Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
---|---|
Accession | NC_011059 |
Length | 2,512,923 |
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The map label for this gene is plsC [H]
Identifier: 194333103
GI number: 194333103
Start: 268696
End: 269406
Strand: Reverse
Name: plsC [H]
Synonym: Paes_0259
Alternate gene names: 194333103
Gene position: 269406-268696 (Counterclockwise)
Preceding gene: 194333104
Following gene: 194333102
Centisome position: 10.72
GC content: 51.34
Gene sequence:
>711_bases ATGAACCTTCAGACCCTCTTATTCTTTCTGGTTATTCTCCCGGTGACGTTTTTCGGTTTACTGATAGCACTGCTCGTCAA CCTCATCGACCCATCCGGCGACGGATTTCACCGTATGGCCGCCTGGTGGGGACGATTCTGTGCAAAACTGCTGGGCATCA GGATTGACGTCGTCGGCAGAGAGCACTACGACGCCACAAAAAACTATCTGGTCATAAGCAACCACGCAGGTATGGCCGAC ATTCCGATCCTCCTTGGCACACTGCAACTGAACCTGCGTTTTGTCGCAAAGGAAGAGCTCGGGCGCATCCCTGTTTTTGG CTGGGCTCTCAAAAAGGGCGGCTATGTGCTCATCAAACGCGGCCAGAACAAAGAAGCGCTCAAAAGCCTGTTCAAAGCGG CAGAAGTCCTCAATAGCGGACGCTCTGTGCATATTTTCCCGGAAGGAACGCGCTCTGCGACCGGGGAACTGCTTCCGTTT AAAAGAGGCGCGTTTCTGATTGCCCAGAAAGCACCAACACCGATTCTTCCCATAGCCATTATCGGAAGCAGCACCATCAC TCCGAAAAAAAGCCTGAAAATCCGAAAAGGAACCATCAGGATTATCATCAATCCTCCAATAGAAACAAGCGGCAAAACAG CCCTGCAGCTGCAAGAAGCTGCATTTCAGACAATCAGCAGCGCCATCGAACAGTCTGGAATTTCGGCTTAA
Upstream 100 bases:
>100_bases GTAATCAACATGGCCAACAGACCCTCACCAGTTGCAGGCCAAGCGGTGAGAGTCTGTCTCCACCCCTTATTGACTTTTTT TACCTTTGTCCACTTCGCTG
Downstream 100 bases:
>100_bases AAAAACAGTATGAAGCTCATGATCAACGGCGTGAACGCCTATGCAGGTCTTACCGACCCAAAACGAATACTTTGAATAAC CTGCATTTTTCTGATACCTT
Product: 1-acyl-sn-glycerol-3-phosphate acyltransferase
Products: NA
Alternate protein names: 1-AGP acyltransferase; 1-AGPAT; Lysophosphatidic acid acyltransferase; LPAAT [H]
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MNLQTLLFFLVILPVTFFGLLIALLVNLIDPSGDGFHRMAAWWGRFCAKLLGIRIDVVGREHYDATKNYLVISNHAGMAD IPILLGTLQLNLRFVAKEELGRIPVFGWALKKGGYVLIKRGQNKEALKSLFKAAEVLNSGRSVHIFPEGTRSATGELLPF KRGAFLIAQKAPTPILPIAIIGSSTITPKKSLKIRKGTIRIIINPPIETSGKTALQLQEAAFQTISSAIEQSGISA
Sequences:
>Translated_236_residues MNLQTLLFFLVILPVTFFGLLIALLVNLIDPSGDGFHRMAAWWGRFCAKLLGIRIDVVGREHYDATKNYLVISNHAGMAD IPILLGTLQLNLRFVAKEELGRIPVFGWALKKGGYVLIKRGQNKEALKSLFKAAEVLNSGRSVHIFPEGTRSATGELLPF KRGAFLIAQKAPTPILPIAIIGSSTITPKKSLKIRKGTIRIIINPPIETSGKTALQLQEAAFQTISSAIEQSGISA >Mature_236_residues MNLQTLLFFLVILPVTFFGLLIALLVNLIDPSGDGFHRMAAWWGRFCAKLLGIRIDVVGREHYDATKNYLVISNHAGMAD IPILLGTLQLNLRFVAKEELGRIPVFGWALKKGGYVLIKRGQNKEALKSLFKAAEVLNSGRSVHIFPEGTRSATGELLPF KRGAFLIAQKAPTPILPIAIIGSSTITPKKSLKIRKGTIRIIINPPIETSGKTALQLQEAAFQTISSAIEQSGISA
Specific function: Converts lysophosphatidic acid (LPA) into phosphatidic acid by incorporating acyl moiety at the 2 position [H]
COG id: COG0204
COG function: function code I; 1-acyl-sn-glycerol-3-phosphate acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI5453718, Length=165, Percent_Identity=33.9393939393939, Blast_Score=98, Evalue=5e-21, Organism=Homo sapiens, GI15100175, Length=165, Percent_Identity=33.9393939393939, Blast_Score=98, Evalue=5e-21, Organism=Homo sapiens, GI6041665, Length=196, Percent_Identity=30.1020408163265, Blast_Score=86, Evalue=3e-17, Organism=Escherichia coli, GI1789395, Length=194, Percent_Identity=32.4742268041237, Blast_Score=75, Evalue=5e-15, Organism=Caenorhabditis elegans, GI17568319, Length=179, Percent_Identity=28.4916201117318, Blast_Score=82, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17564032, Length=230, Percent_Identity=27.3913043478261, Blast_Score=77, Evalue=7e-15, Organism=Saccharomyces cerevisiae, GI6320151, Length=227, Percent_Identity=33.0396475770925, Blast_Score=112, Evalue=4e-26, Organism=Drosophila melanogaster, GI24641614, Length=231, Percent_Identity=27.7056277056277, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24641612, Length=231, Percent_Identity=27.7056277056277, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI281364648, Length=214, Percent_Identity=30.3738317757009, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24582856, Length=214, Percent_Identity=30.3738317757009, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24582854, Length=214, Percent_Identity=30.3738317757009, Blast_Score=80, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002123 - InterPro: IPR004552 [H]
Pfam domain/function: PF01553 Acyltransferase [H]
EC number: =2.3.1.51 [H]
Molecular weight: Translated: 25756; Mature: 25756
Theoretical pI: Translated: 10.83; Mature: 10.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLQTLLFFLVILPVTFFGLLIALLVNLIDPSGDGFHRMAAWWGRFCAKLLGIRIDVVGR CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCEEEEEECC EHYDATKNYLVISNHAGMADIPILLGTLQLNLRFVAKEELGRIPVFGWALKKGGYVLIKR CCCCCCCCEEEEECCCCCCHHHHHEEEEEEEEEEEEHHHCCCCCEEEEEECCCCEEEEEC GQNKEALKSLFKAAEVLNSGRSVHIFPEGTRSATGELLPFKRGAFLIAQKAPTPILPIAI CCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEE IGSSTITPKKSLKIRKGTIRIIINPPIETSGKTALQLQEAAFQTISSAIEQSGISA ECCCCCCCCCCEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNLQTLLFFLVILPVTFFGLLIALLVNLIDPSGDGFHRMAAWWGRFCAKLLGIRIDVVGR CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCEEEEEECC EHYDATKNYLVISNHAGMADIPILLGTLQLNLRFVAKEELGRIPVFGWALKKGGYVLIKR CCCCCCCCEEEEECCCCCCHHHHHEEEEEEEEEEEEHHHCCCCCEEEEEECCCCEEEEEC GQNKEALKSLFKAAEVLNSGRSVHIFPEGTRSATGELLPFKRGAFLIAQKAPTPILPIAI CCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEE IGSSTITPKKSLKIRKGTIRIIINPPIETSGKTALQLQEAAFQTISSAIEQSGISA ECCCCCCCCCCEEEECCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9252185 [H]