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The map label for this gene is yraN [C]

Identifier: 194332869

GI number: 194332869

Start: 19561

End: 19944

Strand: Reverse

Name: yraN [C]

Synonym: Paes_0016

Alternate gene names: 194332869

Gene position: 19944-19561 (Counterclockwise)

Preceding gene: 194332870

Following gene: 194332868

Centisome position: 0.79

GC content: 50.26

Gene sequence:

>384_bases
ATGTCACTCATCCCCCATGACCTTGGACGACAGGGAGAAGATGCAGCAGCATCATGGCTGCTCTGCAAAGGGTACCGTAT
TATCCGACGCAACTACCGCTACCGGCGCAACGAAATCGATATCATCGCTATGGATGACCGGACACTCTGCTTTGTCGAAG
TCAAAACACGGGCGACAATTGACAAAGGCCATCCTCTCGAAGCGGTCACCCCTCAAAAACAGAAAGAGATCATCAGGACT
GCTCGTGCGTTTCTCTGTATGGAATACCACGAGGAAATCGACTGCCGATTCGATGTTGTCGCTATCATCGCAAAAGGCTA
TGAAAAAGGACGATTGAAGGAGTTCGATGTCGAACACATCACTGATGCCTTCTGGGCGGAATGA

Upstream 100 bases:

>100_bases
GAGAACATATCGAAGCCATAAGAAACCATGGACGCTCTCCGATCCACAGGATGAGCTTCCGGCTCCGCCAGCTCGGAGAA
AAATAACCCCGCAGAAAACT

Downstream 100 bases:

>100_bases
CGCCGCCAACATAGCATATAACGGTAATTTTCGCTATCTTTGAAATCAGATTTTTTAACGTATACAACGTTTTTTTCCAG
GAAAATTCACTATGTCAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MSLIPHDLGRQGEDAAASWLLCKGYRIIRRNYRYRRNEIDIIAMDDRTLCFVEVKTRATIDKGHPLEAVTPQKQKEIIRT
ARAFLCMEYHEEIDCRFDVVAIIAKGYEKGRLKEFDVEHITDAFWAE

Sequences:

>Translated_127_residues
MSLIPHDLGRQGEDAAASWLLCKGYRIIRRNYRYRRNEIDIIAMDDRTLCFVEVKTRATIDKGHPLEAVTPQKQKEIIRT
ARAFLCMEYHEEIDCRFDVVAIIAKGYEKGRLKEFDVEHITDAFWAE
>Mature_126_residues
SLIPHDLGRQGEDAAASWLLCKGYRIIRRNYRYRRNEIDIIAMDDRTLCFVEVKTRATIDKGHPLEAVTPQKQKEIIRTA
RAFLCMEYHEEIDCRFDVVAIIAKGYEKGRLKEFDVEHITDAFWAE

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

Organism=Escherichia coli, GI1789538, Length=124, Percent_Identity=37.0967741935484, Blast_Score=69, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y016_PROA2 (B4S950)

Other databases:

- EMBL:   CP001108
- RefSeq:   YP_002014729.1
- ProteinModelPortal:   B4S950
- GeneID:   6458415
- GenomeReviews:   CP001108_GR
- KEGG:   paa:Paes_0016
- HOGENOM:   HBG710155
- OMA:   KQRQISK
- ProtClustDB:   PRK12497
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10
- TIGRFAMs:   TIGR00252

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 14904; Mature: 14773

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLIPHDLGRQGEDAAASWLLCKGYRIIRRNYRYRRNEIDIIAMDDRTLCFVEVKTRATI
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEEECCEEC
DKGHPLEAVTPQKQKEIIRTARAFLCMEYHEEIDCRFDVVAIIAKGYEKGRLKEFDVEHI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHH
TDAFWAE
HHHHCCC
>Mature Secondary Structure 
SLIPHDLGRQGEDAAASWLLCKGYRIIRRNYRYRRNEIDIIAMDDRTLCFVEVKTRATI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEEECCEEC
DKGHPLEAVTPQKQKEIIRTARAFLCMEYHEEIDCRFDVVAIIAKGYEKGRLKEFDVEHI
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHH
TDAFWAE
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA