Click here to switch to the map view.

The map label for this gene is yecM [H]

Identifier: 194735036

GI number: 194735036

Start: 1979671

End: 1980240

Strand: Reverse

Name: yecM [H]

Synonym: SeSA_A2062

Alternate gene names: 194735036

Gene position: 1980240-1979671 (Counterclockwise)

Preceding gene: 194736201

Following gene: 194735535

Centisome position: 42.05

GC content: 53.86

Gene sequence:

>570_bases
ATGGCGAACTGGCAACACATTGATGAACTGCATGATATTTCCGCAGATTTACCGCGATTCACTCTGGCGTTCAGAGAACT
TTCCACTCGCCTTGGTCTGCAGATTAGCGCCCTTGAGGCCGATCACATTTCATTGCGCTGTCACCAGAATACGACGGCGG
AGCGTTGGCGTCGCGGTTTTGAACAATGCGGCGAGCTACTGTCGGAAAATATCATCAACGGCAGGCCGATTTGTCTGTTT
AAACTGCATGAACCGGTATGTGTGGAACACTGGCGGTTTTCTGTTATTGAATTACCGTGGCCGGGAGAAAAACGCTATCC
ACACGAAGGGTGGGAGCATATTGAAATCGTGCTGCCCGGCGAGCCGGAGACCTTGAACGCGCGGGCGCTGGCGTTGTTGT
CGGATGAGGGGCTTAGTCAGCCGGGGATCGTGGTTAAAACCAGTTCGCCACAGGGCGAGCATGAACGTTTGCCAAACCCT
ACGCTGGCCGTGACCGATGGCCGCATCACGGTAAAATTTCATCCATGGTCGATTGAAGCGATTGTCGCCAGCGAACAGGC
GGCCCATTAA

Upstream 100 bases:

>100_bases
CTGCATAAGCATTCAATAAACGCCCAACCAAATCAAAGGTTGGTTGCCGGGGCGCAACAGCGTAAATTAGCGGTTTTCAC
AGCAAGAAGAGCGTCCTGAT

Downstream 100 bases:

>100_bases
CCTGCCGAGCGGAGTGAATATGGCGTTACTTGAGATCTGTTGTTACAGCATGGAATGCGCGCTCACCGCGCAGCGAAACG
GCGCGGATCGTATCGAACTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MANWQHIDELHDISADLPRFTLAFRELSTRLGLQISALEADHISLRCHQNTTAERWRRGFEQCGELLSENIINGRPICLF
KLHEPVCVEHWRFSVIELPWPGEKRYPHEGWEHIEIVLPGEPETLNARALALLSDEGLSQPGIVVKTSSPQGEHERLPNP
TLAVTDGRITVKFHPWSIEAIVASEQAAH

Sequences:

>Translated_189_residues
MANWQHIDELHDISADLPRFTLAFRELSTRLGLQISALEADHISLRCHQNTTAERWRRGFEQCGELLSENIINGRPICLF
KLHEPVCVEHWRFSVIELPWPGEKRYPHEGWEHIEIVLPGEPETLNARALALLSDEGLSQPGIVVKTSSPQGEHERLPNP
TLAVTDGRITVKFHPWSIEAIVASEQAAH
>Mature_188_residues
ANWQHIDELHDISADLPRFTLAFRELSTRLGLQISALEADHISLRCHQNTTAERWRRGFEQCGELLSENIINGRPICLFK
LHEPVCVEHWRFSVIELPWPGEKRYPHEGWEHIEIVLPGEPETLNARALALLSDEGLSQPGIVVKTSSPQGEHERLPNPT
LAVTDGRITVKFHPWSIEAIVASEQAAH

Specific function: Unknown

COG id: COG3102

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1582/HI_1581 [H]

Homologues:

Organism=Escherichia coli, GI87081996, Length=188, Percent_Identity=84.5744680851064, Blast_Score=332, Evalue=7e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010393 [H]

Pfam domain/function: PF06185 YecM [H]

EC number: NA

Molecular weight: Translated: 21454; Mature: 21322

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: PS00414 PROFILIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANWQHIDELHDISADLPRFTLAFRELSTRLGLQISALEADHISLRCHQNTTAERWRRGF
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEECCEEEEEECCCCCHHHHHHHH
EQCGELLSENIINGRPICLFKLHEPVCVEHWRFSVIELPWPGEKRYPHEGWEHIEIVLPG
HHHHHHHHHHCCCCCCEEEEEECCCCEECCCCEEEEECCCCCCCCCCCCCCCEEEEEECC
EPETLNARALALLSDEGLSQPGIVVKTSSPQGEHERLPNPTLAVTDGRITVKFHPWSIEA
CCCCCCCEEEEEECCCCCCCCCEEEEECCCCCHHHCCCCCEEEEECCEEEEEECCCEEEE
IVASEQAAH
EEECCCCCC
>Mature Secondary Structure 
ANWQHIDELHDISADLPRFTLAFRELSTRLGLQISALEADHISLRCHQNTTAERWRRGF
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEECCEEEEEECCCCCHHHHHHHH
EQCGELLSENIINGRPICLFKLHEPVCVEHWRFSVIELPWPGEKRYPHEGWEHIEIVLPG
HHHHHHHHHHCCCCCCEEEEEECCCCEECCCCEEEEECCCCCCCCCCCCCCCEEEEEECC
EPETLNARALALLSDEGLSQPGIVVKTSSPQGEHERLPNPTLAVTDGRITVKFHPWSIEA
CCCCCCCEEEEEECCCCCCCCCEEEEECCCCCHHHCCCCCEEEEECCEEEEEECCCEEEE
IVASEQAAH
EEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 10493123 [H]