| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
Click here to switch to the map view.
The map label for this gene is 193213228
Identifier: 193213228
GI number: 193213228
Start: 1732696
End: 1733409
Strand: Direct
Name: 193213228
Synonym: Cpar_1583
Alternate gene names: NA
Gene position: 1732696-1733409 (Clockwise)
Preceding gene: 193213226
Following gene: 193213229
Centisome position: 75.69
GC content: 60.08
Gene sequence:
>714_bases ATGCTCAAGCTCCGTAGCCTTCCGCTGACTGTTTTGCTCCTCATGGCAGGGATGTTGACAGGCCGTCCAAACACGGCGGT TTTGGCCGAAGAAGTTTCGCACGCATCTGAAATTGTTCAGTACGTGAAGGAAGATAAGGTTTATTTACTGGAAAAAATCC GCGGCCAGATAACAAAGCCCTCGGAAAAGCTGCTGGTTCGGGCGTTGCTGACCGAAGACGGCCCTCAAGCCGCTGCGCTC TATCGCGAGCAGCTCGAGAAGTATCCCGACCCCCAGCTCGACCCGATCAGCCGCCGCAGACTGAACGCCTACCAGCAGGC AGTCGCTACATCGGCGGGCTTGCCGGTCATGCCAATCAAAGGCTCGGTCGCCCCGAAGCCAGTGGTAACAGCAGCTCCAC TGCCGACGCAACCGAACGTCAGCGCACTCCCGGCAGCTGCACCTGCCACCGCACCTGCGGACTCTGTTGTGCCGAAGCCG AGCGCTCCGGCCGCAAGCGATGGCCCCTTTACGCTCCAGTTTGGAAGCTTCGACAGCATCACCAACGCCGATCAGCTCGT CGCGCAACTCGCCTCCAGAGCCCCGGCTTCGGTGCGGCTGATCAACGGCATTTACAAAGTCCGGATGAACCGTACCTTTA ACTCACGCCAGGAGGCTGCGGCGTTCGGGCGCACGATGCCAATTGAGTCGATCGTGGTTCCCGCCCAGCCATGA
Upstream 100 bases:
>100_bases GAACAGGAATTGATTTAATCGTAAAATATTTCCCATATTCACGTAAAGGCAGCGGCAGCAGAGTTGCCTATTCTCAACGA CCAGACTATCGAATCGAACC
Downstream 100 bases:
>100_bases TCCGGCACACCATTTCGCATCAGACCGCAGGTTCATGAAGAAGGAATTCGATATCATCGGCCGTTCTCAGGCAATTCTTC AGCTTAAAGAGCTCGCTTTG
Product: Sporulation domain-containing protein
Products: NA
Alternate protein names: Sporulation Domain Protein
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MLKLRSLPLTVLLLMAGMLTGRPNTAVLAEEVSHASEIVQYVKEDKVYLLEKIRGQITKPSEKLLVRALLTEDGPQAAAL YREQLEKYPDPQLDPISRRRLNAYQQAVATSAGLPVMPIKGSVAPKPVVTAAPLPTQPNVSALPAAAPATAPADSVVPKP SAPAASDGPFTLQFGSFDSITNADQLVAQLASRAPASVRLINGIYKVRMNRTFNSRQEAAAFGRTMPIESIVVPAQP
Sequences:
>Translated_237_residues MLKLRSLPLTVLLLMAGMLTGRPNTAVLAEEVSHASEIVQYVKEDKVYLLEKIRGQITKPSEKLLVRALLTEDGPQAAAL YREQLEKYPDPQLDPISRRRLNAYQQAVATSAGLPVMPIKGSVAPKPVVTAAPLPTQPNVSALPAAAPATAPADSVVPKP SAPAASDGPFTLQFGSFDSITNADQLVAQLASRAPASVRLINGIYKVRMNRTFNSRQEAAAFGRTMPIESIVVPAQP >Mature_237_residues MLKLRSLPLTVLLLMAGMLTGRPNTAVLAEEVSHASEIVQYVKEDKVYLLEKIRGQITKPSEKLLVRALLTEDGPQAAAL YREQLEKYPDPQLDPISRRRLNAYQQAVATSAGLPVMPIKGSVAPKPVVTAAPLPTQPNVSALPAAAPATAPADSVVPKP SAPAASDGPFTLQFGSFDSITNADQLVAQLASRAPASVRLINGIYKVRMNRTFNSRQEAAAFGRTMPIESIVVPAQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25326; Mature: 25326
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKLRSLPLTVLLLMAGMLTGRPNTAVLAEEVSHASEIVQYVKEDKVYLLEKIRGQITKP CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SEKLLVRALLTEDGPQAAALYREQLEKYPDPQLDPISRRRLNAYQQAVATSAGLPVMPIK HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECC GSVAPKPVVTAAPLPTQPNVSALPAAAPATAPADSVVPKPSAPAASDGPFTLQFGSFDSI CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC TNADQLVAQLASRAPASVRLINGIYKVRMNRTFNSRQEAAAFGRTMPIESIVVPAQP CCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHEECCCCC >Mature Secondary Structure MLKLRSLPLTVLLLMAGMLTGRPNTAVLAEEVSHASEIVQYVKEDKVYLLEKIRGQITKP CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SEKLLVRALLTEDGPQAAALYREQLEKYPDPQLDPISRRRLNAYQQAVATSAGLPVMPIK HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECC GSVAPKPVVTAAPLPTQPNVSALPAAAPATAPADSVVPKPSAPAASDGPFTLQFGSFDSI CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC TNADQLVAQLASRAPASVRLINGIYKVRMNRTFNSRQEAAAFGRTMPIESIVVPAQP CCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA