| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193213488
Identifier: 193213488
GI number: 193213488
Start: 2032869
End: 2033339
Strand: Direct
Name: 193213488
Synonym: Cpar_1849
Alternate gene names: NA
Gene position: 2032869-2033339 (Clockwise)
Preceding gene: 193213485
Following gene: 193213491
Centisome position: 88.8
GC content: 53.5
Gene sequence:
>471_bases ATGACCGTCACCCACATACTCCTCGACGACCAGAACCCCCTGCACCGCGAACTGCCGATCTACCGAAGTGGCAAAATCGG CGCCGTCAGGCTTGCCGACAAGAGCTACAAGGTGTACGATTCGATGGAAATCTCCGCCCACGACTACACCGCCCTGTTCC ACTACGGCGTCATCGAACAGCTCAACGCGCTACCGTTCATCTCCGAATCGAATAACGGGCTCGACAGTTGGGACGAGGCA TTTCTACCCTCTGGCGCGATTGGCAGAATGATTGAGATTATCGACGAATTCGTCGGAGAGATAAGCGGGAAAAGCCCCGA AAAGGTGATGCTCGGCTGGCAGGACGATCCGGAACGCATCGCCTACTGGCGCGAGATCGATCCCGAAAAGACGATTGATT TCCTGAGGAAATTCCAGGAATTCGCTACCAAAGTTCAGGAAGAGGAATACGATCTAGAATTCATTTTGTAG
Upstream 100 bases:
>100_bases ACATTCAGTTAAATAACTATAATTAAGACGTCATCTCAAACCATTTCCTTCGATCAAAACAGTGGCGAGAAATTAATCGT TTCAGACCGCCCCTTGCGCT
Downstream 100 bases:
>100_bases GAACCGACCCTTCGCGTGACGAAGCGAAAAGGGTAGGCACAAGGCCTACCCCTACCGATCAATTATCAACTTTCAATTGC CGCCCCGCGCCATGCCGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 156; Mature: 155
Protein sequence:
>156_residues MTVTHILLDDQNPLHRELPIYRSGKIGAVRLADKSYKVYDSMEISAHDYTALFHYGVIEQLNALPFISESNNGLDSWDEA FLPSGAIGRMIEIIDEFVGEISGKSPEKVMLGWQDDPERIAYWREIDPEKTIDFLRKFQEFATKVQEEEYDLEFIL
Sequences:
>Translated_156_residues MTVTHILLDDQNPLHRELPIYRSGKIGAVRLADKSYKVYDSMEISAHDYTALFHYGVIEQLNALPFISESNNGLDSWDEA FLPSGAIGRMIEIIDEFVGEISGKSPEKVMLGWQDDPERIAYWREIDPEKTIDFLRKFQEFATKVQEEEYDLEFIL >Mature_155_residues TVTHILLDDQNPLHRELPIYRSGKIGAVRLADKSYKVYDSMEISAHDYTALFHYGVIEQLNALPFISESNNGLDSWDEAF LPSGAIGRMIEIIDEFVGEISGKSPEKVMLGWQDDPERIAYWREIDPEKTIDFLRKFQEFATKVQEEEYDLEFIL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18062; Mature: 17930
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTHILLDDQNPLHRELPIYRSGKIGAVRLADKSYKVYDSMEISAHDYTALFHYGVIEQ CCEEEEEECCCCCCHHCCCCEECCCCCEEEECCCCEEEECCEEECCCHHHHHHHHHHHHH LNALPFISESNNGLDSWDEAFLPSGAIGRMIEIIDEFVGEISGKSPEKVMLGWQDDPERI HHCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHH AYWREIDPEKTIDFLRKFQEFATKVQEEEYDLEFIL HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEC >Mature Secondary Structure TVTHILLDDQNPLHRELPIYRSGKIGAVRLADKSYKVYDSMEISAHDYTALFHYGVIEQ CEEEEEECCCCCCHHCCCCEECCCCCEEEECCCCEEEECCEEECCCHHHHHHHHHHHHH LNALPFISESNNGLDSWDEAFLPSGAIGRMIEIIDEFVGEISGKSPEKVMLGWQDDPERI HHCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHH AYWREIDPEKTIDFLRKFQEFATKVQEEEYDLEFIL HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA