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The map label for this gene is rfaQ [C]

Identifier: 193213446

GI number: 193213446

Start: 1978764

End: 1979651

Strand: Direct

Name: rfaQ [C]

Synonym: Cpar_1807

Alternate gene names: 193213446

Gene position: 1978764-1979651 (Clockwise)

Preceding gene: 193213444

Following gene: 193213447

Centisome position: 86.44

GC content: 56.76

Gene sequence:

>888_bases
GTGCTGCTCACCCCGCTCATCCGGAACCTGCGCAAACGGCATCCCGATCTCGAGATCCACATCATCGCTTTCAGCCAGGC
ATCTGCGGCCTTCTTCAAGAATGATCCAGCAGTCACCGCAATACATCTGGCAAAAAAAAATCCGTTGCAGCACCTGAAAG
GGGTTCGCTCTGCACGCTTTGACCTGCTGTTCAACACCAAGGATCACCCGTCGACCCACTTCCTGCTTCAGAGCGTGCTT
ATCCCTGCCCGGTTCAAGGTCGGCCACGCAAACCCTTTTCATAAAGGGCTGTACGACCGCCTTATCGATATGGATTTTCA
CAGCCACATGGCGCTCAAAAACTGCTCGTTGCTGACGGTGCTAGGCATCGATGCCAGCACCGAAGATTGCCGCCCATCGT
TGCCCGCAATGCCGGTGTCAAACGAGATACTGCAACTGTTGCGTCAGCTGGATGGCCTACGTCCGATCGGCGTCAACATT
AGCGCGGGACAGCCCAACCGCTACTGGACTGAGGAGAAGTGGAAAACACTGATCGGAAGTTTTCCAGATGAGCGCTTCGT
GGTACTCTCCGCCCCTGACGACACGGATGCAAAACAGCGCCTCGAAAAAAGCTGCCCCAACGCAATCACTACGCCCCCCA
CCCGCAACCTGTATGAAGCGAGCTGCATCGTAGCTGCACTCCGGTTGCTGGTCACCCCCGACACTTCGATGGTGCATGTA
GCTTCTGGCGCTGGCATCCCGATCGTCGGCCTGTACCGGGAAGCCCCCCAGGACATCTCGCGCTTCGGACCTTATGCGGT
ACCATACAAGCTGATCATCTCGGACACAGGACAGGTCAGCGACATCGAGCCCGATACGGTTGCCACAGCGATGCACATGT
TGCTTTAG

Upstream 100 bases:

>100_bases
TTTCTTCAACGCATCGTCACCAAAAAAAAGCGGCACGGAAACGTTCTCTGGCCCGCTGAACTCCATCGCAATCCTCGCCC
AGGAGAAACTCGGCGACTGC

Downstream 100 bases:

>100_bases
GACTAAATCCTTGAGCTGATCGCTTTTGGAAAAGAGGACATAAAGCACATATATTGAGGATAAGTATTTTCACACCACAC
CTATACAGGGTATAGGTTAC

Product: glycosyl transferase family 9

Products: NA

Alternate protein names: Glycosyl Transferase Family Protein; Family 9 Glycosyl Transferase

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MLLTPLIRNLRKRHPDLEIHIIAFSQASAAFFKNDPAVTAIHLAKKNPLQHLKGVRSARFDLLFNTKDHPSTHFLLQSVL
IPARFKVGHANPFHKGLYDRLIDMDFHSHMALKNCSLLTVLGIDASTEDCRPSLPAMPVSNEILQLLRQLDGLRPIGVNI
SAGQPNRYWTEEKWKTLIGSFPDERFVVLSAPDDTDAKQRLEKSCPNAITTPPTRNLYEASCIVAALRLLVTPDTSMVHV
ASGAGIPIVGLYREAPQDISRFGPYAVPYKLIISDTGQVSDIEPDTVATAMHMLL

Sequences:

>Translated_295_residues
MLLTPLIRNLRKRHPDLEIHIIAFSQASAAFFKNDPAVTAIHLAKKNPLQHLKGVRSARFDLLFNTKDHPSTHFLLQSVL
IPARFKVGHANPFHKGLYDRLIDMDFHSHMALKNCSLLTVLGIDASTEDCRPSLPAMPVSNEILQLLRQLDGLRPIGVNI
SAGQPNRYWTEEKWKTLIGSFPDERFVVLSAPDDTDAKQRLEKSCPNAITTPPTRNLYEASCIVAALRLLVTPDTSMVHV
ASGAGIPIVGLYREAPQDISRFGPYAVPYKLIISDTGQVSDIEPDTVATAMHMLL
>Mature_295_residues
MLLTPLIRNLRKRHPDLEIHIIAFSQASAAFFKNDPAVTAIHLAKKNPLQHLKGVRSARFDLLFNTKDHPSTHFLLQSVL
IPARFKVGHANPFHKGLYDRLIDMDFHSHMALKNCSLLTVLGIDASTEDCRPSLPAMPVSNEILQLLRQLDGLRPIGVNI
SAGQPNRYWTEEKWKTLIGSFPDERFVVLSAPDDTDAKQRLEKSCPNAITTPPTRNLYEASCIVAALRLLVTPDTSMVHV
ASGAGIPIVGLYREAPQDISRFGPYAVPYKLIISDTGQVSDIEPDTVATAMHMLL

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 32754; Mature: 32754

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLTPLIRNLRKRHPDLEIHIIAFSQASAAFFKNDPAVTAIHLAKKNPLQHLKGVRSARF
CCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHE
DLLFNTKDHPSTHFLLQSVLIPARFKVGHANPFHKGLYDRLIDMDFHSHMALKNCSLLTV
EEEECCCCCCHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHCCHHHHHHHCCCCEEEE
LGIDASTEDCRPSLPAMPVSNEILQLLRQLDGLRPIGVNISAGQPNRYWTEEKWKTLIGS
EECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHC
FPDERFVVLSAPDDTDAKQRLEKSCPNAITTPPTRNLYEASCIVAALRLLVTPDTSMVHV
CCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEE
ASGAGIPIVGLYREAPQDISRFGPYAVPYKLIISDTGQVSDIEPDTVATAMHMLL
ECCCCCCEEEHHHHCHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHC
>Mature Secondary Structure
MLLTPLIRNLRKRHPDLEIHIIAFSQASAAFFKNDPAVTAIHLAKKNPLQHLKGVRSARF
CCCHHHHHHHHHHCCCCEEEEEEECCCCHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHE
DLLFNTKDHPSTHFLLQSVLIPARFKVGHANPFHKGLYDRLIDMDFHSHMALKNCSLLTV
EEEECCCCCCHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHCCHHHHHHHCCCCEEEE
LGIDASTEDCRPSLPAMPVSNEILQLLRQLDGLRPIGVNISAGQPNRYWTEEKWKTLIGS
EECCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHC
FPDERFVVLSAPDDTDAKQRLEKSCPNAITTPPTRNLYEASCIVAALRLLVTPDTSMVHV
CCCCCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEE
ASGAGIPIVGLYREAPQDISRFGPYAVPYKLIISDTGQVSDIEPDTVATAMHMLL
ECCCCCCEEEHHHHCHHHHHHCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Transferring other glycosyl groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA