Click here to switch to the map view.

The map label for this gene is rsmI [H]

Identifier: 194333351

GI number: 194333351

Start: 550349

End: 551074

Strand: Reverse

Name: rsmI [H]

Synonym: Paes_0508

Alternate gene names: 194333351

Gene position: 551074-550349 (Counterclockwise)

Preceding gene: 194333355

Following gene: 194333350

Centisome position: 21.93

GC content: 53.72

Gene sequence:

>726_bases
ATGAAAGGAACCGGTACCCTCTACACCGTGGCGACCCCTCTCGGCAATCTCAATGACATGACCTACCGGGCGGTGAGCAC
GCTTCAGGAGGTCGATGCCATAGCATGCGAAGACACTCGAAGGGCTTCTATCCTGCTGAAGCACTTCAATATCGAACACA
AAAAACTTGTCAGCTATCACAGCGCTAACGAACAGCGGGCTGTCGGCACAATTCTGGCGCTGCTCGAAGAGGGCAATGAT
ATCGCCCTTGTTACCGATGCGGGAACACCGGCCATCAGCGATCCGGGCTACAGCCTTGTTCGCGAAGCATTCAGCCGCGA
GATCAGCGTTCTGCCGGTTCCCGGCGCAAGCGCCCTGACTGCCGCCCTTTCTGCGTGTCCGCTCCCTTCGCACAATTTTT
TCTTTGCCGGGTTTCTGCCTCATAAAAAAGGCAGGAAAAGCCGCCTTGAGTTTCTCGCATCGCTGCAGTCAACTGTCGTC
TTCTACGAATCTCCCTACCGGATCATCAAACTGCTCGACGAGCTGGAACGTGTCATGCCCGGAGCAGAGATATTCATCGC
AAGGGAGATCACCAAACTGCACGAAGAGTATATAACAGGAAGCGCAGAAGAGCTCGCCCGTCATTTCTCGGAGAAAAAAA
TCCGCGGCGAATTTGTCGTGGTGGTCTACCCTGCCTCACTGAACCATCAATCACACAGAAACAACGAAGATGCAGATCAT
CACTAA

Upstream 100 bases:

>100_bases
AATTATTGCTTAGTATATTGTATATACTAAAAATAGAGCATCATTGCACGCAACAATCAGGCAGCCGCAAAAGGCCGCCT
GAGGCGCAAAAATCAAAAGG

Downstream 100 bases:

>100_bases
TCCCCGCGAGATGCAGAATATCGCGGAAAATCTGAGAATGAAGCATCAGCTGATCGCTGTCGTCATGACCATGGGCGCAT
TGCATGAAGGCCATCTCAGC

Product: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MKGTGTLYTVATPLGNLNDMTYRAVSTLQEVDAIACEDTRRASILLKHFNIEHKKLVSYHSANEQRAVGTILALLEEGND
IALVTDAGTPAISDPGYSLVREAFSREISVLPVPGASALTAALSACPLPSHNFFFAGFLPHKKGRKSRLEFLASLQSTVV
FYESPYRIIKLLDELERVMPGAEIFIAREITKLHEEYITGSAEELARHFSEKKIRGEFVVVVYPASLNHQSHRNNEDADH
H

Sequences:

>Translated_241_residues
MKGTGTLYTVATPLGNLNDMTYRAVSTLQEVDAIACEDTRRASILLKHFNIEHKKLVSYHSANEQRAVGTILALLEEGND
IALVTDAGTPAISDPGYSLVREAFSREISVLPVPGASALTAALSACPLPSHNFFFAGFLPHKKGRKSRLEFLASLQSTVV
FYESPYRIIKLLDELERVMPGAEIFIAREITKLHEEYITGSAEELARHFSEKKIRGEFVVVVYPASLNHQSHRNNEDADH
H
>Mature_241_residues
MKGTGTLYTVATPLGNLNDMTYRAVSTLQEVDAIACEDTRRASILLKHFNIEHKKLVSYHSANEQRAVGTILALLEEGND
IALVTDAGTPAISDPGYSLVREAFSREISVLPVPGASALTAALSACPLPSHNFFFAGFLPHKKGRKSRLEFLASLQSTVV
FYESPYRIIKLLDELERVMPGAEIFIAREITKLHEEYITGSAEELARHFSEKKIRGEFVVVVYPASLNHQSHRNNEDADH
H

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=222, Percent_Identity=45.4954954954955, Blast_Score=177, Evalue=6e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 26704; Mature: 26704

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGTGTLYTVATPLGNLNDMTYRAVSTLQEVDAIACEDTRRASILLKHFNIEHKKLVSYH
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHH
SANEQRAVGTILALLEEGNDIALVTDAGTPAISDPGYSLVREAFSREISVLPVPGASALT
CCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEECCCHHHHH
AALSACPLPSHNFFFAGFLPHKKGRKSRLEFLASLQSTVVFYESPYRIIKLLDELERVMP
HHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCC
GAEIFIAREITKLHEEYITGSAEELARHFSEKKIRGEFVVVVYPASLNHQSHRNNEDADH
CCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCC
H
C
>Mature Secondary Structure
MKGTGTLYTVATPLGNLNDMTYRAVSTLQEVDAIACEDTRRASILLKHFNIEHKKLVSYH
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHH
SANEQRAVGTILALLEEGNDIALVTDAGTPAISDPGYSLVREAFSREISVLPVPGASALT
CCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEECCCHHHHH
AALSACPLPSHNFFFAGFLPHKKGRKSRLEFLASLQSTVVFYESPYRIIKLLDELERVMP
HHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCC
GAEIFIAREITKLHEEYITGSAEELARHFSEKKIRGEFVVVVYPASLNHQSHRNNEDADH
CCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCC
H
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]