHTVPP
TPGPLGVAGIFNVDIGAMLLTGMALAVPCVIGIVFYAQWLDKRYPDFVPRTLNADEVNAALEQYNKEKEQKDLPSLTLSL
LPIVVPIVLIFLKAICSTLATVEGWSGLATHPVVQAINFVGSPVIALAISVLLAVYTLVPRMDKHTTAERLEEGLQSAGI
ILLVTGAGGALGAILRDSGAGQQLAEQVANLPISPILIPFIVATLVRLIQGSGTVAMITAASISAPILAQIPGINMLLAA
QAATMGSLFFGYFNDSLFWVVNRMMGVSDVKQQMVVWSVPTTIAWAIGGTGVALINLLFGSGGSWLDPLLPIVVLAAIML
WVRWQAQGIKDKLVVKD

Specific function: Unknown

COG id: COG2610

COG function: function code GE; H+/gluconate symporter and related permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gntP permease family [H]

Homologues:

Organism=Escherichia coli, GI48994935, Length=459, Percent_Identity=33.7690631808279, Blast_Score=215, Evalue=5e-57,
Organism=Escherichia coli, GI1789097, Length=436, Percent_Identity=33.4862385321101, Blast_Score=214, Evalue=1e-56,
Organism=Escherichia coli, GI1788707, Length=454, Percent_Identity=33.0396475770925, Blast_Score=202, Evalue=5e-53,
Organism=Escherichia coli, GI1790716, Length=458, Percent_Identity=31.4410480349345, Blast_Score=202, Evalue=6e-53,
Organism=Escherichia coli, GI2367370, Length=404, Percent_Identity=31.1881188118812, Blast_Score=188, Evalue=7e-49,
Organism=Escherichia coli, GI48994939, Length=454, Percent_Identity=30.3964757709251, Blast_Score=182, Evalue=4e-47,
Organism=Escherichia coli, GI1790776, Length=429, Percent_Identity=28.6713286713287, Blast_Score=168, Evalue=7e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003474 [H]

Pfam domain/function: PF02447 GntP_permease [H]

EC number: NA

Molecular weight: Translated: 52471; Mature: 52340

Theoretical pI: Translated: 9.07; Mature: 9.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TSLPTPIIGLIVAVFVLVWLVLRTRVHALIAMLAAACIAGLLGGMGIDKTLSVITSGFG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
TTLGSIGLVIGLGVMMGRLLEVSGAAERIAWSFIKWLGKRREEWALAITGYIVSIPIFVD
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHEEEHHHHHHHHHHC
SAFVILYPVAKALAKSGKRSLLTLGVALAGGLVVTHHTVPPTPGPLGVAGIFNVDIGAML
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHH
LTGMALAVPCVIGIVFYAQWLDKRYPDFVPRTLNADEVNAALEQYNKEKEQKDLPSLTLS
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHH
LLPIVVPIVLIFLKAICSTLATVEGWSGLATHPVVQAINFVGSPVIALAISVLLAVYTLV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
PRMDKHTTAERLEEGLQSAGIILLVTGAGGALGAILRDSGAGQQLAEQVANLPISPILIP
CCCCCCHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHH
FIVATLVRLIQGSGTVAMITAASISAPILAQIPGINMLLAAQAATMGSLFFGYFNDSLFW
HHHHHHHHHHCCCCCEEEEEEHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHH
VVNRMMGVSDVKQQMVVWSVPTTIAWAIGGTGVALINLLFGSGGSWLDPLLPIVVLAAIM
HHHHHHCHHHHHHHHEEEECCHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LWVRWQAQGIKDKLVVKD
HHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]