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The map label for this gene is kdgT2 [H]

Identifier: 194735971

GI number: 194735971

Start: 786837

End: 787790

Strand: Direct

Name: kdgT2 [H]

Synonym: SeSA_A0811

Alternate gene names: 194735971

Gene position: 786837-787790 (Clockwise)

Preceding gene: 194735589

Following gene: 194736230

Centisome position: 16.71

GC content: 52.2

Gene sequence:

>954_bases
ATGAAAATTAAAAAAACACTGGAACGTTTTCCTGGTGGTATGATGGTTGTACCGCTAATCATCGGCGCATTGTTTAAAAC
TTTTGCGCCGGAGGCGCTGGAAATAGGCGGTTTTGTCACCTCTATTTCGCATGGCGCAATGGCGATTTTAGGCATGTTTT
TAGTCTGTATGGGCGCGGATATCCAGTTTAAAGCCGCGCCGAAAGCGCTGAAAAAAGGCGCTGCGATCACCTTTGCGAAA
TTTGCCAGCGGCGTGATTATTGGCATTCTGGTCGGAAAATTTTGCGGCCCGGATGGGTTATTAGGTCTGTCGGCTTTAGC
GATTATTTCGGCGATGACCAACTCGAACAGTGGGTTATATGCCGCGTTGGTGGGGGAGTACGGCGATGAAACCGACGGCG
GCGCGATTGCGGTAATATCGTTGAACGATGGTCCCTTTTTCACCATGCTGGCGTTAGGGTCGGCAGGCATGGTGTCGATA
CCCTTTATGAATCTGGTGGCGGTTATTATTCCCATTATCATTGGCATGATTTTGGGTAATCTGGATGAGGACATGCGCAA
GTTTCTTAAACAGGGCAGCGTGGTAACGATTCCCTTTTTTGCCTTTGGGTTAGGATACGGTATTGATTTCGCAAGACTTA
TCACGGCAGGTTCTTCAGGCATTTTACTGGGACTCATGACGGTGGCGATTGGCGGATTTTTTAATATTTTCGCCGATCGT
CTGACGGGAGGCAGCGGCGTGGCAGGTGCGGCGGTATCCACTACCTCTGGCAACGCCGTCGCGACGCCAGCGGCAATCGC
GCTGCTCGATCCGCATTTTACCGACCTGGCGTCGACGGCGGCGGCGCAGGTGGCGGCCTCGACGATTATTACCGCTCTGT
GCGCCCCCTTCCTGACCGTATGGATAAAAAAACGCTACGATCGTAAACTGAACCCAGCCGCCGCAGGCGGTTAG

Upstream 100 bases:

>100_bases
GATTTAGGTCATAACGAATTCTCTATTTATAAGATCGCGCCGACGTTCTGATACCAAATCGGGCAGCACCAGCTGTCCGG
TTATCTCCTGGGAATAAGCT

Downstream 100 bases:

>100_bases
CGTTTCGGCGGAAAATAAATCACGACGGGCGGTCTCGCCCGTTCATAAACCAACAGGATGGTGAGTGATGAATAAGACGA
AAGATATAGCCGCATCTCCT

Product: 2-keto-3-deoxygluconate permease

Products: Proton [Cytoplasm]; 2-dehydro-3-deoxy-D-gluconate [Cytoplasm] [C]

Alternate protein names: KDG permease 2 [H]

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MKIKKTLERFPGGMMVVPLIIGALFKTFAPEALEIGGFVTSISHGAMAILGMFLVCMGADIQFKAAPKALKKGAAITFAK
FASGVIIGILVGKFCGPDGLLGLSALAIISAMTNSNSGLYAALVGEYGDETDGGAIAVISLNDGPFFTMLALGSAGMVSI
PFMNLVAVIIPIIIGMILGNLDEDMRKFLKQGSVVTIPFFAFGLGYGIDFARLITAGSSGILLGLMTVAIGGFFNIFADR
LTGGSGVAGAAVSTTSGNAVATPAAIALLDPHFTDLASTAAAQVAASTIITALCAPFLTVWIKKRYDRKLNPAAAGG

Sequences:

>Translated_317_residues
MKIKKTLERFPGGMMVVPLIIGALFKTFAPEALEIGGFVTSISHGAMAILGMFLVCMGADIQFKAAPKALKKGAAITFAK
FASGVIIGILVGKFCGPDGLLGLSALAIISAMTNSNSGLYAALVGEYGDETDGGAIAVISLNDGPFFTMLALGSAGMVSI
PFMNLVAVIIPIIIGMILGNLDEDMRKFLKQGSVVTIPFFAFGLGYGIDFARLITAGSSGILLGLMTVAIGGFFNIFADR
LTGGSGVAGAAVSTTSGNAVATPAAIALLDPHFTDLASTAAAQVAASTIITALCAPFLTVWIKKRYDRKLNPAAAGG
>Mature_317_residues
MKIKKTLERFPGGMMVVPLIIGALFKTFAPEALEIGGFVTSISHGAMAILGMFLVCMGADIQFKAAPKALKKGAAITFAK
FASGVIIGILVGKFCGPDGLLGLSALAIISAMTNSNSGLYAALVGEYGDETDGGAIAVISLNDGPFFTMLALGSAGMVSI
PFMNLVAVIIPIIIGMILGNLDEDMRKFLKQGSVVTIPFFAFGLGYGIDFARLITAGSSGILLGLMTVAIGGFFNIFADR
LTGGSGVAGAAVSTTSGNAVATPAAIALLDPHFTDLASTAAAQVAASTIITALCAPFLTVWIKKRYDRKLNPAAAGG

Specific function: The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kdgT transporter family [H]

Homologues:

Organism=Escherichia coli, GI87082349, Length=316, Percent_Identity=38.6075949367089, Blast_Score=189, Evalue=2e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004684
- ProDom:   PD024513 [H]

Pfam domain/function: PF03812 KdgT [H]

EC number: NA

Molecular weight: Translated: 32367; Mature: 32367

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKKTLERFPGGMMVVPLIIGALFKTFAPEALEIGGFVTSISHGAMAILGMFLVCMGAD
CCCHHHHHHCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IQFKAAPKALKKGAAITFAKFASGVIIGILVGKFCGPDGLLGLSALAIISAMTNSNSGLY
CEECCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEE
AALVGEYGDETDGGAIAVISLNDGPFFTMLALGSAGMVSIPFMNLVAVIIPIIIGMILGN
EEEECCCCCCCCCCEEEEEEECCCCEEHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHCC
LDEDMRKFLKQGSVVTIPFFAFGLGYGIDFARLITAGSSGILLGLMTVAIGGFFNIFADR
CCHHHHHHHHCCCEEEEHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LTGGSGVAGAAVSTTSGNAVATPAAIALLDPHFTDLASTAAAQVAASTIITALCAPFLTV
HCCCCCCCCCEEECCCCCCEECCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WIKKRYDRKLNPAAAGG
HHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKIKKTLERFPGGMMVVPLIIGALFKTFAPEALEIGGFVTSISHGAMAILGMFLVCMGAD
CCCHHHHHHCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
IQFKAAPKALKKGAAITFAKFASGVIIGILVGKFCGPDGLLGLSALAIISAMTNSNSGLY
CEECCCHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEE
AALVGEYGDETDGGAIAVISLNDGPFFTMLALGSAGMVSIPFMNLVAVIIPIIIGMILGN
EEEECCCCCCCCCCEEEEEEECCCCEEHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHCC
LDEDMRKFLKQGSVVTIPFFAFGLGYGIDFARLITAGSSGILLGLMTVAIGGFFNIFADR
CCHHHHHHHHCCCEEEEHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LTGGSGVAGAAVSTTSGNAVATPAAIALLDPHFTDLASTAAAQVAASTIITALCAPFLTV
HCCCCCCCCCEEECCCCCCEECCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WIKKRYDRKLNPAAAGG
HHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; 2-dehydro-3-deoxy-D-gluconate [Periplasm] [C]

Specific reaction: Proton [Periplasm] + 2-dehydro-3-deoxy-D-gluconate [Periplasm] = Proton [Cytoplasm] + 2-dehydro-3-deoxy-D-gluconate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]