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The map label for this gene is lpsE [H]

Identifier: 194333202

GI number: 194333202

Start: 393748

End: 394842

Strand: Reverse

Name: lpsE [H]

Synonym: Paes_0358

Alternate gene names: 194333202

Gene position: 394842-393748 (Counterclockwise)

Preceding gene: 194333222

Following gene: 194333200

Centisome position: 15.71

GC content: 49.77

Gene sequence:

>1095_bases
ATGAATATAGCGTTTATCAATTCAGCAAGAACCTGGGGAGGAACCGAAAAATGGACGTTGATGGCTTCCGAAGCCCTCAG
TGAGACCTGCGATGTCGTTCTCATCTACAGAAAAGCTCTGGTTGGCGACAGGTTTTCCGTTACCAGATACCCTCTCCCGC
TCATCAGCCATCTCGATCTTTTCAGTCTTGCCCGAATTGTTGAGATCATCAAAAAAGAGCAGATCGACATCATTATACCA
ACCAAAAGAAAAGACTACGTCCTTGCCGGTATGGCAGCAGGAATCTGCGGTATTTCATCGGTTATCAGGCTTGGAATCGA
CCGGAAACTCAAAATCCCAATTATCCACAAACTGATCTACCGGGACCTGACTGACGGTATTATCGTCAATGCCGAAAGGA
CCAAACAAACCCTTCTCGAATCCCGTTTCATGCAGGGACAAAAAATACAGGTCATCTATAACGGTCTTGACACAAAAAAA
ATAGACGCAGAGCACTCCCATCTTCCGCCCAGACCATCCGGATTGGTGGTGACCGCGATGGGAATCCTGACGTTTCGCAA
GGGATTCGACTTCCTTATCAGAGGGTTTGCCCGCTTCCTCGTCCAATCGCCGCAAATCGATGCGACACTGGTCATCATCG
GCAGCGGGCCGCAGCATGAGACGTTCAGGGCTCTTGCTCAAGAACTGCTCATTGCCGACAGGGTCATCTTTACCGGTTTT
CTTGAAAACCCTCTGCCGTGGCTCAAACAAAGCGATATCTTTGCCATGACATCAACCAACGAAGGCATTTCCAATGCCCT
GCTTGAAGCGATGTACCTCAACAACGCGCCGATCTGCACCAGGGCAGGAGGCACCGAAGAAATCATTACAGACAGAGAAA
ACGGCCTTCTCATCCCCTACGGTGATGAACAAAAACTTGCGAGTGCGATAGAGGAACTCGCCTTCAGCACAACCATCAGG
GAACGGCTGTCGGCAAACGCTCACCGAAGCGTCGTGAATCAGTTTTCATCAGAAAGGATGAAAAAAGAGCTTGAAGCCTT
TTTGCATCGGGTCATCGACGCCTCCGCCAGTGATCACTCGCCGAGCTCATCATGA

Upstream 100 bases:

>100_bases
TATATTCCGGGGCTGTCTTGATATTATTGCTGGCCATATGTCGCGGAGCTCTTCCTGTTGCGTTGGTTTTGCATAGCAAT
CAAATCGTTCATTGAGTCCT

Downstream 100 bases:

>100_bases
AGCATCGAGGCAACAGCTTCAGCAGCACGGTTGGCAGGATAGTGCTCCGGAAGCGAATGTCGGAACTTGCCCCATTTTCT
CCGAACGGTTCTGCGAGCAA

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MNIAFINSARTWGGTEKWTLMASEALSETCDVVLIYRKALVGDRFSVTRYPLPLISHLDLFSLARIVEIIKKEQIDIIIP
TKRKDYVLAGMAAGICGISSVIRLGIDRKLKIPIIHKLIYRDLTDGIIVNAERTKQTLLESRFMQGQKIQVIYNGLDTKK
IDAEHSHLPPRPSGLVVTAMGILTFRKGFDFLIRGFARFLVQSPQIDATLVIIGSGPQHETFRALAQELLIADRVIFTGF
LENPLPWLKQSDIFAMTSTNEGISNALLEAMYLNNAPICTRAGGTEEIITDRENGLLIPYGDEQKLASAIEELAFSTTIR
ERLSANAHRSVVNQFSSERMKKELEAFLHRVIDASASDHSPSSS

Sequences:

>Translated_364_residues
MNIAFINSARTWGGTEKWTLMASEALSETCDVVLIYRKALVGDRFSVTRYPLPLISHLDLFSLARIVEIIKKEQIDIIIP
TKRKDYVLAGMAAGICGISSVIRLGIDRKLKIPIIHKLIYRDLTDGIIVNAERTKQTLLESRFMQGQKIQVIYNGLDTKK
IDAEHSHLPPRPSGLVVTAMGILTFRKGFDFLIRGFARFLVQSPQIDATLVIIGSGPQHETFRALAQELLIADRVIFTGF
LENPLPWLKQSDIFAMTSTNEGISNALLEAMYLNNAPICTRAGGTEEIITDRENGLLIPYGDEQKLASAIEELAFSTTIR
ERLSANAHRSVVNQFSSERMKKELEAFLHRVIDASASDHSPSSS
>Mature_364_residues
MNIAFINSARTWGGTEKWTLMASEALSETCDVVLIYRKALVGDRFSVTRYPLPLISHLDLFSLARIVEIIKKEQIDIIIP
TKRKDYVLAGMAAGICGISSVIRLGIDRKLKIPIIHKLIYRDLTDGIIVNAERTKQTLLESRFMQGQKIQVIYNGLDTKK
IDAEHSHLPPRPSGLVVTAMGILTFRKGFDFLIRGFARFLVQSPQIDATLVIIGSGPQHETFRALAQELLIADRVIFTGF
LENPLPWLKQSDIFAMTSTNEGISNALLEAMYLNNAPICTRAGGTEEIITDRENGLLIPYGDEQKLASAIEELAFSTTIR
ERLSANAHRSVVNQFSSERMKKELEAFLHRVIDASASDHSPSSS

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 40569; Mature: 40569

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIAFINSARTWGGTEKWTLMASEALSETCDVVLIYRKALVGDRFSVTRYPLPLISHLDL
CCEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHH
FSLARIVEIIKKEQIDIIIPTKRKDYVLAGMAAGICGISSVIRLGIDRKLKIPIIHKLIY
HHHHHHHHHHHHCCCCEEECCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
RDLTDGIIVNAERTKQTLLESRFMQGQKIQVIYNGLDTKKIDAEHSHLPPRPSGLVVTAM
HHCCCCEEEECHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEHHH
GILTFRKGFDFLIRGFARFLVQSPQIDATLVIIGSGPQHETFRALAQELLIADRVIFTGF
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
LENPLPWLKQSDIFAMTSTNEGISNALLEAMYLNNAPICTRAGGTEEIITDRENGLLIPY
HCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEECCCCCHHHHCCCCCCEEEEC
GDEQKLASAIEELAFSTTIRERLSANAHRSVVNQFSSERMKKELEAFLHRVIDASASDHS
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PSSS
CCCC
>Mature Secondary Structure
MNIAFINSARTWGGTEKWTLMASEALSETCDVVLIYRKALVGDRFSVTRYPLPLISHLDL
CCEEEEECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHH
FSLARIVEIIKKEQIDIIIPTKRKDYVLAGMAAGICGISSVIRLGIDRKLKIPIIHKLIY
HHHHHHHHHHHHCCCCEEECCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
RDLTDGIIVNAERTKQTLLESRFMQGQKIQVIYNGLDTKKIDAEHSHLPPRPSGLVVTAM
HHCCCCEEEECHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEHHH
GILTFRKGFDFLIRGFARFLVQSPQIDATLVIIGSGPQHETFRALAQELLIADRVIFTGF
HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
LENPLPWLKQSDIFAMTSTNEGISNALLEAMYLNNAPICTRAGGTEEIITDRENGLLIPY
HCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEECCCCCHHHHCCCCCCEEEEC
GDEQKLASAIEELAFSTTIRERLSANAHRSVVNQFSSERMKKELEAFLHRVIDASASDHS
CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PSSS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]