Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
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Accession | NC_011059 |
Length | 2,512,923 |
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The map label for this gene is 194334598
Identifier: 194334598
GI number: 194334598
Start: 1964971
End: 1965477
Strand: Reverse
Name: 194334598
Synonym: Paes_1799
Alternate gene names: NA
Gene position: 1965477-1964971 (Counterclockwise)
Preceding gene: 194334599
Following gene: 194334597
Centisome position: 78.21
GC content: 52.27
Gene sequence:
>507_bases ATGGTCCGGCGCTCTCTTTTTCCATTGCTTTTCCTCTGCATGTTCATGATGCATGGATGTTACAGTTTCAGCGGCTCGTC AGTTCCAGCCCATATCAATACAGTGGCCATACCCTTGTTCGGCGACACCTCCGGAGCAGGTGTCGCCCAGCTCACCATTA AGCTGACCGATATGGTCCATCGGAAGGTAGAGGGAGAGAGCCGACTGCAGATTGAGCCCAACCGTGACCGTGCTGATGCT GTTCTTGAAGGCGTCATTGTTTCCTATAACGACGAAGCAAGCCAGCTCAGCAGCGAAACCGAACGAGCCAGCACCAACCG TATCACGCTTGTTGTCAAAGCGGTATTTCGCGATCGACTTGAAGACAAAGAGCTTTTTCCAACCACAAGTTTCACCGGTT TCGCCGACTATAGCGCAGGAAGTTATGCAGGCCAGCAGGAGGCGATCAGAAGCTCCGTCGAGCAGATCAGCGACGATATT TTCAACGCAATGGTATCGATCTGGTAG
Upstream 100 bases:
>100_bases CGCGCTCAATGGATGGAGAAAAAAAATGCTCTTACTTTCCTGGCCGTTGCGTAAACTGTTGAACAGGATCGACCGCAACA ATTACTAAACCCTTTTCCTC
Downstream 100 bases:
>100_bases CATGAAGCAGGGCGTCGCATGTATTACCGGCAGTACAGATGGCATCGGACGTGCAGCCGCATTTGAACTTGCTGCAGCAG GCCATACCGTCGTGCTGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MVRRSLFPLLFLCMFMMHGCYSFSGSSVPAHINTVAIPLFGDTSGAGVAQLTIKLTDMVHRKVEGESRLQIEPNRDRADA VLEGVIVSYNDEASQLSSETERASTNRITLVVKAVFRDRLEDKELFPTTSFTGFADYSAGSYAGQQEAIRSSVEQISDDI FNAMVSIW
Sequences:
>Translated_168_residues MVRRSLFPLLFLCMFMMHGCYSFSGSSVPAHINTVAIPLFGDTSGAGVAQLTIKLTDMVHRKVEGESRLQIEPNRDRADA VLEGVIVSYNDEASQLSSETERASTNRITLVVKAVFRDRLEDKELFPTTSFTGFADYSAGSYAGQQEAIRSSVEQISDDI FNAMVSIW >Mature_168_residues MVRRSLFPLLFLCMFMMHGCYSFSGSSVPAHINTVAIPLFGDTSGAGVAQLTIKLTDMVHRKVEGESRLQIEPNRDRADA VLEGVIVSYNDEASQLSSETERASTNRITLVVKAVFRDRLEDKELFPTTSFTGFADYSAGSYAGQQEAIRSSVEQISDDI FNAMVSIW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18582; Mature: 18582
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRRSLFPLLFLCMFMMHGCYSFSGSSVPAHINTVAIPLFGDTSGAGVAQLTIKLTDMVH CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHH RKVEGESRLQIEPNRDRADAVLEGVIVSYNDEASQLSSETERASTNRITLVVKAVFRDRL HHCCCCCEEEECCCCCHHHHHHHHHHEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHCC EDKELFPTTSFTGFADYSAGSYAGQQEAIRSSVEQISDDIFNAMVSIW CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVRRSLFPLLFLCMFMMHGCYSFSGSSVPAHINTVAIPLFGDTSGAGVAQLTIKLTDMVH CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHH RKVEGESRLQIEPNRDRADAVLEGVIVSYNDEASQLSSETERASTNRITLVVKAVFRDRL HHCCCCCEEEECCCCCHHHHHHHHHHEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHCC EDKELFPTTSFTGFADYSAGSYAGQQEAIRSSVEQISDDIFNAMVSIW CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA