Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
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Accession | NC_011094 |
Length | 4,709,075 |
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The map label for this gene is 194735095
Identifier: 194735095
GI number: 194735095
Start: 401567
End: 402310
Strand: Direct
Name: 194735095
Synonym: SeSA_A0397
Alternate gene names: NA
Gene position: 401567-402310 (Clockwise)
Preceding gene: 194736853
Following gene: 194735944
Centisome position: 8.53
GC content: 40.73
Gene sequence:
>744_bases ATGAGTCAGAACAATTATCTGATTGACAAAAGAGTTATTCTTGATTGTGAACGAATGACGCTTTCCTGCGCCGGAGAGTC GATAACGATATCTGAATCGGAACGCAGTTTGCTTATCGCTTTTCATGAAGGCCTTTTTAAAAAAGATGATTTAATTAACT ATGTCTGGGGGCGCAAAGGTGTCGTGGTCTCTGATGCCAGTTATTATAAACTGATTAACCAGCTACGAGGATCATTTGAT AAAATAGGCCTTAAGGGGGCGTCTGTTGTGACTCGCCCTCGCGTGGGTGTTTTACTCTCAGTTTCCATTGAACCGTTGAG TGATGAGGCGCAAAATACGCCGTTGCCTGCTGTTGCTGAAACAGAATTATCGACGGTTGAAGTGCGACACGATGACACTA TTATTACCCCAATACCGGGCGCTGTGAATAAAAAAGATTGGCTCTACTTTTGCCTGGCCGCGCTTCTGATGTTTTTTATG ATGTATAAAGTTAAGGGTGAAAATATTGATTACTTTACCCTCCAGGGTTCGTATGATGGATACACTTTTTATAGTGTCGG GCATGATAAAACCCATCTGACGGATATCGTTGAAGCGTACTCCGAGATGAGCAATGAAATACATAAACAAAACGGAAAAA TCATTTATTACATTCGCGTTCCTAATACAAATATTTTTGTCCAGTGTCTTAACCAACTTGATATAGCGGAGCCGAAATGC ATTTCCATAAAAGAACGTTATTAA
Upstream 100 bases:
>100_bases ATACAGGAGCTCGCTACGGAAAAAAATTCAATAGCGCGATATATCCTGGTAATATGTTTATGCCGTGAAGAAACGTGATA GCACTGGGGCGGATATTTTT
Downstream 100 bases:
>100_bases GCGTGGCGACGCTTGGTATGTTGGCTGTTTCAGTCGTACTGATGGTAGTTTGGGTACGAAACAGTAACCATAGTTCTATT AATACTAATGAATTTTTATG
Product: putative response regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Inner Membrane Protein
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MSQNNYLIDKRVILDCERMTLSCAGESITISESERSLLIAFHEGLFKKDDLINYVWGRKGVVVSDASYYKLINQLRGSFD KIGLKGASVVTRPRVGVLLSVSIEPLSDEAQNTPLPAVAETELSTVEVRHDDTIITPIPGAVNKKDWLYFCLAALLMFFM MYKVKGENIDYFTLQGSYDGYTFYSVGHDKTHLTDIVEAYSEMSNEIHKQNGKIIYYIRVPNTNIFVQCLNQLDIAEPKC ISIKERY
Sequences:
>Translated_247_residues MSQNNYLIDKRVILDCERMTLSCAGESITISESERSLLIAFHEGLFKKDDLINYVWGRKGVVVSDASYYKLINQLRGSFD KIGLKGASVVTRPRVGVLLSVSIEPLSDEAQNTPLPAVAETELSTVEVRHDDTIITPIPGAVNKKDWLYFCLAALLMFFM MYKVKGENIDYFTLQGSYDGYTFYSVGHDKTHLTDIVEAYSEMSNEIHKQNGKIIYYIRVPNTNIFVQCLNQLDIAEPKC ISIKERY >Mature_246_residues SQNNYLIDKRVILDCERMTLSCAGESITISESERSLLIAFHEGLFKKDDLINYVWGRKGVVVSDASYYKLINQLRGSFDK IGLKGASVVTRPRVGVLLSVSIEPLSDEAQNTPLPAVAETELSTVEVRHDDTIITPIPGAVNKKDWLYFCLAALLMFFMM YKVKGENIDYFTLQGSYDGYTFYSVGHDKTHLTDIVEAYSEMSNEIHKQNGKIIYYIRVPNTNIFVQCLNQLDIAEPKCI SIKERY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28033; Mature: 27901
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQNNYLIDKRVILDCERMTLSCAGESITISESERSLLIAFHEGLFKKDDLINYVWGRKG CCCCCEEEEEEEEEEECCEEEEECCCEEEEECCCCEEEEEEECCCCCCCCHHHHHCCCCC VVVSDASYYKLINQLRGSFDKIGLKGASVVTRPRVGVLLSVSIEPLSDEAQNTPLPAVAE EEEECHHHHHHHHHHCCCHHHCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCEEC TELSTVEVRHDDTIITPIPGAVNKKDWLYFCLAALLMFFMMYKVKGENIDYFTLQGSYDG CCCEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC YTFYSVGHDKTHLTDIVEAYSEMSNEIHKQNGKIIYYIRVPNTNIFVQCLNQLDIAEPKC EEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCE ISIKERY EEEECCC >Mature Secondary Structure SQNNYLIDKRVILDCERMTLSCAGESITISESERSLLIAFHEGLFKKDDLINYVWGRKG CCCCEEEEEEEEEEECCEEEEECCCEEEEECCCCEEEEEEECCCCCCCCHHHHHCCCCC VVVSDASYYKLINQLRGSFDKIGLKGASVVTRPRVGVLLSVSIEPLSDEAQNTPLPAVAE EEEECHHHHHHHHHHCCCHHHCCCCCCCEEECCCCCEEEEEEECCCCCCCCCCCCCCEEC TELSTVEVRHDDTIITPIPGAVNKKDWLYFCLAALLMFFMMYKVKGENIDYFTLQGSYDG CCCEEEEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC YTFYSVGHDKTHLTDIVEAYSEMSNEIHKQNGKIIYYIRVPNTNIFVQCLNQLDIAEPKC EEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCCCCE ISIKERY EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA