Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
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Accession | NC_011059 |
Length | 2,512,923 |
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The map label for this gene is fusA [H]
Identifier: 194333121
GI number: 194333121
Start: 290808
End: 292880
Strand: Reverse
Name: fusA [H]
Synonym: Paes_0277
Alternate gene names: 194333121
Gene position: 292880-290808 (Counterclockwise)
Preceding gene: 194333134
Following gene: 194333117
Centisome position: 11.65
GC content: 49.16
Gene sequence:
>2073_bases ATGCAAGCCGTTCAACCTGATCAACTTCGCAACATCGTCATTACCGGCCATTCAGGTTCAGGTAAAACAATGCTCGCCGA ATCATTTGCGTTGTCAATGAAGGTCATCAACCGTCTGGGCAGTATTGAGGATGGTTCGACATTATCAGATTACGCGGAAG ATGAAATTGCGCGACAACACAGTCTGAACACAAGCTTGATCAACGGCGAGTGGAACGGCAACAAAATCAACATCATCGAC GTACCCGGCCTGCTTGACTTTCACGGTGATGTCAAGTCTGCAATGCGCGTGGCAGATACCATCCTCATTACGGTCAACTC GGCAACAGGACTTGAAGTCGGAACAGACATGGTATGGGAGTATACACGCGAATACTATAAGCCGACAATATTTGTGCTCA CCAAACTCGATGCAGACAGAACAGACTTCGAGCAGACTATAGAGGATCTGAAAAAACAGTACGGTCATCTTGTTACCCCT ATACAATTTCCGGCTGAAGAAGGTCTCGGTCATCATATCATCATCGACGTCCTCCTGATGAAACAGCTTGAATTCAGTCC TGACAAACCCGGGACCATGACGATCAGTGAGATTCCTGACCTTTACCGCAAAAAAGCTGAAGAGCTTCATCACAACCTTG TCGAAGCGGTCGCAGAAACCGATGAGGAACTGATGAACAAGTATTTTGAAATTGGAACCCTCAGCGAAGATGAATTGCGT GCCGGCATAAAGTCGTCCCTCCTGACAAGAACCTTTTTCCCTGTTTTCTGTACCTCCCCGCTCCACCTTATAGGATCCGA ACGTCTGCTCAACGCCATTGTCAACATTTGCCCGTCCCCTATCGAACGCGGCCCTGAACATGCATACTGCAGCACTGAAA ACCATGATACGCTGATCGAACCCGATCCGGAAGGCAGAACGATAGCATTTATATTCAAAACGCTTTCAGAACCGCGCCTT GGCGAAATCTCCTATCTCAGAGTCTACTCGGGCCATATTGAAACAGGACATGAGCTTATTGACGCACAGACAGGACAGCT TGAGAAAATCGGCCAGGTCTATACCATGGCCGGTGAGAAAAAAATTCCTGTAGACAAGCTGGTTGCCGGAGACATCGGCA TGGTTGTCAAGCTGAAGGATGCCCACACGAATGACACCCTGGCAGACAAAGGCACGGACTGCCGGATCAGTCCGATCATC TTTCCTGAACCGGTCTATGCAACCGCAATCGCACCAGTAGCTCAGGGGGATGAGGAAAAAATTTCCAGCGGTCTGCATCA TCTTCATGAGGAAGACCCGAGCTTCAGTATCGAGCATGAACCGGAGTTCAATCAGACGATCCTGAAAACTCTCGGCGAAA CTCATCTGGACATTATCATCAACAGGCTCGAAAAAAAGTTTAACGTATCCGTGCAACGGCTTCCGGTAAAAATATCCTAC AGGGAAACCATAAGGGTCAGCGCAAATGCACAGGGAAAATACAAAAAACAATCAGGGGGCCGTGGACAGTATGGCGACGT ATGGATCCGAATTGATCCGGCAGAGCGTGAGACAGGATTTGCGTTTGCAAGTGAAGTTGTCGGCGGAGTCGTCCCGACCC GATACCTCCCTGCTGTAGAAAAGGGCCTTCGCGAAACAGCGTCTGAAGGAATACTCTGCGGATTCCCGATTGTCGATATC AAAGCAGTCGTCTACGATGGCTCCTATCACCCGGTTGACAGCTCTGAATTCGCCTTCAAGATCGCATCAAGCATGGCATT TAAATCAGCGTTCGACAAAGCCAAGCCGATGCTGCTCGAGCCCTACTGCACGCTTCGCGTTCTTGCTCCTGAACAGTATA CCGGTGAAATCGTCGGAGAAATATCGGTGAAGCGCGGTAAAATTGTCGGGATGGACGCCGATGGGAGATTTCAGACAATC AATGCGCTGATTCCCCAGGCATCACTGCACGATTTCCATACCCGTCTGGTAAGACTGACACAAAGCAGAGCTCGCTACAG TTATGCATTCAGCCACTACGAGGAAGTGCCGCAGGAAATAATGCAGCAGCTCATGAAGGAATACGAAAAATAA
Upstream 100 bases:
>100_bases TACTATTCTGCTGTTTCACACAGACACGTCAAACAGCTCTAAGCCATTGTCTGGAAAGGCCCTCCGGGCCATCAGCAATC AAAATAAAGGAGTACAAACC
Downstream 100 bases:
>100_bases TCAGCGTGAATCTGAGTGTGCAACTCCCTGCCTGTAGCCTGCAGAGAATGTTCTGAAAACATTCCTGCAGGCTACAGGAG TCGCAGGATGGATTTCGCCT
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 690; Mature: 690
Protein sequence:
>690_residues MQAVQPDQLRNIVITGHSGSGKTMLAESFALSMKVINRLGSIEDGSTLSDYAEDEIARQHSLNTSLINGEWNGNKINIID VPGLLDFHGDVKSAMRVADTILITVNSATGLEVGTDMVWEYTREYYKPTIFVLTKLDADRTDFEQTIEDLKKQYGHLVTP IQFPAEEGLGHHIIIDVLLMKQLEFSPDKPGTMTISEIPDLYRKKAEELHHNLVEAVAETDEELMNKYFEIGTLSEDELR AGIKSSLLTRTFFPVFCTSPLHLIGSERLLNAIVNICPSPIERGPEHAYCSTENHDTLIEPDPEGRTIAFIFKTLSEPRL GEISYLRVYSGHIETGHELIDAQTGQLEKIGQVYTMAGEKKIPVDKLVAGDIGMVVKLKDAHTNDTLADKGTDCRISPII FPEPVYATAIAPVAQGDEEKISSGLHHLHEEDPSFSIEHEPEFNQTILKTLGETHLDIIINRLEKKFNVSVQRLPVKISY RETIRVSANAQGKYKKQSGGRGQYGDVWIRIDPAERETGFAFASEVVGGVVPTRYLPAVEKGLRETASEGILCGFPIVDI KAVVYDGSYHPVDSSEFAFKIASSMAFKSAFDKAKPMLLEPYCTLRVLAPEQYTGEIVGEISVKRGKIVGMDADGRFQTI NALIPQASLHDFHTRLVRLTQSRARYSYAFSHYEEVPQEIMQQLMKEYEK
Sequences:
>Translated_690_residues MQAVQPDQLRNIVITGHSGSGKTMLAESFALSMKVINRLGSIEDGSTLSDYAEDEIARQHSLNTSLINGEWNGNKINIID VPGLLDFHGDVKSAMRVADTILITVNSATGLEVGTDMVWEYTREYYKPTIFVLTKLDADRTDFEQTIEDLKKQYGHLVTP IQFPAEEGLGHHIIIDVLLMKQLEFSPDKPGTMTISEIPDLYRKKAEELHHNLVEAVAETDEELMNKYFEIGTLSEDELR AGIKSSLLTRTFFPVFCTSPLHLIGSERLLNAIVNICPSPIERGPEHAYCSTENHDTLIEPDPEGRTIAFIFKTLSEPRL GEISYLRVYSGHIETGHELIDAQTGQLEKIGQVYTMAGEKKIPVDKLVAGDIGMVVKLKDAHTNDTLADKGTDCRISPII FPEPVYATAIAPVAQGDEEKISSGLHHLHEEDPSFSIEHEPEFNQTILKTLGETHLDIIINRLEKKFNVSVQRLPVKISY RETIRVSANAQGKYKKQSGGRGQYGDVWIRIDPAERETGFAFASEVVGGVVPTRYLPAVEKGLRETASEGILCGFPIVDI KAVVYDGSYHPVDSSEFAFKIASSMAFKSAFDKAKPMLLEPYCTLRVLAPEQYTGEIVGEISVKRGKIVGMDADGRFQTI NALIPQASLHDFHTRLVRLTQSRARYSYAFSHYEEVPQEIMQQLMKEYEK >Mature_690_residues MQAVQPDQLRNIVITGHSGSGKTMLAESFALSMKVINRLGSIEDGSTLSDYAEDEIARQHSLNTSLINGEWNGNKINIID VPGLLDFHGDVKSAMRVADTILITVNSATGLEVGTDMVWEYTREYYKPTIFVLTKLDADRTDFEQTIEDLKKQYGHLVTP IQFPAEEGLGHHIIIDVLLMKQLEFSPDKPGTMTISEIPDLYRKKAEELHHNLVEAVAETDEELMNKYFEIGTLSEDELR AGIKSSLLTRTFFPVFCTSPLHLIGSERLLNAIVNICPSPIERGPEHAYCSTENHDTLIEPDPEGRTIAFIFKTLSEPRL GEISYLRVYSGHIETGHELIDAQTGQLEKIGQVYTMAGEKKIPVDKLVAGDIGMVVKLKDAHTNDTLADKGTDCRISPII FPEPVYATAIAPVAQGDEEKISSGLHHLHEEDPSFSIEHEPEFNQTILKTLGETHLDIIINRLEKKFNVSVQRLPVKISY RETIRVSANAQGKYKKQSGGRGQYGDVWIRIDPAERETGFAFASEVVGGVVPTRYLPAVEKGLRETASEGILCGFPIVDI KAVVYDGSYHPVDSSEFAFKIASSMAFKSAFDKAKPMLLEPYCTLRVLAPEQYTGEIVGEISVKRGKIVGMDADGRFQTI NALIPQASLHDFHTRLVRLTQSRARYSYAFSHYEEVPQEIMQQLMKEYEK
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=703, Percent_Identity=28.3072546230441, Blast_Score=299, Evalue=5e-81, Organism=Homo sapiens, GI19923640, Length=713, Percent_Identity=24.4039270687237, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI25306287, Length=691, Percent_Identity=24.4573082489146, Blast_Score=192, Evalue=6e-49, Organism=Homo sapiens, GI25306283, Length=391, Percent_Identity=25.8312020460358, Blast_Score=133, Evalue=5e-31, Organism=Escherichia coli, GI1789738, Length=696, Percent_Identity=34.3390804597701, Blast_Score=430, Evalue=1e-121, Organism=Escherichia coli, GI1790835, Length=481, Percent_Identity=23.2848232848233, Blast_Score=97, Evalue=3e-21, Organism=Caenorhabditis elegans, GI17533571, Length=703, Percent_Identity=26.3157894736842, Blast_Score=280, Evalue=2e-75, Organism=Caenorhabditis elegans, GI17556745, Length=721, Percent_Identity=23.0235783633842, Blast_Score=166, Evalue=5e-41, Organism=Saccharomyces cerevisiae, GI6323098, Length=692, Percent_Identity=27.8901734104046, Blast_Score=312, Evalue=1e-85, Organism=Saccharomyces cerevisiae, GI6322359, Length=797, Percent_Identity=23.7139272271016, Blast_Score=219, Evalue=8e-58, Organism=Drosophila melanogaster, GI24582462, Length=695, Percent_Identity=27.9136690647482, Blast_Score=307, Evalue=2e-83, Organism=Drosophila melanogaster, GI221458488, Length=724, Percent_Identity=23.2044198895028, Blast_Score=185, Evalue=7e-47,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 77032; Mature: 77032
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAVQPDQLRNIVITGHSGSGKTMLAESFALSMKVINRLGSIEDGSTLSDYAEDEIARQH CCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH SLNTSLINGEWNGNKINIIDVPGLLDFHGDVKSAMRVADTILITVNSATGLEVGTDMVWE CCCCEEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHEEEEEEEECCCCCCCCHHHHHH YTREYYKPTIFVLTKLDADRTDFEQTIEDLKKQYGHLVTPIQFPAEEGLGHHIIIDVLLM HHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCEECCEECCHHHCCCHHHHHHHHHH KQLEFSPDKPGTMTISEIPDLYRKKAEELHHNLVEAVAETDEELMNKYFEIGTLSEDELR HHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH AGIKSSLLTRTFFPVFCTSPLHLIGSERLLNAIVNICPSPIERGPEHAYCSTENHDTLIE HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCEECCCCCCCEEC PDPEGRTIAFIFKTLSEPRLGEISYLRVYSGHIETGHELIDAQTGQLEKIGQVYTMAGEK CCCCCCEEEEEEHHCCCCCCCCEEEEEEEECCCCCCHHHHCCCCCCHHHHHHHHEECCCC KIPVDKLVAGDIGMVVKLKDAHTNDTLADKGTDCRISPIIFPEPVYATAIAPVAQGDEEK CCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEECCEECCCCHHHHHHHHHCCCCHHH ISSGLHHLHEEDPSFSIEHEPEFNQTILKTLGETHLDIIINRLEKKFNVSVQRLPVKISY HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCEEEEEEEEEEE RETIRVSANAQGKYKKQSGGRGQYGDVWIRIDPAERETGFAFASEVVGGVVPTRYLPAVE EEEEEEECCCCCCEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHH KGLRETASEGILCGFPIVDIKAVVYDGSYHPVDSSEFAFKIASSMAFKSAFDKAKPMLLE HHHHHHHHCCCEECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEC PYCTLRVLAPEQYTGEIVGEISVKRGKIVGMDADGRFQTINALIPQASLHDFHTRLVRLT CCEEEEEECCCCCCCCEEEEEEEECCEEEEECCCCCEEEHHHHCCCCHHHHHHHHHHHHH QSRARYSYAFSHYEEVPQEIMQQLMKEYEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQAVQPDQLRNIVITGHSGSGKTMLAESFALSMKVINRLGSIEDGSTLSDYAEDEIARQH CCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH SLNTSLINGEWNGNKINIIDVPGLLDFHGDVKSAMRVADTILITVNSATGLEVGTDMVWE CCCCEEECCCCCCCEEEEEECCCCCCCCCHHHHHHHHHEEEEEEEECCCCCCCCHHHHHH YTREYYKPTIFVLTKLDADRTDFEQTIEDLKKQYGHLVTPIQFPAEEGLGHHIIIDVLLM HHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCEECCEECCHHHCCCHHHHHHHHHH KQLEFSPDKPGTMTISEIPDLYRKKAEELHHNLVEAVAETDEELMNKYFEIGTLSEDELR HHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH AGIKSSLLTRTFFPVFCTSPLHLIGSERLLNAIVNICPSPIERGPEHAYCSTENHDTLIE HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCEECCCCCCCEEC PDPEGRTIAFIFKTLSEPRLGEISYLRVYSGHIETGHELIDAQTGQLEKIGQVYTMAGEK CCCCCCEEEEEEHHCCCCCCCCEEEEEEEECCCCCCHHHHCCCCCCHHHHHHHHEECCCC KIPVDKLVAGDIGMVVKLKDAHTNDTLADKGTDCRISPIIFPEPVYATAIAPVAQGDEEK CCCHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEECCEECCCCHHHHHHHHHCCCCHHH ISSGLHHLHEEDPSFSIEHEPEFNQTILKTLGETHLDIIINRLEKKFNVSVQRLPVKISY HHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHCCEEEEEEEEEEE RETIRVSANAQGKYKKQSGGRGQYGDVWIRIDPAERETGFAFASEVVGGVVPTRYLPAVE EEEEEEECCCCCCEECCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHH KGLRETASEGILCGFPIVDIKAVVYDGSYHPVDSSEFAFKIASSMAFKSAFDKAKPMLLE HHHHHHHHCCCEECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEC PYCTLRVLAPEQYTGEIVGEISVKRGKIVGMDADGRFQTINALIPQASLHDFHTRLVRLT CCEEEEEECCCCCCCCEEEEEEEECCEEEEECCCCCEEEHHHHCCCCHHHHHHHHHHHHH QSRARYSYAFSHYEEVPQEIMQQLMKEYEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12235376 [H]