Definition Chlorobaculum parvum NCIB 8327 chromosome, complete genome.
Accession NC_011027
Length 2,289,249

Click here to switch to the map view.

The map label for this gene is 193213103

Identifier: 193213103

GI number: 193213103

Start: 1595012

End: 1595512

Strand: Direct

Name: 193213103

Synonym: Cpar_1458

Alternate gene names: NA

Gene position: 1595012-1595512 (Clockwise)

Preceding gene: 193213102

Following gene: 193213104

Centisome position: 69.67

GC content: 48.5

Gene sequence:

>501_bases
ATGACCGGCTGGCCTGCCTCCGGGTGTACGAGGAGTATCTGTCAATCAACCGCAAACAGCAAGGGAGGTAGCGGTTTGGG
TCAGAAAACACTGCAGACAGGTTTTGCCGGTCTGCTGACAGAGGCTCGATACCGGAATCTCCGGTATCTGCTGGCGGCTG
GCTGGAATACTCTTTTCGGCTATTTTGCGGGCGTTGGCTTGTACCTCACGCTGTCGAAATTCATCCATATAACCATCATC
GGGCTGATCGGCAATATCGTTTCCATTGCCATGTCATTTGTTGTTTACAAATTATTTGTCTTTCGTACCAAGGGACGGTG
GTTTATTGAATATCTCAAAAGCAATATCGTTTATGGCTTTGGTGCGCTCATTGGCATTGTCCTGCTCTGGCTGCTGGTGG
ATTATGCCCGGCTTTCGATCTGGATCGCGCAGTTTCTTATTATTGCCGTTACAGCGCTGATTTCTTTTTTTGGACACCGA
GGCTTTACCTTCAAACGATAA

Upstream 100 bases:

>100_bases
ACTTGGTCTGACTGTTACTGTGCCATTGCATGAGGCAATCAAACGTGCCGTTATGGCTGCTCGTGGAGCTGATTGATGCA
GGCAATAGTATTTGATCTCG

Downstream 100 bases:

>100_bases
CCATGTTTTGTTATGAATGAGAGCGGTAAAAAGATGATCAGCCTGGTCTCTCCTTGTTTCAATGAAGAGGAGAATGTCGA
GGAACTCTACCGGCAGCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 165

Protein sequence:

>166_residues
MTGWPASGCTRSICQSTANSKGGSGLGQKTLQTGFAGLLTEARYRNLRYLLAAGWNTLFGYFAGVGLYLTLSKFIHITII
GLIGNIVSIAMSFVVYKLFVFRTKGRWFIEYLKSNIVYGFGALIGIVLLWLLVDYARLSIWIAQFLIIAVTALISFFGHR
GFTFKR

Sequences:

>Translated_166_residues
MTGWPASGCTRSICQSTANSKGGSGLGQKTLQTGFAGLLTEARYRNLRYLLAAGWNTLFGYFAGVGLYLTLSKFIHITII
GLIGNIVSIAMSFVVYKLFVFRTKGRWFIEYLKSNIVYGFGALIGIVLLWLLVDYARLSIWIAQFLIIAVTALISFFGHR
GFTFKR
>Mature_165_residues
TGWPASGCTRSICQSTANSKGGSGLGQKTLQTGFAGLLTEARYRNLRYLLAAGWNTLFGYFAGVGLYLTLSKFIHITIIG
LIGNIVSIAMSFVVYKLFVFRTKGRWFIEYLKSNIVYGFGALIGIVLLWLLVDYARLSIWIAQFLIIAVTALISFFGHRG
FTFKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18456; Mature: 18325

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGWPASGCTRSICQSTANSKGGSGLGQKTLQTGFAGLLTEARYRNLRYLLAAGWNTLFG
CCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFAGVGLYLTLSKFIHITIIGLIGNIVSIAMSFVVYKLFVFRTKGRWFIEYLKSNIVYGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
GALIGIVLLWLLVDYARLSIWIAQFLIIAVTALISFFGHRGFTFKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TGWPASGCTRSICQSTANSKGGSGLGQKTLQTGFAGLLTEARYRNLRYLLAAGWNTLFG
CCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YFAGVGLYLTLSKFIHITIIGLIGNIVSIAMSFVVYKLFVFRTKGRWFIEYLKSNIVYGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
GALIGIVLLWLLVDYARLSIWIAQFLIIAVTALISFFGHRGFTFKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA