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The map label for this gene is panD

Identifier: 194333223

GI number: 194333223

Start: 411785

End: 412174

Strand: Reverse

Name: panD

Synonym: Paes_0379

Alternate gene names: 194333223

Gene position: 412174-411785 (Counterclockwise)

Preceding gene: 194333224

Following gene: 194333222

Centisome position: 16.4

GC content: 46.92

Gene sequence:

>390_bases
ATGAGACTGCATTTGCTTAAGTCGAAAATTCACAATGCTATCGTTACCAGCGGAGATCTTGAATACGAAGGAAGTATAAC
GATTGATTCCCAGTTGCTTGAACTGGCTGACATGCTTCCCAATGAGAAAGTGCTTTGCGTCAATAACAACAATGGCGAAC
GGTTTGAAACCTATATTATCAAAGGAAAAGCCGGCTCACGCGAAATTCAGCTCAATGGCGCTGCCGCGCGTTGCGCACTT
CCGGGCGATGAGATTATCATCATGACATTTGCAGAAATCGAAGCCGAAAAAGCAAAGGATTTCAAACCGATGATCCTGAT
TGTCGATCACCAGAACAATCCCAAACGCCGTCATCTGGTAGGCGAGGAAGACACCCCCCTGCCGCACTGA

Upstream 100 bases:

>100_bases
TCGAGGCTATGGTCTTGAAAGTGATGATGCTCTGAAAAATTATACTATCTTCAAAGCCAGCGGAGAAGCTGAGCTTAAAC
CATAAAGGATTGTTTTGTTC

Downstream 100 bases:

>100_bases
CAATACAATAGTTCGTTGAGGCGGCCCGCTGCCTCAACAGTTCAACAACTCAACAATCTCCCCCCTATGTCTCTCTCAAT
AATCGTCATGGCTGCGGGTA

Product: aspartate alpha-decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MRLHLLKSKIHNAIVTSGDLEYEGSITIDSQLLELADMLPNEKVLCVNNNNGERFETYIIKGKAGSREIQLNGAAARCAL
PGDEIIIMTFAEIEAEKAKDFKPMILIVDHQNNPKRRHLVGEEDTPLPH

Sequences:

>Translated_129_residues
MRLHLLKSKIHNAIVTSGDLEYEGSITIDSQLLELADMLPNEKVLCVNNNNGERFETYIIKGKAGSREIQLNGAAARCAL
PGDEIIIMTFAEIEAEKAKDFKPMILIVDHQNNPKRRHLVGEEDTPLPH
>Mature_129_residues
MRLHLLKSKIHNAIVTSGDLEYEGSITIDSQLLELADMLPNEKVLCVNNNNGERFETYIIKGKAGSREIQLNGAAARCAL
PGDEIIIMTFAEIEAEKAKDFKPMILIVDHQNNPKRRHLVGEEDTPLPH

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family

Homologues:

Organism=Escherichia coli, GI1786323, Length=112, Percent_Identity=42.8571428571429, Blast_Score=96, Evalue=6e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PAND_PROA2 (B4S4T8)

Other databases:

- EMBL:   CP001108
- RefSeq:   YP_002015083.1
- ProteinModelPortal:   B4S4T8
- SMR:   B4S4T8
- GeneID:   6459282
- GenomeReviews:   CP001108_GR
- KEGG:   paa:Paes_0379
- HOGENOM:   HBG302821
- OMA:   LYSKIHR
- ProtClustDB:   PRK05449
- GO:   GO:0005737
- GO:   GO:0005488
- HAMAP:   MF_00446
- InterPro:   IPR009010
- InterPro:   IPR003190
- Gene3D:   G3DSA:2.40.40.20
- PANTHER:   PTHR21012
- PIRSF:   PIRSF006246
- ProDom:   PD009294
- TIGRFAMs:   TIGR00223

Pfam domain/function: PF02261 Asp_decarbox; SSF50692 Asp_decarb_fold

EC number: =4.1.1.11

Molecular weight: Translated: 14431; Mature: 14431

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: ACT_SITE 25-25 ACT_SITE 58-58 BINDING 57-57

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLHLLKSKIHNAIVTSGDLEYEGSITIDSQLLELADMLPNEKVLCVNNNNGERFETYII
CEEEHHHHHHHHEEEECCCCEECCEEEEHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEE
KGKAGSREIQLNGAAARCALPGDEIIIMTFAEIEAEKAKDFKPMILIVDHQNNPKRRHLV
ECCCCCEEEEECCCEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCHHCCCC
GEEDTPLPH
CCCCCCCCC
>Mature Secondary Structure
MRLHLLKSKIHNAIVTSGDLEYEGSITIDSQLLELADMLPNEKVLCVNNNNGERFETYII
CEEEHHHHHHHHEEEECCCCEECCEEEEHHHHHHHHHHCCCCEEEEEECCCCCEEEEEEE
KGKAGSREIQLNGAAARCALPGDEIIIMTFAEIEAEKAKDFKPMILIVDHQNNPKRRHLV
ECCCCCEEEEECCCEEEEECCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCHHCCCC
GEEDTPLPH
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA