Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
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Accession | NC_011059 |
Length | 2,512,923 |
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The map label for this gene is 194334644
Identifier: 194334644
GI number: 194334644
Start: 2018679
End: 2019914
Strand: Reverse
Name: 194334644
Synonym: Paes_1845
Alternate gene names: NA
Gene position: 2019914-2018679 (Counterclockwise)
Preceding gene: 194334645
Following gene: 194334643
Centisome position: 80.38
GC content: 51.46
Gene sequence:
>1236_bases ATGAGCTACTATGAGAAGAATGGCGGCGTTGCGGTCTGGTCGTTCAGAGAAAGTATCTTGTTTACCGTCATCCTGCTTCT TTCGGGCCTGGTGCTTGAGTTGCTGGGCGGAGGTAACGGTGTTTCCCTGCCGTCCTGGCCTTTGAATGCGATCTGGCTTT CAGGGATTGTCTCTGGTATTGTTATCGCAGGGATCTGGGGTCGTCAGCATTGGTTTATTGCCTGGCTTGGCGGCATTCCC CTCGGTCTTTCTCTTATTTTTGCTCTCGCGTTTCTTTCATTTTTCGGGGGCGTTCTGCCTCAGGAGCAGGGAGTGGGTTC TGAATGGGTCCTGAGGTTCAGGTTCAATCAGGTCTTTTCGAGCTGGCCTTTCGCCCTTGTTGTACTCTTTTTCATGATCA ATCTCGGCCTCTCGCTGGTCTGGAAGCTTGTTCCTTTCAGGAGATCGAACCTGCAGTTTATTTTGTTTCATGCAGGTTTC TGGATTGCCCTGACATGCGGTCTTTTCGGAGCATCCGATCTTCAGCGTGTCATCATTCCTCTTTATGAGGGGGAAGCTTC GTCGCGAGGATATCATGCAGGAACCAAGAGAACGGTTGATCTTCCGTTTTCTCTCCATCTGAATGATTTCGAGATGGAGG AGTATGCGCCCCAACTGGGGTTATACGATCCATCGCGAGACCGTCTGGAAGCTGAGTCTTCAAATGCCGTTCTGCAGGTC GACAAGGGAGTGAAGGCTTCATGGCCTGAGCTGCAGGTAGAGGTCGAAACCTATTTTCCTCACGCATTGAAGGACCCGCA GGGCAAGCCGGTTCCTTCCGATACTCTTGCTGGAACGCCCTATGCCTTCATCAGGGGGACATTCAAAGGGAAGCCGTTTT CCGGCTGGGTCAGTACCGGAAGCCCGCACGAAGAGCCAGTCTTCATCGTTCTCGACAGAAAACTGCTTGTCCTGATTCCC GGGTCGGCTAAAAAATACCGTTCCGAGGTTATGATCCGCGATGAGCGTGACAACCCTCACCAGGTGCTGCTGGAAGTCAA CAGGCCGGTCAGCATTAACGGATGGAAACTCTATCAGATGGGATATGATGTGGAGGCGGGACGATGGTCGAAGCTCAGTC TTGTCGAAGGGGTTCGCGATCCCTGGCTTCCGGCAGTTTACACAGGCTTTTTTATGATTCTGATCGGCAATGTTCTCTTT TTCTGGAAAGGTATGAAAAAAACCAGGGTATTATGA
Upstream 100 bases:
>100_bases CCGTATGATTGTCTGCAAATGCTGTCAGTTGATTTCCCAGGCTGAGGAGGATGGTAAAGGATTGTGTCACGATAATACGT AATTCCGGGAATCTGTTCGT
Downstream 100 bases:
>100_bases CGTGGGTCGAGTTTCCTTATGCCGCATATACCGCCATAGCCTTCTGGGCATGCGGCGGGGCAGTTTCTCTTGCCGGGGTC AGAAAGCCAGGGCTGAAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MSYYEKNGGVAVWSFRESILFTVILLLSGLVLELLGGGNGVSLPSWPLNAIWLSGIVSGIVIAGIWGRQHWFIAWLGGIP LGLSLIFALAFLSFFGGVLPQEQGVGSEWVLRFRFNQVFSSWPFALVVLFFMINLGLSLVWKLVPFRRSNLQFILFHAGF WIALTCGLFGASDLQRVIIPLYEGEASSRGYHAGTKRTVDLPFSLHLNDFEMEEYAPQLGLYDPSRDRLEAESSNAVLQV DKGVKASWPELQVEVETYFPHALKDPQGKPVPSDTLAGTPYAFIRGTFKGKPFSGWVSTGSPHEEPVFIVLDRKLLVLIP GSAKKYRSEVMIRDERDNPHQVLLEVNRPVSINGWKLYQMGYDVEAGRWSKLSLVEGVRDPWLPAVYTGFFMILIGNVLF FWKGMKKTRVL
Sequences:
>Translated_411_residues MSYYEKNGGVAVWSFRESILFTVILLLSGLVLELLGGGNGVSLPSWPLNAIWLSGIVSGIVIAGIWGRQHWFIAWLGGIP LGLSLIFALAFLSFFGGVLPQEQGVGSEWVLRFRFNQVFSSWPFALVVLFFMINLGLSLVWKLVPFRRSNLQFILFHAGF WIALTCGLFGASDLQRVIIPLYEGEASSRGYHAGTKRTVDLPFSLHLNDFEMEEYAPQLGLYDPSRDRLEAESSNAVLQV DKGVKASWPELQVEVETYFPHALKDPQGKPVPSDTLAGTPYAFIRGTFKGKPFSGWVSTGSPHEEPVFIVLDRKLLVLIP GSAKKYRSEVMIRDERDNPHQVLLEVNRPVSINGWKLYQMGYDVEAGRWSKLSLVEGVRDPWLPAVYTGFFMILIGNVLF FWKGMKKTRVL >Mature_410_residues SYYEKNGGVAVWSFRESILFTVILLLSGLVLELLGGGNGVSLPSWPLNAIWLSGIVSGIVIAGIWGRQHWFIAWLGGIPL GLSLIFALAFLSFFGGVLPQEQGVGSEWVLRFRFNQVFSSWPFALVVLFFMINLGLSLVWKLVPFRRSNLQFILFHAGFW IALTCGLFGASDLQRVIIPLYEGEASSRGYHAGTKRTVDLPFSLHLNDFEMEEYAPQLGLYDPSRDRLEAESSNAVLQVD KGVKASWPELQVEVETYFPHALKDPQGKPVPSDTLAGTPYAFIRGTFKGKPFSGWVSTGSPHEEPVFIVLDRKLLVLIPG SAKKYRSEVMIRDERDNPHQVLLEVNRPVSINGWKLYQMGYDVEAGRWSKLSLVEGVRDPWLPAVYTGFFMILIGNVLFF WKGMKKTRVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46152; Mature: 46021
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYYEKNGGVAVWSFRESILFTVILLLSGLVLELLGGGNGVSLPSWPLNAIWLSGIVSGI CCEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH VIAGIWGRQHWFIAWLGGIPLGLSLIFALAFLSFFGGVLPQEQGVGSEWVLRFRFNQVFS HHEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEEHHHHHHC SWPFALVVLFFMINLGLSLVWKLVPFRRSNLQFILFHAGFWIALTCGLFGASDLQRVIIP CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHCCCCCHHEEEEE LYEGEASSRGYHAGTKRTVDLPFSLHLNDFEMEEYAPQLGLYDPSRDRLEAESSNAVLQV EECCCCCCCCCCCCCCEEEECCEEEECCCCCHHHHCCCCCCCCCCHHHHCCCCCCCEEEE DKGVKASWPELQVEVETYFPHALKDPQGKPVPSDTLAGTPYAFIRGTFKGKPFSGWVSTG CCCCCCCCCCEEEEEEEECCHHHCCCCCCCCCCCCCCCCCHHEEEEECCCCCCCCCCCCC SPHEEPVFIVLDRKLLVLIPGSAKKYRSEVMIRDERDNPHQVLLEVNRPVSINGWKLYQM CCCCCCEEEEECCEEEEEECCCHHHHHCCEEEECCCCCCCEEEEEECCCEEECCEEEEEE GYDVEAGRWSKLSLVEGVRDPWLPAVYTGFFMILIGNVLFFWKGMKKTRVL CCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure SYYEKNGGVAVWSFRESILFTVILLLSGLVLELLGGGNGVSLPSWPLNAIWLSGIVSGI CEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH VIAGIWGRQHWFIAWLGGIPLGLSLIFALAFLSFFGGVLPQEQGVGSEWVLRFRFNQVFS HHEEECCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHEEEEHHHHHHC SWPFALVVLFFMINLGLSLVWKLVPFRRSNLQFILFHAGFWIALTCGLFGASDLQRVIIP CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHCCCCCHHEEEEE LYEGEASSRGYHAGTKRTVDLPFSLHLNDFEMEEYAPQLGLYDPSRDRLEAESSNAVLQV EECCCCCCCCCCCCCCEEEECCEEEECCCCCHHHHCCCCCCCCCCHHHHCCCCCCCEEEE DKGVKASWPELQVEVETYFPHALKDPQGKPVPSDTLAGTPYAFIRGTFKGKPFSGWVSTG CCCCCCCCCCEEEEEEEECCHHHCCCCCCCCCCCCCCCCCHHEEEEECCCCCCCCCCCCC SPHEEPVFIVLDRKLLVLIPGSAKKYRSEVMIRDERDNPHQVLLEVNRPVSINGWKLYQM CCCCCCEEEEECCEEEEEECCCHHHHHCCEEEECCCCCCCEEEEEECCCEEECCEEEEEE GYDVEAGRWSKLSLVEGVRDPWLPAVYTGFFMILIGNVLFFWKGMKKTRVL CCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA