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The map label for this gene is petB [H]

Identifier: 194334579

GI number: 194334579

Start: 1941923

End: 1943191

Strand: Reverse

Name: petB [H]

Synonym: Paes_1779

Alternate gene names: 194334579

Gene position: 1943191-1941923 (Counterclockwise)

Preceding gene: 194334580

Following gene: 194334577

Centisome position: 77.33

GC content: 54.06

Gene sequence:

>1269_bases
ATGGCTGAAGAAAACAATAAAAACGCTATGGCAGGCAAAGCCCCGGCAAAGCCGAAACCGGCAGCTCCAGGCAAGCCGGC
CCCGGCAAAGCCTGCAGGAGCATCTGCCAAACCAAAACCGGCAGCATCTGTCGCCGGCGGTTCAAAATCCGGAGTGTACA
AGCCTGAAGAAGTTCGTGCAGAAGCCAATCCGTTCAAGCACAGCAAAGAAAATGTTGTCGGAGCATGGGTGCAGCAGCGT
TTCAGCGTTCTCAATCCGATTTTTGCTTACTTGAAGAAAAAAGAAGTACCGCAGCATCGTCTGTCGTTCTGGTACTATTT
TGGTGGCCTCACCCTTTTCTTCTTCATCATCCAGATCATCACCGGTCTTCTTCTTTTGCTCTACTACAGACCGACCGAAG
CAGAAGCATTCGCCCGCTTCGTCTACATTCAGACCGAAGTCCCTTACGGCTGGCTCATCCGCCAGGTCCACGCCTGGTCA
GCCAACCTCATGGCGCTGATGGCCTTCATCCACATGTTCAGCACCTTCTTCATGAAGTCCTACCGCAAACCACGTGAACT
CATGTGGGTCAGCGGCTTCATCCTGCTTGCGCTGACACTCGGTTTCGGGTTCACCGGTTACCTGCTTCCCTGGAACGAGC
TTGCATTCTTCGCAACCCAGGTTGGTACCGAAGTTCCTAAAGTCATGCCCGGCGGCAACGTACTCGTCGAGATCCTTCGC
GGCGGCGAAGAGGTTTCAGCTGAAACCCTGACCCGTATGTTCGCCATGCACGTCGTGCTGCTTCCAGGCCTTGTCATGCT
TGTGCTTTCAGCACACCTCATGCTCGTCCAGGTCCTCGGCACCTCTGCCCCGATCGGCTACAAAGAAGCCGGCCTCATCA
AAGGCTACGAGAAGTTCTTCCCGACCTTCCTTGCAAAAGACGCCATCGGCTGGATGATCGGTTTCGGTCTTCTTATCTAT
CTGGCAGTCATGTTCCCCTGGGAGATCGGCGTCAAGGCAGATCCGCTTGCCGCAGCACCGCAGGGCATCAAGCCTGAATG
GTACTTCTGGGCACAGTTCCAGCTGCTCAAAGACTTCGCCTTCGACGGCGGCGAACTGCTCGCCATCATTCTCTTCACCA
TCGGTGCAATTGTCTGGATCCTCGTTCCGTTCATCGACAAAAAAGCATCACGCGAAGAAAGAAGCCCGATGTTCACTATC
TTCGGTATCCTCGTTCTTGCATTCATGCTCATCGAAACCTACCGCGTCTATCTCGAATACGGCTGGTAA

Upstream 100 bases:

>100_bases
TCCGTTGACACCCTTCAGTGTCAAAGTCGACGGTGACGATCTCGTCGTTTCAAAAGCTTAATATCTAAACACTACTTGAA
AATTAAGGGAGTCAGGAAAC

Downstream 100 bases:

>100_bases
GAGCAAGCGAGCAAACATCGCACACTACAAAAGCCCGGTTACAAAGCCGGGCTTTTTTTATTTGGTGAATGGTGAATTCG
TTATTCGTTACCAGTTGGCG

Product: Cytochrome b/b6 domain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 422; Mature: 421

Protein sequence:

>422_residues
MAEENNKNAMAGKAPAKPKPAAPGKPAPAKPAGASAKPKPAASVAGGSKSGVYKPEEVRAEANPFKHSKENVVGAWVQQR
FSVLNPIFAYLKKKEVPQHRLSFWYYFGGLTLFFFIIQIITGLLLLLYYRPTEAEAFARFVYIQTEVPYGWLIRQVHAWS
ANLMALMAFIHMFSTFFMKSYRKPRELMWVSGFILLALTLGFGFTGYLLPWNELAFFATQVGTEVPKVMPGGNVLVEILR
GGEEVSAETLTRMFAMHVVLLPGLVMLVLSAHLMLVQVLGTSAPIGYKEAGLIKGYEKFFPTFLAKDAIGWMIGFGLLIY
LAVMFPWEIGVKADPLAAAPQGIKPEWYFWAQFQLLKDFAFDGGELLAIILFTIGAIVWILVPFIDKKASREERSPMFTI
FGILVLAFMLIETYRVYLEYGW

Sequences:

>Translated_422_residues
MAEENNKNAMAGKAPAKPKPAAPGKPAPAKPAGASAKPKPAASVAGGSKSGVYKPEEVRAEANPFKHSKENVVGAWVQQR
FSVLNPIFAYLKKKEVPQHRLSFWYYFGGLTLFFFIIQIITGLLLLLYYRPTEAEAFARFVYIQTEVPYGWLIRQVHAWS
ANLMALMAFIHMFSTFFMKSYRKPRELMWVSGFILLALTLGFGFTGYLLPWNELAFFATQVGTEVPKVMPGGNVLVEILR
GGEEVSAETLTRMFAMHVVLLPGLVMLVLSAHLMLVQVLGTSAPIGYKEAGLIKGYEKFFPTFLAKDAIGWMIGFGLLIY
LAVMFPWEIGVKADPLAAAPQGIKPEWYFWAQFQLLKDFAFDGGELLAIILFTIGAIVWILVPFIDKKASREERSPMFTI
FGILVLAFMLIETYRVYLEYGW
>Mature_421_residues
AEENNKNAMAGKAPAKPKPAAPGKPAPAKPAGASAKPKPAASVAGGSKSGVYKPEEVRAEANPFKHSKENVVGAWVQQRF
SVLNPIFAYLKKKEVPQHRLSFWYYFGGLTLFFFIIQIITGLLLLLYYRPTEAEAFARFVYIQTEVPYGWLIRQVHAWSA
NLMALMAFIHMFSTFFMKSYRKPRELMWVSGFILLALTLGFGFTGYLLPWNELAFFATQVGTEVPKVMPGGNVLVEILRG
GEEVSAETLTRMFAMHVVLLPGLVMLVLSAHLMLVQVLGTSAPIGYKEAGLIKGYEKFFPTFLAKDAIGWMIGFGLLIYL
AVMFPWEIGVKADPLAAAPQGIKPEWYFWAQFQLLKDFAFDGGELLAIILFTIGAIVWILVPFIDKKASREERSPMFTIF
GILVLAFMLIETYRVYLEYGW

Specific function: Component of the green S-bacteria bc complex, which consists of the Rieske protein and cytochrome b subunit but appears to lack a cytochrome c1-equivalent. This complex has a comparatively low redox potential [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=283, Percent_Identity=31.4487632508834, Blast_Score=125, Evalue=7e-29,
Organism=Saccharomyces cerevisiae, GI6226529, Length=308, Percent_Identity=29.2207792207792, Blast_Score=113, Evalue=7e-26,
Organism=Saccharomyces cerevisiae, GI6226532, Length=194, Percent_Identity=31.4432989690722, Blast_Score=98, Evalue=2e-21,
Organism=Saccharomyces cerevisiae, GI6226531, Length=182, Percent_Identity=26.3736263736264, Blast_Score=71, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6226530, Length=122, Percent_Identity=29.5081967213115, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00032 Cytochrom_B_C; PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 47228; Mature: 47097

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS51002 CYTB_NTER ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEENNKNAMAGKAPAKPKPAAPGKPAPAKPAGASAKPKPAASVAGGSKSGVYKPEEVRA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHC
EANPFKHSKENVVGAWVQQRFSVLNPIFAYLKKKEVPQHRLSFWYYFGGLTLFFFIIQII
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
TGLLLLLYYRPTEAEAFARFVYIQTEVPYGWLIRQVHAWSANLMALMAFIHMFSTFFMKS
HHHHHHHHCCCCCHHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRKPRELMWVSGFILLALTLGFGFTGYLLPWNELAFFATQVGTEVPKVMPGGNVLVEILR
HCCHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
GGEEVSAETLTRMFAMHVVLLPGLVMLVLSAHLMLVQVLGTSAPIGYKEAGLIKGYEKFF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
PTFLAKDAIGWMIGFGLLIYLAVMFPWEIGVKADPLAAAPQGIKPEWYFWAQFQLLKDFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHC
FDGGELLAIILFTIGAIVWILVPFIDKKASREERSPMFTIFGILVLAFMLIETYRVYLEY
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
GW
CC
>Mature Secondary Structure 
AEENNKNAMAGKAPAKPKPAAPGKPAPAKPAGASAKPKPAASVAGGSKSGVYKPEEVRA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHC
EANPFKHSKENVVGAWVQQRFSVLNPIFAYLKKKEVPQHRLSFWYYFGGLTLFFFIIQII
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
TGLLLLLYYRPTEAEAFARFVYIQTEVPYGWLIRQVHAWSANLMALMAFIHMFSTFFMKS
HHHHHHHHCCCCCHHHHEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YRKPRELMWVSGFILLALTLGFGFTGYLLPWNELAFFATQVGTEVPKVMPGGNVLVEILR
HCCHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
GGEEVSAETLTRMFAMHVVLLPGLVMLVLSAHLMLVQVLGTSAPIGYKEAGLIKGYEKFF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
PTFLAKDAIGWMIGFGLLIYLAVMFPWEIGVKADPLAAAPQGIKPEWYFWAQFQLLKDFA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHC
FDGGELLAIILFTIGAIVWILVPFIDKKASREERSPMFTIFGILVLAFMLIETYRVYLEY
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
GW
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA