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The map label for this gene is elbB [H]

Identifier: 194333324

GI number: 194333324

Start: 519990

End: 520646

Strand: Reverse

Name: elbB [H]

Synonym: Paes_0481

Alternate gene names: 194333324

Gene position: 520646-519990 (Counterclockwise)

Preceding gene: 194333326

Following gene: 194333322

Centisome position: 20.72

GC content: 55.86

Gene sequence:

>657_bases
ATGAAAAAAATAGGCGTTCTTCTCTCCGGCTGCGGAGTCATGGACGGAACGGAAATCCATGAAGCCGTGCTGACACTTCT
GGCTATTGATGTCGCAGGTGCAGAAGCAGTCTGCATCGCCCCCGATATCGAACAGCACCACGTCATCAACCATCTCACAG
GAGAGGAAGTGAAGAACGAAACGCGCAACGTGCTCGCCGAGTCGGCCAGGATCGCCAGAGGAAACATCAAGCCGCTTCAG
GAAATCGACTCGCTCGGGCTCGACGCACTGATCCTGCCGGGAGGCTTCGGCGCAGCGAAAAACCTCTCCGACTACGCTTT
TAAAGGTGAGCATTTCGATGTGCTGCCTGAAGTCGCAGATGCCATCCGTTCATTCTACAGGGCAGGCAAACCGCTGGGAT
TCATCTGCATCTCACCAGTCATCGCAGCAAAAGTGCTTGCCGAAGAGGGCGTCGAGGTCACGATCGGAAACGACCATACT
GCTTCCGCCAATATCGAAGCCATGGGAGCCAGACATGTCAACGCGGAGGTCTTCAATATCCACGCGAGTCTCGGCGGCAA
GGTGATAAGCACCCCTGCCTACATGCTCGGCCCCTCGATCAAGGACGTGGCCAAAGGTATCGACAAGCTGGTCAACGCCG
TGGTAAGGCTTGCATGA

Upstream 100 bases:

>100_bases
ATGATATTTTTTTTAACTATGAAGAAAGAGATTGTTGCTCCGGCTTCGACAGTCCGGGGAGCAGAAATCTGTCACCACAA
GATACCTAAAGGAAAAGATG

Downstream 100 bases:

>100_bases
GCGACAATGAATAGATGAGACCATAAGACGGTCAAGCACAGGGGGCATCACCCTACTTCTCGTAAGGCACCCCGACCTCT
TTCGGGGCACGGGCCTTGCC

Product: isoprenoid biosynthesis protein with amidotransferase-like domain

Products: NA

Alternate protein names: Sigma cross-reacting protein 27A; SCRP-27A [H]

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MKKIGVLLSGCGVMDGTEIHEAVLTLLAIDVAGAEAVCIAPDIEQHHVINHLTGEEVKNETRNVLAESARIARGNIKPLQ
EIDSLGLDALILPGGFGAAKNLSDYAFKGEHFDVLPEVADAIRSFYRAGKPLGFICISPVIAAKVLAEEGVEVTIGNDHT
ASANIEAMGARHVNAEVFNIHASLGGKVISTPAYMLGPSIKDVAKGIDKLVNAVVRLA

Sequences:

>Translated_218_residues
MKKIGVLLSGCGVMDGTEIHEAVLTLLAIDVAGAEAVCIAPDIEQHHVINHLTGEEVKNETRNVLAESARIARGNIKPLQ
EIDSLGLDALILPGGFGAAKNLSDYAFKGEHFDVLPEVADAIRSFYRAGKPLGFICISPVIAAKVLAEEGVEVTIGNDHT
ASANIEAMGARHVNAEVFNIHASLGGKVISTPAYMLGPSIKDVAKGIDKLVNAVVRLA
>Mature_218_residues
MKKIGVLLSGCGVMDGTEIHEAVLTLLAIDVAGAEAVCIAPDIEQHHVINHLTGEEVKNETRNVLAESARIARGNIKPLQ
EIDSLGLDALILPGGFGAAKNLSDYAFKGEHFDVLPEVADAIRSFYRAGKPLGFICISPVIAAKVLAEEGVEVTIGNDHT
ASANIEAMGARHVNAEVFNIHASLGGKVISTPAYMLGPSIKDVAKGIDKLVNAVVRLA

Specific function: May be involved in the early steps of isoprenoid biosynthesis [H]

COG id: COG3155

COG function: function code Q; Uncharacterized protein involved in an early stage of isoprenoid biosynthesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ES1 family [H]

Homologues:

Organism=Homo sapiens, GI296531406, Length=225, Percent_Identity=46.2222222222222, Blast_Score=189, Evalue=2e-48,
Organism=Homo sapiens, GI296531408, Length=225, Percent_Identity=40.8888888888889, Blast_Score=149, Evalue=2e-36,
Organism=Escherichia coli, GI87082228, Length=218, Percent_Identity=55.045871559633, Blast_Score=224, Evalue=3e-60,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI [H]

EC number: NA

Molecular weight: Translated: 22906; Mature: 22906

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIGVLLSGCGVMDGTEIHEAVLTLLAIDVAGAEAVCIAPDIEQHHVINHLTGEEVKNE
CCCHHEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCHHHHHHH
TRNVLAESARIARGNIKPLQEIDSLGLDALILPGGFGAAKNLSDYAFKGEHFDVLPEVAD
HHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCHHHCCCCCCHHHHHHHH
AIRSFYRAGKPLGFICISPVIAAKVLAEEGVEVTIGNDHTASANIEAMGARHVNAEVFNI
HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEECCCCCCCCEEEEE
HASLGGKVISTPAYMLGPSIKDVAKGIDKLVNAVVRLA
EHHHCCEEECCCHHHHCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKIGVLLSGCGVMDGTEIHEAVLTLLAIDVAGAEAVCIAPDIEQHHVINHLTGEEVKNE
CCCHHEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCHHHHHHH
TRNVLAESARIARGNIKPLQEIDSLGLDALILPGGFGAAKNLSDYAFKGEHFDVLPEVAD
HHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEECCCCCCCCCCCHHHCCCCCCHHHHHHHH
AIRSFYRAGKPLGFICISPVIAAKVLAEEGVEVTIGNDHTASANIEAMGARHVNAEVFNI
HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEECCCCCCCCEEEEE
HASLGGKVISTPAYMLGPSIKDVAKGIDKLVNAVVRLA
EHHHCCEEECCCHHHHCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 1575737; 9603997 [H]