Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
---|---|
Accession | NC_011094 |
Length | 4,709,075 |
Click here to switch to the map view.
The map label for this gene is rlmG [H]
Identifier: 194735079
GI number: 194735079
Start: 3295881
End: 3297017
Strand: Reverse
Name: rlmG [H]
Synonym: SeSA_A3411
Alternate gene names: 194735079
Gene position: 3297017-3295881 (Counterclockwise)
Preceding gene: 194736297
Following gene: 194737278
Centisome position: 70.01
GC content: 53.56
Gene sequence:
>1137_bases ATGAGCCACGTAGACGACGGTTTCCGTTCACTGACGCTGAAACGTTTTCCGCAAACGGATGATGTTAACCCGCTTCTGGC GTGGGAGGCGGCCGATGAGTATCTGCTGCAACAGTTGGATGAGACGGAAATTCGCGGCCCGGTGCTGATCCTGAATGATA CGTTTGGCGCGCTAAGCTGTGCGCTGGCGGAGCATTCGCCATACAGTATTGGCGATTCGTATTTAAGCGAACTGGGTACG CGAGAGAATTTACGCCATAACGGCATCGCGGAGTCCAGCGTAACGTTTCTCGACAGTACCGCTGACTACCCGCAGGCGCC GGGCGTGGTATTGATTAAGGTACCGAAAACACTGGCGTTGCTGGAACAGCAGTTACGCGCTTTGCGTAAGGTCGTTACGG CGCAAACGCGTATTATCGCCGGCGCGAAAGCGCGTGATATTCATACCTCTACGCTGGAACTGTTTGAAAAAGTGCTGGGC CCAACCACGACGACGCTGGCGTGGAAGAAAGCGCGCCTGATTAACTGTACCTTCAGTCATCCGCAACTGGCCGACGCGCC GCAAACGCTAAGCTGGAAACTGGAAGATACAGGCTGGACGATTCACAACCACGCGAATGTGTTTTCTCGTACCGGATTGG ATATCGGCGCGCGCTTCTTTATGCAGCATTTGCCGGAAAACCTCGACGGGGAGATTGTCGATCTCGGCTGCGGCAATGGG GTGATTGGCCTGAGCTTACTGGCGAAAAATCCGCAGGCGAACGTGGTATTTGTCGATGAATCGCCGATGGCGGTAGATTC CAGCCGTTTGAATGTAGAAACGAACCTGCCGGAAGCGTTCGAACGCTGCGAATTTATGATCAACAATGCGCTCTCCGGCG TGGAGCCGTTCCGTTTTAACGCTGTGTTCTGCAACCCGCCGTTCCACCAGAAACATGCGCTGACGGATAATATCGCCTGG GAGATGTTCCATCACGCCCGCCGTTGCCTGAAAATCAACGGCGAACTGTATATTGTGGCGAACCGCCATCTGGACTATTT CCACAAGCTGAAGAAGATTTTCGGTAATTGCGCGACGATAGCAACCAACAATAAATTTGTTATTTTGAAAGCGGTGAAGC AGGGGCGCCGTCGATAA
Upstream 100 bases:
>100_bases AGTTAGTGAGGTCATCAAAGCTCCATGTTGCTGATAAAAAGTGTATACTCACGCACCCTTTTCAGGGATAACGCCGCAAT TTTACCATTCAGGAGGCCTA
Downstream 100 bases:
>100_bases GGCGCTCAAGCGTCATACCGGCCTATAAAACCGGTATGACGGTGTAAGCCCGATAAGCGCAGCGCCATCAGGTAAAGTCG TTAAATCTCCAGCGCCAGTC
Product: methyltransferase family protein
Products: NA
Alternate protein names: 23S rRNA m2G1835 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rlmG [H]
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MSHVDDGFRSLTLKRFPQTDDVNPLLAWEAADEYLLQQLDETEIRGPVLILNDTFGALSCALAEHSPYSIGDSYLSELGT RENLRHNGIAESSVTFLDSTADYPQAPGVVLIKVPKTLALLEQQLRALRKVVTAQTRIIAGAKARDIHTSTLELFEKVLG PTTTTLAWKKARLINCTFSHPQLADAPQTLSWKLEDTGWTIHNHANVFSRTGLDIGARFFMQHLPENLDGEIVDLGCGNG VIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNALSGVEPFRFNAVFCNPPFHQKHALTDNIAW EMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCATIATNNKFVILKAVKQGRRR
Sequences:
>Translated_378_residues MSHVDDGFRSLTLKRFPQTDDVNPLLAWEAADEYLLQQLDETEIRGPVLILNDTFGALSCALAEHSPYSIGDSYLSELGT RENLRHNGIAESSVTFLDSTADYPQAPGVVLIKVPKTLALLEQQLRALRKVVTAQTRIIAGAKARDIHTSTLELFEKVLG PTTTTLAWKKARLINCTFSHPQLADAPQTLSWKLEDTGWTIHNHANVFSRTGLDIGARFFMQHLPENLDGEIVDLGCGNG VIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNALSGVEPFRFNAVFCNPPFHQKHALTDNIAW EMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCATIATNNKFVILKAVKQGRRR >Mature_377_residues SHVDDGFRSLTLKRFPQTDDVNPLLAWEAADEYLLQQLDETEIRGPVLILNDTFGALSCALAEHSPYSIGDSYLSELGTR ENLRHNGIAESSVTFLDSTADYPQAPGVVLIKVPKTLALLEQQLRALRKVVTAQTRIIAGAKARDIHTSTLELFEKVLGP TTTTLAWKKARLINCTFSHPQLADAPQTLSWKLEDTGWTIHNHANVFSRTGLDIGARFFMQHLPENLDGEIVDLGCGNGV IGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNALSGVEPFRFNAVFCNPPFHQKHALTDNIAWE MFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCATIATNNKFVILKAVKQGRRR
Specific function: Specifically methylates the guanosine in position 1835 (m2G1835) of 23S rRNA [H]
COG id: COG2813
COG function: function code J; 16S RNA G1207 methylase RsmC
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily. RlmG family [H]
Homologues:
Organism=Escherichia coli, GI87082206, Length=378, Percent_Identity=90.7407407407407, Blast_Score=721, Evalue=0.0, Organism=Escherichia coli, GI1790830, Length=175, Percent_Identity=33.1428571428571, Blast_Score=100, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR017237 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: =2.1.1.174 [H]
Molecular weight: Translated: 42273; Mature: 42142
Theoretical pI: Translated: 7.02; Mature: 7.02
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHVDDGFRSLTLKRFPQTDDVNPLLAWEAADEYLLQQLDETEIRGPVLILNDTFGALSC CCCCCCHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHCCCHHCCCCEEEEECCCCHHHH ALAEHSPYSIGDSYLSELGTRENLRHNGIAESSVTFLDSTADYPQAPGVVLIKVPKTLAL HHHCCCCCCCCHHHHHHCCCHHCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCHHHHH LEQQLRALRKVVTAQTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFSH HHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCCCCCEEECEEEEEEECCC PQLADAPQTLSWKLEDTGWTIHNHANVFSRTGLDIGARFFMQHLPENLDGEIVDLGCGNG CCCCCCCCCEEEEECCCCEEEECCCCHHHHCCHHHHHHHHHHHCCCCCCCCEEEECCCCC VIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNALSGVEPFRFN EEEEEEEECCCCCCEEEECCCCCEECCCCEEEECCCHHHHHHHHHHHHHHHCCCCCEEEE AVFCNPPFHQKHALTDNIAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCATI EEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCHHHHHHHHHHHCCEEEE ATNNKFVILKAVKQGRRR EECCCEEEEEEHHCCCCC >Mature Secondary Structure SHVDDGFRSLTLKRFPQTDDVNPLLAWEAADEYLLQQLDETEIRGPVLILNDTFGALSC CCCCCHHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHCCCHHCCCCEEEEECCCCHHHH ALAEHSPYSIGDSYLSELGTRENLRHNGIAESSVTFLDSTADYPQAPGVVLIKVPKTLAL HHHCCCCCCCCHHHHHHCCCHHCCCCCCCCCCCEEEEECCCCCCCCCCEEEEECCHHHHH LEQQLRALRKVVTAQTRIIAGAKARDIHTSTLELFEKVLGPTTTTLAWKKARLINCTFSH HHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCCCCCEEECEEEEEEECCC PQLADAPQTLSWKLEDTGWTIHNHANVFSRTGLDIGARFFMQHLPENLDGEIVDLGCGNG CCCCCCCCCEEEEECCCCEEEECCCCHHHHCCHHHHHHHHHHHCCCCCCCCEEEECCCCC VIGLSLLAKNPQANVVFVDESPMAVDSSRLNVETNLPEAFERCEFMINNALSGVEPFRFN EEEEEEEECCCCCCEEEECCCCCEECCCCEEEECCCHHHHHHHHHHHHHHHCCCCCEEEE AVFCNPPFHQKHALTDNIAWEMFHHARRCLKINGELYIVANRHLDYFHKLKKIFGNCATI EEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCEEEEEECCCHHHHHHHHHHHCCEEEE ATNNKFVILKAVKQGRRR EECCCEEEEEEHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA