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The map label for this gene is ybbC [H]

Identifier: 193213570

GI number: 193213570

Start: 2130261

End: 2131427

Strand: Direct

Name: ybbC [H]

Synonym: Cpar_1931

Alternate gene names: 193213570

Gene position: 2130261-2131427 (Clockwise)

Preceding gene: 193213569

Following gene: 193213571

Centisome position: 93.06

GC content: 61.61

Gene sequence:

>1167_bases
ATGGTCATCAACGGTCTCGACATCCTGCTCGGCAATCCCGATCTGCTGGCTGGCAGAAGCATCGGCCTGATCGCCAACCA
GACATCGGTATCGTCGAAACTCGACTATTCGTGGACGCTGCTGCGACGCGCCGGTGTCGAACTCACCCGAATCTTTTCGC
CCGAACACGGCCTGTTCGCCGTCGAGCAGGATCAGATCGCCGTAGATCGTGAACCCGAGACCGGCTGTGAAATCGTCAGC
CTGTACGGCCACAACGAGCAGTCGCTCGCCCCGGCCCGCGAGCTGCTCGAAGGGCTCGACCTGGTGCTGTTCGACATTCA
GGATGTCGGCTCGCGCTACTACACCTACGTCAACACGCTGGCGCTCTTCATGGAGGCTGCGCAGGGGCTCGACATCGAAA
TCATGGTGCTCGACCGGCCGAACCCACTCGGCGGCGAGCTGATCGAAGGCCCATTGCTCGACCCGGCGTTCCACTCGTTC
GTCGGGGTAATGCCGGTGCCGGTGCGCCACGGCCTGACCGCCGGAGAGATCGCCCACTTCTACCGCGACTACAAAAAGCT
CGACCTCAACCTGAGCGTGCTTGCGATGCAGGGCTGGTCGCGCCGGATGCTCTTTCCGGAAACCGGACTGCCGTGGGTGC
CGCCGTCGCCGAACATGCCAACGTTCGAAGTCGCGGAGGTCTATCCCGGCATGTGCCTGTTCGAGGGTCTCAATGTTTCG
GAGGGGCGCGGCTCAACCACACCGTTCCTGCTGAGCGGCGCGCCATTCGTCGATCCGGAAGCGCTTGCCGCACGTCTCAG
CTCGATGCCACTGGAGGGCGTTGTCTTCCGTCCAACCTGGTTCAGACCGACCTTCCACAAGTATGCCGGTGGAGTCGTCG
GCGGCATCTACCTGCACGTGACCGACCGCGAGCGATTCCGCCCTTTCGCAACCGGAGTAGCCATGACCTGCGCGCTTCGC
GAGCTGTACGGCGACCGCCTCTCGTTTCTGGACGGTGTGTATGAGTTCAGGGATGACATCCCCGCATTTGACCTACTTGC
CGGAAGCAGTGAAATCCGTTCGATGATTCTCGACGGAAAACCCGCCGAAACCATCATCAGCTCCTGGCAGCAGGACGAAG
CCTCGTTTGCCGCCATCAAACCCAACTTCCATCTGTACGACTCGTAA

Upstream 100 bases:

>100_bases
GCCCGGCACGATAATCGGCCCGGATGAAGCTGTCAGAAATTCAATTGCCGCACCACCGAACGTGCGCATTCCGCTCTGAA
CCTCTCATTTCACAAACGGC

Downstream 100 bases:

>100_bases
CCCGCAGATCTCGATGCAACCGATCGATTACGCTATCATCATCAGCTTCCTCGCGGCCAGCACGCTTTTCGGCCTCTGGC
AGGGTCGCAGCAACAAGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MVINGLDILLGNPDLLAGRSIGLIANQTSVSSKLDYSWTLLRRAGVELTRIFSPEHGLFAVEQDQIAVDREPETGCEIVS
LYGHNEQSLAPARELLEGLDLVLFDIQDVGSRYYTYVNTLALFMEAAQGLDIEIMVLDRPNPLGGELIEGPLLDPAFHSF
VGVMPVPVRHGLTAGEIAHFYRDYKKLDLNLSVLAMQGWSRRMLFPETGLPWVPPSPNMPTFEVAEVYPGMCLFEGLNVS
EGRGSTTPFLLSGAPFVDPEALAARLSSMPLEGVVFRPTWFRPTFHKYAGGVVGGIYLHVTDRERFRPFATGVAMTCALR
ELYGDRLSFLDGVYEFRDDIPAFDLLAGSSEIRSMILDGKPAETIISSWQQDEASFAAIKPNFHLYDS

Sequences:

>Translated_388_residues
MVINGLDILLGNPDLLAGRSIGLIANQTSVSSKLDYSWTLLRRAGVELTRIFSPEHGLFAVEQDQIAVDREPETGCEIVS
LYGHNEQSLAPARELLEGLDLVLFDIQDVGSRYYTYVNTLALFMEAAQGLDIEIMVLDRPNPLGGELIEGPLLDPAFHSF
VGVMPVPVRHGLTAGEIAHFYRDYKKLDLNLSVLAMQGWSRRMLFPETGLPWVPPSPNMPTFEVAEVYPGMCLFEGLNVS
EGRGSTTPFLLSGAPFVDPEALAARLSSMPLEGVVFRPTWFRPTFHKYAGGVVGGIYLHVTDRERFRPFATGVAMTCALR
ELYGDRLSFLDGVYEFRDDIPAFDLLAGSSEIRSMILDGKPAETIISSWQQDEASFAAIKPNFHLYDS
>Mature_388_residues
MVINGLDILLGNPDLLAGRSIGLIANQTSVSSKLDYSWTLLRRAGVELTRIFSPEHGLFAVEQDQIAVDREPETGCEIVS
LYGHNEQSLAPARELLEGLDLVLFDIQDVGSRYYTYVNTLALFMEAAQGLDIEIMVLDRPNPLGGELIEGPLLDPAFHSF
VGVMPVPVRHGLTAGEIAHFYRDYKKLDLNLSVLAMQGWSRRMLFPETGLPWVPPSPNMPTFEVAEVYPGMCLFEGLNVS
EGRGSTTPFLLSGAPFVDPEALAARLSSMPLEGVVFRPTWFRPTFHKYAGGVVGGIYLHVTDRERFRPFATGVAMTCALR
ELYGDRLSFLDGVYEFRDDIPAFDLLAGSSEIRSMILDGKPAETIISSWQQDEASFAAIKPNFHLYDS

Specific function: Unknown

COG id: COG3876

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008302 [H]

Pfam domain/function: PF07075 DUF1343 [H]

EC number: NA

Molecular weight: Translated: 42925; Mature: 42925

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVINGLDILLGNPDLLAGRSIGLIANQTSVSSKLDYSWTLLRRAGVELTRIFSPEHGLFA
CEEECEEEEECCCCEECCCCEEEEECCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCEEE
VEQDQIAVDREPETGCEIVSLYGHNEQSLAPARELLEGLDLVLFDIQDVGSRYYTYVNTL
EECCCEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHH
ALFMEAAQGLDIEIMVLDRPNPLGGELIEGPLLDPAFHSFVGVMPVPVRHGLTAGEIAHF
HHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHCCCCHHHHHHH
YRDYKKLDLNLSVLAMQGWSRRMLFPETGLPWVPPSPNMPTFEVAEVYPGMCLFEGLNVS
HHHHHHHCCCEEEEEECCCCCCEECCCCCCCCCCCCCCCCCEEHHHHCCCEEEEECCCCC
EGRGSTTPFLLSGAPFVDPEALAARLSSMPLEGVVFRPTWFRPTFHKYAGGVVGGIYLHV
CCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCHHHHCCCCEEEEEEEE
TDRERFRPFATGVAMTCALRELYGDRLSFLDGVYEFRDDIPAFDLLAGSSEIRSMILDGK
ECHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHCCCC
PAETIISSWQQDEASFAAIKPNFHLYDS
CHHHHHHHCCCCCCCEEEECCCEEECCC
>Mature Secondary Structure
MVINGLDILLGNPDLLAGRSIGLIANQTSVSSKLDYSWTLLRRAGVELTRIFSPEHGLFA
CEEECEEEEECCCCEECCCCEEEEECCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCEEE
VEQDQIAVDREPETGCEIVSLYGHNEQSLAPARELLEGLDLVLFDIQDVGSRYYTYVNTL
EECCCEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHH
ALFMEAAQGLDIEIMVLDRPNPLGGELIEGPLLDPAFHSFVGVMPVPVRHGLTAGEIAHF
HHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHCCCCHHHHHHH
YRDYKKLDLNLSVLAMQGWSRRMLFPETGLPWVPPSPNMPTFEVAEVYPGMCLFEGLNVS
HHHHHHHCCCEEEEEECCCCCCEECCCCCCCCCCCCCCCCCEEHHHHCCCEEEEECCCCC
EGRGSTTPFLLSGAPFVDPEALAARLSSMPLEGVVFRPTWFRPTFHKYAGGVVGGIYLHV
CCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCHHHHCCCCEEEEEEEE
TDRERFRPFATGVAMTCALRELYGDRLSFLDGVYEFRDDIPAFDLLAGSSEIRSMILDGK
ECHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHCCCC
PAETIISSWQQDEASFAAIKPNFHLYDS
CHHHHHHHCCCCCCCEEEECCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8011666; 9274029; 9384377 [H]