Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
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Accession | NC_011094 |
Length | 4,709,075 |
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The map label for this gene is yebN [C]
Identifier: 194735188
GI number: 194735188
Start: 1910157
End: 1910723
Strand: Direct
Name: yebN [C]
Synonym: SeSA_A1978
Alternate gene names: 194735188
Gene position: 1910157-1910723 (Clockwise)
Preceding gene: 194734017
Following gene: 194736958
Centisome position: 40.56
GC content: 53.44
Gene sequence:
>567_bases ATGCACTTTACTGCTACTGTTCTTCTCGCTTTCGGCATGTCGATGGATGCTTTCGCGGCATCAATTGGCAAAGGCGCCAC CCTACATAAACCCAAATTCTCAGAAGCGTTGCGTACCGGCCTTATCTTTGGCGCGGTTGAAACGCTGACCCCGTTAATCG GCTGGGGGCTGGGGATATTGGCGAGTAAATTCGTTCTGGAGTGGAACCACTGGATAGCCTTTGTTCTGCTGATCTTTCTG GGCGGACGCATGATCATCGAAGGTATCCGCGGCGGTAGTGATGAAGACGAAACACCGTTACGCCGCCACAGCTTTTGGCT ATTAGTCACGACGGCTATCGCGACCAGCCTCGATGCGATGGCGGTTGGCGTCGGTCTGGCGTTTTTGCAGGTAAACATCA TCGCTACCGCATTAGCTATCGGTTGCGCCACGCTTATCATGTCCACCCTCGGAATGATGATCGGTCGCTTTATCGGCCCA ATGCTGGGTAAGCGTGCTGAAATTCTCGGCGGGGTCGTACTGATAGGAATTGGCGTCCAGATCCTCTGGACGCATTTTCA CGGTTAA
Upstream 100 bases:
>100_bases TAGGCGCATCAACTGCTGTGTATTTCGTCACAGAATGGCGACATGCATGTTTGCTGGGGGCAGTGATGTGTTTAATGGAT ACCCCGGTCAGGACGTTGTC
Downstream 100 bases:
>100_bases CGGTTACGCTGCCAGAGATGAAGGTTGAAATCCGTCTGGCAGCTAAGTCCGGTGCTGGCGGCCAGTTGTTCCCACACTTC TGGCCTGGCGCGCCAGGCAA
Product: membrane protein YebN
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MHFTATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFGAVETLTPLIGWGLGILASKFVLEWNHWIAFVLLIFL GGRMIIEGIRGGSDEDETPLRRHSFWLLVTTAIATSLDAMAVGVGLAFLQVNIIATALAIGCATLIMSTLGMMIGRFIGP MLGKRAEILGGVVLIGIGVQILWTHFHG
Sequences:
>Translated_188_residues MHFTATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFGAVETLTPLIGWGLGILASKFVLEWNHWIAFVLLIFL GGRMIIEGIRGGSDEDETPLRRHSFWLLVTTAIATSLDAMAVGVGLAFLQVNIIATALAIGCATLIMSTLGMMIGRFIGP MLGKRAEILGGVVLIGIGVQILWTHFHG >Mature_188_residues MHFTATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFGAVETLTPLIGWGLGILASKFVLEWNHWIAFVLLIFL GGRMIIEGIRGGSDEDETPLRRHSFWLLVTTAIATSLDAMAVGVGLAFLQVNIIATALAIGCATLIMSTLGMMIGRFIGP MLGKRAEILGGVVLIGIGVQILWTHFHG
Specific function: Unknown
COG id: COG1971
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0059 family [H]
Homologues:
Organism=Escherichia coli, GI87081981, Length=188, Percent_Identity=90.9574468085106, Blast_Score=338, Evalue=1e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003810 - InterPro: IPR022929 [H]
Pfam domain/function: PF02659 DUF204 [H]
EC number: NA
Molecular weight: Translated: 20049; Mature: 20049
Theoretical pI: Translated: 8.57; Mature: 8.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFTATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFGAVETLTPLIGWGLGIL CCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASKFVLEWNHWIAFVLLIFLGGRMIIEGIRGGSDEDETPLRRHSFWLLVTTAIATSLDAM HHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH AVGVGLAFLQVNIIATALAIGCATLIMSTLGMMIGRFIGPMLGKRAEILGGVVLIGIGVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH ILWTHFHG HHHHHCCC >Mature Secondary Structure MHFTATVLLAFGMSMDAFAASIGKGATLHKPKFSEALRTGLIFGAVETLTPLIGWGLGIL CCHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASKFVLEWNHWIAFVLLIFLGGRMIIEGIRGGSDEDETPLRRHSFWLLVTTAIATSLDAM HHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH AVGVGLAFLQVNIIATALAIGCATLIMSTLGMMIGRFIGPMLGKRAEILGGVVLIGIGVQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH ILWTHFHG HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA