Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
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Accession | NC_011094 |
Length | 4,709,075 |
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The map label for this gene is hypC [H]
Identifier: 194736087
GI number: 194736087
Start: 3212644
End: 3212892
Strand: Reverse
Name: hypC [H]
Synonym: SeSA_A3325
Alternate gene names: 194736087
Gene position: 3212892-3212644 (Counterclockwise)
Preceding gene: 194736360
Following gene: 194735058
Centisome position: 68.23
GC content: 53.41
Gene sequence:
>249_bases ATGTGTATTGGCGTCCCCGGTCAGGTGCTGGCCGTCGGAGATGATATTCACCAGCTTGCGCAGGTGGAAGTGTGTGGCAT CAAACGTGATGTCAATATTGCTCTGATTTGTGAAGGTAAGCCAGCCGAGCTGATAGGGCAATGGGTATTGGTACACGTTG GTTTTGCGATGAGCATCATTGACGAAGACGAGGCGAAAGCCACGTTAGATGCGCTGCGCCGCATGGAGTACGACATCACC AGCGCGTGA
Upstream 100 bases:
>100_bases GCATTGTCATGGCGATCGCCTGCGGGTGGATACCGGCGATTCGTTGAAAGTAAAAAGTATTGAGGTCGAATAACCCGCAT TTTATTCCAGGTGGTTAATT
Downstream 100 bases:
>100_bases TCCCTTAATCACCTCTATTATATCGCTCTATAATCGTTGTATAATTATTTATATATCGATTGTGGGGCGAAACCTATGAA TAAATTTTTGCGCCAGCTCT
Product: hydrogenase 2 accessory protein HypG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MCIGVPGQVLAVGDDIHQLAQVEVCGIKRDVNIALICEGKPAELIGQWVLVHVGFAMSIIDEDEAKATLDALRRMEYDIT SA
Sequences:
>Translated_82_residues MCIGVPGQVLAVGDDIHQLAQVEVCGIKRDVNIALICEGKPAELIGQWVLVHVGFAMSIIDEDEAKATLDALRRMEYDIT SA >Mature_82_residues MCIGVPGQVLAVGDDIHQLAQVEVCGIKRDVNIALICEGKPAELIGQWVLVHVGFAMSIIDEDEAKATLDALRRMEYDIT SA
Specific function: May have a specific role in the maturation of the large subunits of HYD1 and HYD2 [H]
COG id: COG0298
COG function: function code O; Hydrogenase maturation factor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hupF/hypC family [H]
Homologues:
Organism=Escherichia coli, GI1789364, Length=82, Percent_Identity=92.6829268292683, Blast_Score=157, Evalue=1e-40, Organism=Escherichia coli, GI1789083, Length=81, Percent_Identity=55.5555555555556, Blast_Score=84, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019812 - InterPro: IPR001109 [H]
Pfam domain/function: PF01455 HupF_HypC [H]
EC number: NA
Molecular weight: Translated: 8864; Mature: 8864
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: PS01097 HUPF_HYPC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCIGVPGQVLAVGDDIHQLAQVEVCGIKRDVNIALICEGKPAELIGQWVLVHVGFAMSII CEECCCCCEEEECHHHHHHHHHHEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHEEE DEDEAKATLDALRRMEYDITSA CCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MCIGVPGQVLAVGDDIHQLAQVEVCGIKRDVNIALICEGKPAELIGQWVLVHVGFAMSII CEECCCCCEEEECHHHHHHHHHHEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHEEE DEDEAKATLDALRRMEYDITSA CCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]