Definition Prosthecochloris aestuarii DSM 271 chromosome, complete genome.
Accession NC_011059
Length 2,512,923

Click here to switch to the map view.

The map label for this gene is 194334644

Identifier: 194334644

GI number: 194334644

Start: 2018679

End: 2019914

Strand: Reverse

Name: 194334644

Synonym: Paes_1845

Alternate gene names: NA

Gene position: 2019914-2018679 (Counterclockwise)

Preceding gene: 194334645

Following gene: 194334643

Centisome position: 80.38

GC content: 51.46

Gene sequence:

>1236_bases
ATGAGCTACTATGAGAAGAATGGCGGCGTTGCGGTCTGGTCGTTCAGAGAAAGTATCTTGTTTACCGTCATCCTGCTTCT
TTCGGGCCTGGTGCTTGAGTTGCTGGGCGGAGGTAACGGTGTTTCCCTGCCGTCCTGGCCTTTGAATGCGATCTGGCTTT
CAGGGATTGTCTCTGGTATTGTTATCGCAGGGATCTGGGGTCGTCAGCATTGGTTTATTGCCTGGCTTGGCGGCATTCCC
CTCGGTCTTTCTCTTATTTTTGCTCTCGCGTTTCTTTCATTTTTCGGGGGCGTTCTGCCTCAGGAGCAGGGAGTGGGTTC
TGAATGGGTCCTGAGGTTCAGGTTCAATCAGGTCTTTTCGAGCTGGCCTTTCGCCCTTGTTGTACTCTTTTTCATGATCA
ATCTCGGCCTCTCGCTGGTCTGGAAGCTTGTTCCTTTCAGGAGATCGAACCTGCAGTTTATTTTGTTTCATGCAGGTTTC
TGGATTGCCCTGACATGCGGTCTTTTCGGAGCATCCGATCTTCAGCGTGTCATCATTCCTCTTTATGAGGGGGAAGCTTC
GTCGCGAGGATATCATGCAGGAACCAAGAGAACGGTTGATCTTCCGTTTTCTCTCCATCTGAATGATTTCGAGATGGAGG
AGTATGCGCCCCAACTGGGGTTATACGATCCATCGCGAGACCGTCTGGAAGCTGAGTCTTCAAATGCCGTTCTGCAGGTC
GACAAGGGAGTGAAGGCTTCATGGCCTGAGCTGCAGGTAGAGGTCGAAACCTATTTTCCTCACGCATTGAAGGACCCGCA
GGGCAAGCCGGTTCCTTCCGATACTCTTGCTGGAACGCCCTATGCCTTCATCAGGGGGACATTCAAAGGGAAGCCGTTTT
CCGGCTGGGTCAGTACCGGAAGCCCGCACGAAGAGCCAGTCTTCATCGTTCTCGACAGAAAACTGCTTGTCCTGATTCCC
GGGTCGGCTAAAAAATACCGTTCCGAGGTTATGATCCGCGATGAGCGTGACAACCCTCACCAGGTGCTGCTGGAAGTCAA
CAGGCCGGTCAGCATTAACGGATGGAAACTCTATCAGATGGGATATGATGTGGAGGCGGGACGATGGTCGAAGCTCAGTC
TTGTCGAAGGGGTTCGCGATCCCTGGCTTCCGGCAGTTTACACAGGCTTTTTTATGATTCTGATCGGCAATGTTCTCTTT
TTCTGGAAAGGTATGAAAAAAACCAGGGTATTATGA

Upstream 100 bases:

>100_bases
CCGTATGATTGTCTGCAAATGCTGTCAGTTGATTTCCCAGGCTGAGGAGGATGGTAAAGGATTGTGTCACGATAATACGT
AATTCCGGGAATCTGTTCGT

Downstream 100 bases:

>100_bases
CGTGGGTCGAGTTTCCTTATGCCGCATATACCGCCATAGCCTTCTGGGCATGCGGCGGGGCAGTTTCTCTTGCCGGGGTC
AGAAAGCCAGGGCTGAAGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 411; Mature: 410

Protein sequence:

>411_residues
MSYYEKNGGVAVWSFRESILFTVILLLSGLVLELLGGGNGVSLPSWPLNAIWLSGIVSGIVIAGIWGRQHWFIAWLGGIP
LGLSLIFALAFLSFFGGVLPQEQGVGSEWVLRFRFNQVFSSWPFALVVLFFMINLGLSLVWKLVPFRRSNLQFILFHAGF
WIALTCGLFGASDLQRVIIPLYEGEASSRGYHAGTKRTVDLPFSLHLNDFEMEEYAPQLGLYDPSRDRLEAESSNAVLQV
DKGVKASWPELQVEVETYFPHALKDPQGKPVPSDTLAGTPYAFIRGTFKGKPFSGWVSTGSPHEEPVFIVLDRKLLVLIP
GSAKKYRSEVMIRDERDNPHQVLLEVNRPVSINGWKLYQMGYDVEAGRWSKLSLVEGVRDPWLPAVYTGFFMILIGNVLF
FWKGMKKTRVL

Sequences:

>Translated_411_residues
MSYYEKNGGVAVWSFRESILFTVILLLSGLVLELLGGGNGVSLPSWPLNAIWLSGIVSGIVIAGIWGRQHWFIAWLGGIP
LGLSLIFALAFLSFFGGVLPQEQGVGSEWVLRFRFNQVFSSWPFALVVLFFMINLGLSLVWKLVPFRRSNLQFILFHAGF
WIALTCGLFGASDLQRVIIPLYEGEASSRGYHAGTKRTVDLPFSLHLNDFEMEEYAPQLGLYDPSRDRLEAESSNAVLQV
DKGVKASWPELQVEVETYFPHALKDPQGKPVPSDTLAGTPYAFIRGTFKGKPFSGWVSTGSPHEEPVFIVLDRKLLVLIP
GSAKKYRSEVMIRDERDNPHQVLLEVNRPVSINGWKLYQMGYDVEAGRWSKLSLVEGVRDPWLPAVYTGFFMILIGNVLF
FWKGMKKTRVL
>Mature_410_residues
SYYEKNGGVAVWSFRESILFTVILLLSGLVLELLGGGNGVSLPSWPLNAIWLSGIVSGIVIAGIWGRQHWFIAWLGGIPL
GLSLIFALAFLSFFGGVLPQEQGVGSEWVLRFRFNQVFSSWPFALVVLFFMINLGLSLVWKLVPFRRSNLQFILFHAGFW
IALTCGLFGASDLQRVIIPLYEGEASSRGYHAGTKRTVDLPFSLHLNDFEMEEYAPQLGLYDPSRDRLEAESSNAVLQVD
KGVKASWPELQVEVETYFPHALKDPQGKPVPSDTLAGTPYAFIRGTFKGKPFSGWVSTGSPHEEPVFIVLDRKLLVLIPG
SAKKYRSEVMIRDERDNPHQVLLEVNRPVSINGWKLYQMGYDVEAGRWSKLSLVEGVRDPWLPAVYTGFFMILIGNVLFF
WKGMKKTRVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46152; Mature: 46021

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYYEKNGGVAVWSFRESILFTVILLLSGLVLELLGGGNGVSLPSWPLNAIWLSGIVSGI
CCEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
VIAGIWGRQHWFIAWLGGIPLGLSLIFALAFLSFFGGVLPQEQGVGSEWVLRFRFNQVFS
HHEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEEHHHHHHC
SWPFALVVLFFMINLGLSLVWKLVPFRRSNLQFILFHAGFWIALTCGLFGASDLQRVIIP
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHCCCCCHHEEEEE
LYEGEASSRGYHAGTKRTVDLPFSLHLNDFEMEEYAPQLGLYDPSRDRLEAESSNAVLQV
EECCCCCCCCCCCCCCEEEECCEEEECCCCCHHHHCCCCCCCCCCHHHHCCCCCCCEEEE
DKGVKASWPELQVEVETYFPHALKDPQGKPVPSDTLAGTPYAFIRGTFKGKPFSGWVSTG
CCCCCCCCCCEEEEEEEECCHHHCCCCCCCCCCCCCCCCCHHEEEEECCCCCCCCCCCCC
SPHEEPVFIVLDRKLLVLIPGSAKKYRSEVMIRDERDNPHQVLLEVNRPVSINGWKLYQM
CCCCCCEEEEECCEEEEEECCCHHHHHCCEEEECCCCCCCEEEEEECCCEEECCEEEEEE
GYDVEAGRWSKLSLVEGVRDPWLPAVYTGFFMILIGNVLFFWKGMKKTRVL
CCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure 
SYYEKNGGVAVWSFRESILFTVILLLSGLVLELLGGGNGVSLPSWPLNAIWLSGIVSGI
CEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
VIAGIWGRQHWFIAWLGGIPLGLSLIFALAFLSFFGGVLPQEQGVGSEWVLRFRFNQVFS
HHEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEEHHHHHHC
SWPFALVVLFFMINLGLSLVWKLVPFRRSNLQFILFHAGFWIALTCGLFGASDLQRVIIP
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHCCCCCHHEEEEE
LYEGEASSRGYHAGTKRTVDLPFSLHLNDFEMEEYAPQLGLYDPSRDRLEAESSNAVLQV
EECCCCCCCCCCCCCCEEEECCEEEECCCCCHHHHCCCCCCCCCCHHHHCCCCCCCEEEE
DKGVKASWPELQVEVETYFPHALKDPQGKPVPSDTLAGTPYAFIRGTFKGKPFSGWVSTG
CCCCCCCCCCEEEEEEEECCHHHCCCCCCCCCCCCCCCCCHHEEEEECCCCCCCCCCCCC
SPHEEPVFIVLDRKLLVLIPGSAKKYRSEVMIRDERDNPHQVLLEVNRPVSINGWKLYQM
CCCCCCEEEEECCEEEEEECCCHHHHHCCEEEECCCCCCCEEEEEECCCEEECCEEEEEE
GYDVEAGRWSKLSLVEGVRDPWLPAVYTGFFMILIGNVLFFWKGMKKTRVL
CCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA