Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
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Accession | NC_011059 |
Length | 2,512,923 |
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The map label for this gene is 194333178
Identifier: 194333178
GI number: 194333178
Start: 362699
End: 363325
Strand: Reverse
Name: 194333178
Synonym: Paes_0334
Alternate gene names: NA
Gene position: 363325-362699 (Counterclockwise)
Preceding gene: 194333181
Following gene: 194333176
Centisome position: 14.46
GC content: 51.83
Gene sequence:
>627_bases ATGCTGCAGTTTTTCGGCAACACCTCCATCCGCCAGGGATCCTATATCCTTGTCATTTGCCTCTCCAAACCGCAACACAT TGCCTTCGGCAGGTTTCAGAAAGGAAAACCTGTTCTGATGCAAGCGGGAGCCTACCTCTACACCGGTTCTGCAATGGGAA ACCGGAAAGGCACCGACCCTCTGGCCCGAAGATTGTTGCGACACGCAACCAGAAGCGGGAAAAAACCACCCCATCGCATC AGAAAAAGCATGATCGGTCTCTTCAAGCAGGAACATCCCGAAAGAGAACTGCTGAGTCCTCCCAGGGAAAAAAAACTCAA ATGGCACATCGACTTCCTGCTCGATAACCGATATAGCCGTATAACCCACATTTTCGTCATCCACTCCTGCCGTCGACTGG AATCCCGGATATCGCAGCATATAGCATCGCTAAACAGTATATCAATCCCGGCCAAACGACTCGGAGCCTCTGACATGCGC CATGAAACCCATCTGGTCTTCATGAACTCACCCGACGAGTGCATGGCAGCCATCGAGAAGCATCTGCTCTGGCTTGCCGA ACAGGATAATCCGGATCAGGCCTTACCCATCAGGGCACCGACAAACTTCGAACGGTCGAAAATCTGA
Upstream 100 bases:
>100_bases TTCCTGCACAGGTGAATTTCGTGAAGAATCTTTTTTGCTCGCCATTCCCCTAACAACTACATTCGATTATAACGGTCGTC ATCAACACTCAACAGAGCGT
Downstream 100 bases:
>100_bases AGATCGTCAATCTTTTCACCCACACCGATATACTTGACCGGAAGATGAAGATCTCTCGATATCGACAACACAATGCCGCC TTTTGCCGTGCCGTCAAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MLQFFGNTSIRQGSYILVICLSKPQHIAFGRFQKGKPVLMQAGAYLYTGSAMGNRKGTDPLARRLLRHATRSGKKPPHRI RKSMIGLFKQEHPERELLSPPREKKLKWHIDFLLDNRYSRITHIFVIHSCRRLESRISQHIASLNSISIPAKRLGASDMR HETHLVFMNSPDECMAAIEKHLLWLAEQDNPDQALPIRAPTNFERSKI
Sequences:
>Translated_208_residues MLQFFGNTSIRQGSYILVICLSKPQHIAFGRFQKGKPVLMQAGAYLYTGSAMGNRKGTDPLARRLLRHATRSGKKPPHRI RKSMIGLFKQEHPERELLSPPREKKLKWHIDFLLDNRYSRITHIFVIHSCRRLESRISQHIASLNSISIPAKRLGASDMR HETHLVFMNSPDECMAAIEKHLLWLAEQDNPDQALPIRAPTNFERSKI >Mature_208_residues MLQFFGNTSIRQGSYILVICLSKPQHIAFGRFQKGKPVLMQAGAYLYTGSAMGNRKGTDPLARRLLRHATRSGKKPPHRI RKSMIGLFKQEHPERELLSPPREKKLKWHIDFLLDNRYSRITHIFVIHSCRRLESRISQHIASLNSISIPAKRLGASDMR HETHLVFMNSPDECMAAIEKHLLWLAEQDNPDQALPIRAPTNFERSKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23954; Mature: 23954
Theoretical pI: Translated: 11.03; Mature: 11.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQFFGNTSIRQGSYILVICLSKPQHIAFGRFQKGKPVLMQAGAYLYTGSAMGNRKGTDP CCEECCCCCCCCCCEEEEEEECCCCEEECCCCCCCCCEEEECCCEEEECCCCCCCCCCCH LARRLLRHATRSGKKPPHRIRKSMIGLFKQEHPERELLSPPREKKLKWHIDFLLDNRYSR HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEEEEEECCCHHH ITHIFVIHSCRRLESRISQHIASLNSISIPAKRLGASDMRHETHLVFMNSPDECMAAIEK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHCCCCEEEEEECCCHHHHHHHHH HLLWLAEQDNPDQALPIRAPTNFERSKI HHEEEECCCCCCCEEEECCCCCCCCCCC >Mature Secondary Structure MLQFFGNTSIRQGSYILVICLSKPQHIAFGRFQKGKPVLMQAGAYLYTGSAMGNRKGTDP CCEECCCCCCCCCCEEEEEEECCCCEEECCCCCCCCCEEEECCCEEEECCCCCCCCCCCH LARRLLRHATRSGKKPPHRIRKSMIGLFKQEHPERELLSPPREKKLKWHIDFLLDNRYSR HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEEEEEECCCHHH ITHIFVIHSCRRLESRISQHIASLNSISIPAKRLGASDMRHETHLVFMNSPDECMAAIEK HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCHHCCCCEEEEEECCCHHHHHHHHH HLLWLAEQDNPDQALPIRAPTNFERSKI HHEEEECCCCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA