| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193213495
Identifier: 193213495
GI number: 193213495
Start: 2040355
End: 2041185
Strand: Direct
Name: 193213495
Synonym: Cpar_1856
Alternate gene names: NA
Gene position: 2040355-2041185 (Clockwise)
Preceding gene: 193213493
Following gene: 193213498
Centisome position: 89.13
GC content: 62.21
Gene sequence:
>831_bases ATGAAACTGACCATTCTCACCGACAACCAGGCCGCACCCGGACTTGCCTGCGAACACGGCTTCGCGGTGCTGATTGAAAC CGGCGGCAAGCGCATCCTTTTCGACACCGGCCAGCTCGGCGCATTCGACGCAAACTGCCGCGCGCTCGGCATCGACTTGT CGGACATCGACATCATCGTGCTCAGCCACGGCCACTACGACCACACCGGCAACCTCGCCGACGTGCTCCGAATCGCCGAC CGCGCCACGCTCTACCTCCACCCGTCAGCGCTCGTCGAACGCTACAGCATCCGCAACGGCAAGCCCAAACCCATCGACAT GCCCGAAGCCGCCAAGCAGGCAATTGACGAACTGCCGAAAGAGCGAATCGTGTGGGTTAGCGAACCGACGCGCCTGACCG ATGGCGTCTTCCTGACCGGCCCGGTCCCCCGCCAGACAACCTTCGAGGATACCGGCGGCCCGTTTTTCTTTGATCCGGAC GGAAAAACGCCTGACCCCATTGAAGACGATCTGTCGCTCTGGATCGAGAAGCCGGAAGGCCTGACCGTGCTCGCAGGATG TTGCCATTCCGGCATCGTCAACACGCTTGACTACATCGAGAGCATCACCGGGCAAAAACGGATCGCGACGCTTATCGGCG GAATGCACCTCTCGGCAGCCAGCCCGGAGCGCCTCGACCGCACCGTAGCATCGCTCGCCGAGCGCGACATCGCCCGCCTC ATTCCCTGCCACTGCACCGGGGAGGCAGCCGCAGAACGCTTCAGCAAAGAGCTGCCGTATCCAGTAGAGGCGGGTTATGC AGGCATGGTGGTGGAGTTAGGGAAAAAGTGA
Upstream 100 bases:
>100_bases GGCAACAAACAGTGAGCGTCACATGAGGCTAATGTTGTTAAGAGCGTTACCTTGTCAGAAATCGACTGAATTGAAACCTG TGCCGACATTTGACTGCATC
Downstream 100 bases:
>100_bases GGCCATCTACCAAGTCCACTTCCCAAGCCTGTTTCACTCCCCCTTCGCTTCAGCAATGAGCCGGTCGAGGCAGGTGCTGC AGACGCAGGTTTCGTAGCGT
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MKLTILTDNQAAPGLACEHGFAVLIETGGKRILFDTGQLGAFDANCRALGIDLSDIDIIVLSHGHYDHTGNLADVLRIAD RATLYLHPSALVERYSIRNGKPKPIDMPEAAKQAIDELPKERIVWVSEPTRLTDGVFLTGPVPRQTTFEDTGGPFFFDPD GKTPDPIEDDLSLWIEKPEGLTVLAGCCHSGIVNTLDYIESITGQKRIATLIGGMHLSAASPERLDRTVASLAERDIARL IPCHCTGEAAAERFSKELPYPVEAGYAGMVVELGKK
Sequences:
>Translated_276_residues MKLTILTDNQAAPGLACEHGFAVLIETGGKRILFDTGQLGAFDANCRALGIDLSDIDIIVLSHGHYDHTGNLADVLRIAD RATLYLHPSALVERYSIRNGKPKPIDMPEAAKQAIDELPKERIVWVSEPTRLTDGVFLTGPVPRQTTFEDTGGPFFFDPD GKTPDPIEDDLSLWIEKPEGLTVLAGCCHSGIVNTLDYIESITGQKRIATLIGGMHLSAASPERLDRTVASLAERDIARL IPCHCTGEAAAERFSKELPYPVEAGYAGMVVELGKK >Mature_276_residues MKLTILTDNQAAPGLACEHGFAVLIETGGKRILFDTGQLGAFDANCRALGIDLSDIDIIVLSHGHYDHTGNLADVLRIAD RATLYLHPSALVERYSIRNGKPKPIDMPEAAKQAIDELPKERIVWVSEPTRLTDGVFLTGPVPRQTTFEDTGGPFFFDPD GKTPDPIEDDLSLWIEKPEGLTVLAGCCHSGIVNTLDYIESITGQKRIATLIGGMHLSAASPERLDRTVASLAERDIARL IPCHCTGEAAAERFSKELPYPVEAGYAGMVVELGKK
Specific function: Catalyzes the condensation of 6-hydroxymethyl-7,8- dihydropterin pyrophosphate (DHPP) with 4-(beta-D-ribofuranosyl)- aminobenzene-5'-phosphate (beta-RFA-P) to form 7,8-dihydropterin- 6-methyl-4-(beta-D-ribofuranosyl)-aminobenzene-5'-phosphate, a precursor
COG id: COG1237
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily II
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 29931; Mature: 29931
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTILTDNQAAPGLACEHGFAVLIETGGKRILFDTGQLGAFDANCRALGIDLSDIDIIV CEEEEEECCCCCCCCEECCCCEEEEECCCCEEEEECCCCCCCCCCCEEEECCCCCEEEEE LSHGHYDHTGNLADVLRIADRATLYLHPSALVERYSIRNGKPKPIDMPEAAKQAIDELPK EECCCCCCCCCHHHHHHHHCCEEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCH ERIVWVSEPTRLTDGVFLTGPVPRQTTFEDTGGPFFFDPDGKTPDPIEDDLSLWIEKPEG HEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHEEEECCCC LTVLAGCCHSGIVNTLDYIESITGQKRIATLIGGMHLSAASPERLDRTVASLAERDIARL CEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH IPCHCTGEAAAERFSKELPYPVEAGYAGMVVELGKK CCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCC >Mature Secondary Structure MKLTILTDNQAAPGLACEHGFAVLIETGGKRILFDTGQLGAFDANCRALGIDLSDIDIIV CEEEEEECCCCCCCCEECCCCEEEEECCCCEEEEECCCCCCCCCCCEEEECCCCCEEEEE LSHGHYDHTGNLADVLRIADRATLYLHPSALVERYSIRNGKPKPIDMPEAAKQAIDELPK EECCCCCCCCCHHHHHHHHCCEEEEECHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCH ERIVWVSEPTRLTDGVFLTGPVPRQTTFEDTGGPFFFDPDGKTPDPIEDDLSLWIEKPEG HEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHEEEECCCC LTVLAGCCHSGIVNTLDYIESITGQKRIATLIGGMHLSAASPERLDRTVASLAERDIARL CEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH IPCHCTGEAAAERFSKELPYPVEAGYAGMVVELGKK CCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]