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The map label for this gene is 193213467

Identifier: 193213467

GI number: 193213467

Start: 2008403

End: 2009026

Strand: Direct

Name: 193213467

Synonym: Cpar_1828

Alternate gene names: NA

Gene position: 2008403-2009026 (Clockwise)

Preceding gene: 193213466

Following gene: 193213468

Centisome position: 87.73

GC content: 58.01

Gene sequence:

>624_bases
ATGACGCAGGAATCGCTTTTCGATCCCGTTCCGGAACAACCGAAACAGCAAGCAGTCCCGGCCCTCGATCTCGGCTCGCT
CGGCAAAGTCGTTCAGGAATGCCGGAAATGCAGGCTCGCTGAAACGCGCAACAGCGTGGTGTTCGGCGAAGGGAATCCCA
AAGCGCGGGTTTTCGTTATAGGAGAGGCTCCCGGAGCGGATGAGGACGCGCAGGGGCGCCCCTTCGTGGGCCGGTCGGGT
CAGTTGCTCGACAAAATTCTGCTCGCTATCGGCTTCGAACGCAGTGACGTCTATATCGGCAACATCATCAAGTGCCGACC
GCCGCAAAACCGCAATCCGCTCGGTGACGAAATCGAGTGCTGCAAGCCCTGGCTAATGCAGCAGCTTGAAATCATCAAGC
CGAACATCATTCTCCTTTTGGGTCGGGTAGCGGCAAACACCATTCTTGAGAACACGCTCTCGATGAGCGCCATGCGGGGC
AAGCTGATCCGATGGAACGGATTCGACTGTTTTGTGACCTACCACCCGGCCGCGCTGCTCAGGAATCCAAACTGGAAGCG
CCTTTGCTGGGAGGATGTGCAACTGCTCCGGGCGCATTACGACAAGGTCTGCCCGAACAGCTGA

Upstream 100 bases:

>100_bases
ACCGAGCTGCCCCTGCTCAGCAAGGAGGAGGCTGCCGAGCGGCTGCTCGATGCCATCGAACTGCTTCTGCCCCGATAATC
GAAATTTCCGAAAAACCATC

Downstream 100 bases:

>100_bases
CCGCATATGGAAACCATGATACGACGAGGAAAACAAGAGGAATGAAGCCGCGCGAAGCACAAGTAGATTTAAGCCGTGAC
ATCGACTTCAGCAAAGAGAG

Product: phage SPO1 DNA polymerase-like protein

Products: diphosphate; DNAn+1

Alternate protein names: Uracil-DNA Glycosylase; Phage SPO1 DNA Polymerase-Like Protein; DNA Polymerase; DNA Polymerase Bacteriophage-Type; Uracil DNA Glycosylase Superfamily Protein; DNA-Directed DNA Polymerase; DNA Glycosylase; DNA Polymerase-Related Protein; DNA Polymerase-Related Protein Bacteriophage-Type; Uracil-DNA Glycosylase Family 4 Protein; Bacteriophage-Related DNA Polymerase; Phage Spo1 DNA Polymerase-Related Protein; Phage DNA Polymerase; Phage SPO1 DNA Polymerase Domain-Containing Protein; DNA Polymerase Domain-Containing Protein; Phage Related DNA Polymerase; Phage SpO1 DNA Polymerase-Related Protein; Arginine Biosynthesis Bifunctional Protein ArgJ; Bacteriophage-Type DNA Polymerase; DNA Polymerase Related Protein; Phage DNA Polymerase-Related Protein; DNA-Directed DNA Polymerase Bacteriophage-Type; Uracil-DNA Glycosylase Phage-Related Protein; Uracil-DNA Glycosylase Superfamily Protein; Phage Shock Protein E; C-Terminal Part Of DNA Polymerase Bacteriophage-Type; Phage Spo1 DNA Polymerase Domain Protein; Uracil-DNA Glycosylase-Like Protein; Uracil-DNA Glycosylase-Related Protein; Bacteriophage-Type DNA Polymerase N-Terminal Domain Protein; N-Terminus Of Phage SPO1 DNA Polymerase

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MTQESLFDPVPEQPKQQAVPALDLGSLGKVVQECRKCRLAETRNSVVFGEGNPKARVFVIGEAPGADEDAQGRPFVGRSG
QLLDKILLAIGFERSDVYIGNIIKCRPPQNRNPLGDEIECCKPWLMQQLEIIKPNIILLLGRVAANTILENTLSMSAMRG
KLIRWNGFDCFVTYHPAALLRNPNWKRLCWEDVQLLRAHYDKVCPNS

Sequences:

>Translated_207_residues
MTQESLFDPVPEQPKQQAVPALDLGSLGKVVQECRKCRLAETRNSVVFGEGNPKARVFVIGEAPGADEDAQGRPFVGRSG
QLLDKILLAIGFERSDVYIGNIIKCRPPQNRNPLGDEIECCKPWLMQQLEIIKPNIILLLGRVAANTILENTLSMSAMRG
KLIRWNGFDCFVTYHPAALLRNPNWKRLCWEDVQLLRAHYDKVCPNS
>Mature_206_residues
TQESLFDPVPEQPKQQAVPALDLGSLGKVVQECRKCRLAETRNSVVFGEGNPKARVFVIGEAPGADEDAQGRPFVGRSGQ
LLDKILLAIGFERSDVYIGNIIKCRPPQNRNPLGDEIECCKPWLMQQLEIIKPNIILLLGRVAANTILENTLSMSAMRGK
LIRWNGFDCFVTYHPAALLRNPNWKRLCWEDVQLLRAHYDKVCPNS

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.7.7.7

Molecular weight: Translated: 23239; Mature: 23108

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQESLFDPVPEQPKQQAVPALDLGSLGKVVQECRKCRLAETRNSVVFGEGNPKARVFVI
CCCCHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEE
GEAPGADEDAQGRPFVGRSGQLLDKILLAIGFERSDVYIGNIIKCRPPQNRNPLGDEIEC
ECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCEEEECCCCCCCCCCCHHHH
CKPWLMQQLEIIKPNIILLLGRVAANTILENTLSMSAMRGKLIRWNGFDCFVTYHPAALL
HHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCEEEECCEEEEEEECCHHHH
RNPNWKRLCWEDVQLLRAHYDKVCPNS
CCCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TQESLFDPVPEQPKQQAVPALDLGSLGKVVQECRKCRLAETRNSVVFGEGNPKARVFVI
CCCHHCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEE
GEAPGADEDAQGRPFVGRSGQLLDKILLAIGFERSDVYIGNIIKCRPPQNRNPLGDEIEC
ECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEECCEEEECCCCCCCCCCCHHHH
CKPWLMQQLEIIKPNIILLLGRVAANTILENTLSMSAMRGKLIRWNGFDCFVTYHPAALL
HHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCEEEECCEEEEEEECCHHHH
RNPNWKRLCWEDVQLLRAHYDKVCPNS
CCCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA