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The map label for this gene is 194735058

Identifier: 194735058

GI number: 194735058

Start: 3211516

End: 3212568

Strand: Reverse

Name: 194735058

Synonym: SeSA_A3324

Alternate gene names: NA

Gene position: 3212568-3211516 (Counterclockwise)

Preceding gene: 194736087

Following gene: 194734831

Centisome position: 68.22

GC content: 53.85

Gene sequence:

>1053_bases
ATGAATAAATTTTTGCGCCAGCTCTCTCTGCTGGCGTTGCTTTTTTGCTGGCCGTTAATGTCACAGGCGGCGCGTACTTT
TACCGATCAACTTGGCCGCCAGGTCACTGTTCCCGACACCGTCGACAGAGTGGTGGTGCTCCAGCATCAAACGCTCAATC
TCCTTGTACAGATGAATGCCACTGACAAAATCGTTGGGGTCATGGCGAACTGGAAACAGCAATTAGGCGACGGCTATGCG
CGTCTGGCGCCGGAACTGGCGCAAAAAGCCTCGCTGGGCGATCTAACGCACGTTGATCCTGAAAAACTGGTGGCGCTGCA
CCCGCAGGTGGTGTTTGTCACGAATTACGCTCCGCAGGAGATGATCGACAAGATCAGCCGTCTTGGCATTCCGGTGGTGG
CGATTTCGCTGCGCCATGATGTTGTTGGCGAGCAGGCTAAAATGAACCCGACCCTGGCCGATGAAGAGCAGGCTTACAAC
CGCGGGCTGCGTGAAGGAATAACGCTGATTGGCGATATCGTCAATAAACCGCAGGAGGCGAAAGCGCTGATTGAGGCGAT
GGATAAAGGTCGCAAAATGGTCAGCGACCGTTTGCAGTCGGTTCCTGAAAATGAGCGGGTTCGCGCCTATATGGCGAATC
CGGAGCTGACCACCTACGGTTCCGGTAAATATACCGGTCTGATGATGGCCCATGCGGGGGCGCTGAATGTAGCGGCATCC
TCGGTGAAAGGCTTTAAGCAGGTGACAATGGAGCAGGTGATCGCCTGGGATCCACAGGTGATCTTTGTCCAGAATCGCTA
TCCAAAGGTCGTCAATGAGATCCTGCACAATCCCCAGTGGCAGGTCATTGACGCGGTGAAGCATCATCGGGTTTACCTGA
TGCCGGATTATGCCAAAGCCTGGGGATATCCGATGCCGGAGGCGGTGGGAATCGGCGAACTGTGGATGGCGAAAAAACTC
TATCCGGAAAAATTCCACGATATTGACATGCAAAAGGCCGCTAACGACTGGTATCAACGTTTTTACCGTACTGACTATCA
GGGCGTACAGTGA

Upstream 100 bases:

>100_bases
GGAGTACGACATCACCAGCGCGTGATCCCTTAATCACCTCTATTATATCGCTCTATAATCGTTGTATAATTATTTATATA
TCGATTGTGGGGCGAAACCT

Downstream 100 bases:

>100_bases
TGCGAATACTGGCTGCGGGGAGCTTGCGTGTCGTCTGGCCGCAGCTAATGGCGGCGTTTCAGGCGGATGCGGTATGTGAT
TTCGGTCCGGCGGGGTTGTT

Product: periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MNKFLRQLSLLALLFCWPLMSQAARTFTDQLGRQVTVPDTVDRVVVLQHQTLNLLVQMNATDKIVGVMANWKQQLGDGYA
RLAPELAQKASLGDLTHVDPEKLVALHPQVVFVTNYAPQEMIDKISRLGIPVVAISLRHDVVGEQAKMNPTLADEEQAYN
RGLREGITLIGDIVNKPQEAKALIEAMDKGRKMVSDRLQSVPENERVRAYMANPELTTYGSGKYTGLMMAHAGALNVAAS
SVKGFKQVTMEQVIAWDPQVIFVQNRYPKVVNEILHNPQWQVIDAVKHHRVYLMPDYAKAWGYPMPEAVGIGELWMAKKL
YPEKFHDIDMQKAANDWYQRFYRTDYQGVQ

Sequences:

>Translated_350_residues
MNKFLRQLSLLALLFCWPLMSQAARTFTDQLGRQVTVPDTVDRVVVLQHQTLNLLVQMNATDKIVGVMANWKQQLGDGYA
RLAPELAQKASLGDLTHVDPEKLVALHPQVVFVTNYAPQEMIDKISRLGIPVVAISLRHDVVGEQAKMNPTLADEEQAYN
RGLREGITLIGDIVNKPQEAKALIEAMDKGRKMVSDRLQSVPENERVRAYMANPELTTYGSGKYTGLMMAHAGALNVAAS
SVKGFKQVTMEQVIAWDPQVIFVQNRYPKVVNEILHNPQWQVIDAVKHHRVYLMPDYAKAWGYPMPEAVGIGELWMAKKL
YPEKFHDIDMQKAANDWYQRFYRTDYQGVQ
>Mature_350_residues
MNKFLRQLSLLALLFCWPLMSQAARTFTDQLGRQVTVPDTVDRVVVLQHQTLNLLVQMNATDKIVGVMANWKQQLGDGYA
RLAPELAQKASLGDLTHVDPEKLVALHPQVVFVTNYAPQEMIDKISRLGIPVVAISLRHDVVGEQAKMNPTLADEEQAYN
RGLREGITLIGDIVNKPQEAKALIEAMDKGRKMVSDRLQSVPENERVRAYMANPELTTYGSGKYTGLMMAHAGALNVAAS
SVKGFKQVTMEQVIAWDPQVIFVQNRYPKVVNEILHNPQWQVIDAVKHHRVYLMPDYAKAWGYPMPEAVGIGELWMAKKL
YPEKFHDIDMQKAANDWYQRFYRTDYQGVQ

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 39630; Mature: 39630

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKFLRQLSLLALLFCWPLMSQAARTFTDQLGRQVTVPDTVDRVVVLQHQTLNLLVQMNA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHCCEEEEEECEEEEEEEECC
TDKIVGVMANWKQQLGDGYARLAPELAQKASLGDLTHVDPEKLVALHPQVVFVTNYAPQE
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHEECCEEEEEECCCHHH
MIDKISRLGIPVVAISLRHDVVGEQAKMNPTLADEEQAYNRGLREGITLIGDIVNKPQEA
HHHHHHHCCCCEEEEEHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
KALIEAMDKGRKMVSDRLQSVPENERVRAYMANPELTTYGSGKYTGLMMAHAGALNVAAS
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEECCCCCEEEEHHHHCCHHHHHHH
SVKGFKQVTMEQVIAWDPQVIFVQNRYPKVVNEILHNPQWQVIDAVKHHRVYLMPDYAKA
HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHCEEEEEECHHHH
WGYPMPEAVGIGELWMAKKLYPEKFHDIDMQKAANDWYQRFYRTDYQGVQ
CCCCCCCCCCCHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNKFLRQLSLLALLFCWPLMSQAARTFTDQLGRQVTVPDTVDRVVVLQHQTLNLLVQMNA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHCCEEEEEECEEEEEEEECC
TDKIVGVMANWKQQLGDGYARLAPELAQKASLGDLTHVDPEKLVALHPQVVFVTNYAPQE
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHEECCEEEEEECCCHHH
MIDKISRLGIPVVAISLRHDVVGEQAKMNPTLADEEQAYNRGLREGITLIGDIVNKPQEA
HHHHHHHCCCCEEEEEHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
KALIEAMDKGRKMVSDRLQSVPENERVRAYMANPELTTYGSGKYTGLMMAHAGALNVAAS
HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEECCCCCEEEEHHHHCCHHHHHHH
SVKGFKQVTMEQVIAWDPQVIFVQNRYPKVVNEILHNPQWQVIDAVKHHRVYLMPDYAKA
HHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHHCEEEEEECHHHH
WGYPMPEAVGIGELWMAKKLYPEKFHDIDMQKAANDWYQRFYRTDYQGVQ
CCCCCCCCCCCHHHHHHHHHCHHHHHCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]