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The map label for this gene is petC [H]

Identifier: 194334580

GI number: 194334580

Start: 1943231

End: 1943776

Strand: Reverse

Name: petC [H]

Synonym: Paes_1780

Alternate gene names: 194334580

Gene position: 1943776-1943231 (Counterclockwise)

Preceding gene: 194334581

Following gene: 194334579

Centisome position: 77.35

GC content: 52.38

Gene sequence:

>546_bases
ATGGCACAAACAGGTAACTTCAAAAGCCCCAAGAGGCTGGATTCACTTGAGGGTGGTGCTGGTTCTTCCTCCGGCGCTGT
TGCTGCCGGGAAAGCCCGCGAAGACTCCATGTCCGGTCTTGATTTTGAACGCCGCAGTTTCCTTGGCAAAGTTGTCGGCG
GTATCGGTGCGGTTGTTGCAGCAAGCACGCTGTACCCTGTCGTCAAGTACATCATTCCGCCCGCCGCAAAGGAAATGAAA
GAAGTTGACGAACTGGTTGTCGGTAAAGCATCGGAAGTACCGGCCGATACCGGCAAGATCTTCCAGTTCAACAAGGATAA
AGTCATTGTCATCAACAATGGCGGCAAACTGACCGCCTGCAGTGCCGTTTGTACTCATCTCGGTTGTCTCGTGCAGTGGA
AAGAGGATGAGAACCTTATTTATTGTGCCTGCCACGGTGCACGTTACCAGCAGACAGGGGAGATTATTTCCGGTCCTCAG
CCGCTTCCGTTGACACCCTTCAGTGTCAAAGTCGACGGTGACGATCTCGTCGTTTCAAAAGCTTAA

Upstream 100 bases:

>100_bases
GGGTGGTTTCGCTGAACACAGGGCAGCGGAGAGACGCTGTCCCCCGAGGGGTGTGCTCTTGAATTCATAACATCAGTCAT
TAAAAAGGAGATAGATAGTA

Downstream 100 bases:

>100_bases
TATCTAAACACTACTTGAAAATTAAGGGAGTCAGGAAACATGGCTGAAGAAAACAATAAAAACGCTATGGCAGGCAAAGC
CCCGGCAAAGCCGAAACCGG

Product: Plastoquinol--plastocyanin reductase

Products: NA

Alternate protein names: Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein; Rieske iron-sulfur protein; ISP; RISP [H]

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MAQTGNFKSPKRLDSLEGGAGSSSGAVAAGKAREDSMSGLDFERRSFLGKVVGGIGAVVAASTLYPVVKYIIPPAAKEMK
EVDELVVGKASEVPADTGKIFQFNKDKVIVINNGGKLTACSAVCTHLGCLVQWKEDENLIYCACHGARYQQTGEIISGPQ
PLPLTPFSVKVDGDDLVVSKA

Sequences:

>Translated_181_residues
MAQTGNFKSPKRLDSLEGGAGSSSGAVAAGKAREDSMSGLDFERRSFLGKVVGGIGAVVAASTLYPVVKYIIPPAAKEMK
EVDELVVGKASEVPADTGKIFQFNKDKVIVINNGGKLTACSAVCTHLGCLVQWKEDENLIYCACHGARYQQTGEIISGPQ
PLPLTPFSVKVDGDDLVVSKA
>Mature_180_residues
AQTGNFKSPKRLDSLEGGAGSSSGAVAAGKAREDSMSGLDFERRSFLGKVVGGIGAVVAASTLYPVVKYIIPPAAKEMKE
VDELVVGKASEVPADTGKIFQFNKDKVIVINNGGKLTACSAVCTHLGCLVQWKEDENLIYCACHGARYQQTGEIISGPQP
LPLTPFSVKVDGDDLVVSKA

Specific function: Component of the green S-bacteria bc-complex which consists of the Rieske protein and cytochrome b subunit and which appears to lack a cytochrome c1-equivalent. This complex has a comparatively low redox potential [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014909
- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805 [H]

Pfam domain/function: PF08802 CytB6-F_Fe-S; PF00355 Rieske [H]

EC number: =1.10.99.1 [H]

Molecular weight: Translated: 19003; Mature: 18872

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: PS00199 RIESKE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAQTGNFKSPKRLDSLEGGAGSSSGAVAAGKAREDSMSGLDFERRSFLGKVVGGIGAVVA
CCCCCCCCCCHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
ASTLYPVVKYIIPPAAKEMKEVDELVVGKASEVPADTGKIFQFNKDKVIVINNGGKLTAC
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEECCCCEEHH
SAVCTHLGCLVQWKEDENLIYCACHGARYQQTGEIISGPQPLPLTPFSVKVDGDDLVVSK
HHHHHHHHHEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEC
A
C
>Mature Secondary Structure 
AQTGNFKSPKRLDSLEGGAGSSSGAVAAGKAREDSMSGLDFERRSFLGKVVGGIGAVVA
CCCCCCCCCHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
ASTLYPVVKYIIPPAAKEMKEVDELVVGKASEVPADTGKIFQFNKDKVIVINNGGKLTAC
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEEEEEECCCCEEHH
SAVCTHLGCLVQWKEDENLIYCACHGARYQQTGEIISGPQPLPLTPFSVKVDGDDLVVSK
HHHHHHHHHEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA