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The map label for this gene is ydiY [H]

Identifier: 194734160

GI number: 194734160

Start: 1372869

End: 1373594

Strand: Direct

Name: ydiY [H]

Synonym: SeSA_A1424

Alternate gene names: 194734160

Gene position: 1372869-1373594 (Clockwise)

Preceding gene: 194734452

Following gene: 194737240

Centisome position: 29.15

GC content: 50.83

Gene sequence:

>726_bases
ATGCTGGCGGGTGGCGTGTTCGCGTCTCTGTATGCCGCCGCCGATGATTCCGTTTTTACTGTCATGGATGATCCCTCCAC
CGCGAAAAAACCTTTTGAAGGTAATCTGAATGCGGGCTACCTTGCTCAGTCAGGCAATACTAAAAGTTCTTCCTTAACGG
CTGACACGGCGATGACCTGGTATGGACAACGTACCGCCTGGTCATTATGGGGCAATGCCAGCAATACCTCCTCTAATGAT
GAACGCTCTTCAGAAAAATATGCGGTAGGCGCGCGTAACCGTTTTAATATGACGGATTATGATTATACCTTTGGCCAGGC
CAGTTGGCTGACAGACCGTTTCAACGGTTATCGTCAGCGCGACGTACTGACCGCCGGTTACGGGCGGCAGTTCCTTAATG
GTCCAGTGCACAGCTTCCGTTTTGAATTCGGTCCAGGGGTTCGCTATGACGAACATACGGACGATACCACTGAAACGCAG
CCGTTGGGTTATGCTTCCGGCAGCTATGCCTGGCAGTTAACTGACAATGCTAAGTTTACACAGGGGGTGTCAGTATTTGG
CGCAGAAGACACCACACTAAATTCGGAAACAGCCCTCAATGTCGCCATTAACGAACATTTTGGTCTAAAGGTGGGGTATA
ATTTAACGTGGAACTCGCAGCCGCCTGAATCAGCGCCGGAACATACCGATCGCCGCACTACGGTAACGCTGGGCTATAAG
ATGTAA

Upstream 100 bases:

>100_bases
CATTGATCCCTATGAAAGTTTCCGGGACCGTCGTGGTCTCTTTTTTAGTTGTACGGACTCTATATAAATGAAGCTTTTGA
AGGCAGTACCCGCTGTAGTT

Downstream 100 bases:

>100_bases
TATTGTACCGGGTTACATTACGTAACCCGGTTATTCCGTGGTGACGCCTCAGAAGAAGAAGGTGATGTCGCCGTTGATAT
AAGAATAGTCGTCTCCGGTG

Product: putative outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MLAGGVFASLYAAADDSVFTVMDDPSTAKKPFEGNLNAGYLAQSGNTKSSSLTADTAMTWYGQRTAWSLWGNASNTSSND
ERSSEKYAVGARNRFNMTDYDYTFGQASWLTDRFNGYRQRDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDEHTDDTTETQ
PLGYASGSYAWQLTDNAKFTQGVSVFGAEDTTLNSETALNVAINEHFGLKVGYNLTWNSQPPESAPEHTDRRTTVTLGYK
M

Sequences:

>Translated_241_residues
MLAGGVFASLYAAADDSVFTVMDDPSTAKKPFEGNLNAGYLAQSGNTKSSSLTADTAMTWYGQRTAWSLWGNASNTSSND
ERSSEKYAVGARNRFNMTDYDYTFGQASWLTDRFNGYRQRDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDEHTDDTTETQ
PLGYASGSYAWQLTDNAKFTQGVSVFGAEDTTLNSETALNVAINEHFGLKVGYNLTWNSQPPESAPEHTDRRTTVTLGYK
M
>Mature_241_residues
MLAGGVFASLYAAADDSVFTVMDDPSTAKKPFEGNLNAGYLAQSGNTKSSSLTADTAMTWYGQRTAWSLWGNASNTSSND
ERSSEKYAVGARNRFNMTDYDYTFGQASWLTDRFNGYRQRDVLTAGYGRQFLNGPVHSFRFEFGPGVRYDEHTDDTTETQ
PLGYASGSYAWQLTDNAKFTQGVSVFGAEDTTLNSETALNVAINEHFGLKVGYNLTWNSQPPESAPEHTDRRTTVTLGYK
M

Specific function: Unknown

COG id: COG3137

COG function: function code M; Putative salt-induced outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788016, Length=241, Percent_Identity=88.7966804979253, Blast_Score=453, Evalue=1e-129,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007433 [H]

Pfam domain/function: PF04338 DUF481 [H]

EC number: NA

Molecular weight: Translated: 26624; Mature: 26624

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAGGVFASLYAAADDSVFTVMDDPSTAKKPFEGNLNAGYLAQSGNTKSSSLTADTAMTW
CCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCEEEE
YGQRTAWSLWGNASNTSSNDERSSEKYAVGARNRFNMTDYDYTFGQASWLTDRFNGYRQR
CCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCHH
DVLTAGYGRQFLNGPVHSFRFEFGPGVRYDEHTDDTTETQPLGYASGSYAWQLTDNAKFT
CEEECCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
QGVSVFGAEDTTLNSETALNVAINEHFGLKVGYNLTWNSQPPESAPEHTDRRTTVTLGYK
CCEEEECCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEE
M
C
>Mature Secondary Structure
MLAGGVFASLYAAADDSVFTVMDDPSTAKKPFEGNLNAGYLAQSGNTKSSSLTADTAMTW
CCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCEEECCEEEE
YGQRTAWSLWGNASNTSSNDERSSEKYAVGARNRFNMTDYDYTFGQASWLTDRFNGYRQR
CCCCEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCHH
DVLTAGYGRQFLNGPVHSFRFEFGPGVRYDEHTDDTTETQPLGYASGSYAWQLTDNAKFT
CEEECCCCHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC
QGVSVFGAEDTTLNSETALNVAINEHFGLKVGYNLTWNSQPPESAPEHTDRRTTVTLGYK
CCEEEECCCCCCCCCCEEEEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEE
M
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]