Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
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Accession | NC_011027 |
Length | 2,289,249 |
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The map label for this gene is 193213103
Identifier: 193213103
GI number: 193213103
Start: 1595012
End: 1595512
Strand: Direct
Name: 193213103
Synonym: Cpar_1458
Alternate gene names: NA
Gene position: 1595012-1595512 (Clockwise)
Preceding gene: 193213102
Following gene: 193213104
Centisome position: 69.67
GC content: 48.5
Gene sequence:
>501_bases ATGACCGGCTGGCCTGCCTCCGGGTGTACGAGGAGTATCTGTCAATCAACCGCAAACAGCAAGGGAGGTAGCGGTTTGGG TCAGAAAACACTGCAGACAGGTTTTGCCGGTCTGCTGACAGAGGCTCGATACCGGAATCTCCGGTATCTGCTGGCGGCTG GCTGGAATACTCTTTTCGGCTATTTTGCGGGCGTTGGCTTGTACCTCACGCTGTCGAAATTCATCCATATAACCATCATC GGGCTGATCGGCAATATCGTTTCCATTGCCATGTCATTTGTTGTTTACAAATTATTTGTCTTTCGTACCAAGGGACGGTG GTTTATTGAATATCTCAAAAGCAATATCGTTTATGGCTTTGGTGCGCTCATTGGCATTGTCCTGCTCTGGCTGCTGGTGG ATTATGCCCGGCTTTCGATCTGGATCGCGCAGTTTCTTATTATTGCCGTTACAGCGCTGATTTCTTTTTTTGGACACCGA GGCTTTACCTTCAAACGATAA
Upstream 100 bases:
>100_bases ACTTGGTCTGACTGTTACTGTGCCATTGCATGAGGCAATCAAACGTGCCGTTATGGCTGCTCGTGGAGCTGATTGATGCA GGCAATAGTATTTGATCTCG
Downstream 100 bases:
>100_bases CCATGTTTTGTTATGAATGAGAGCGGTAAAAAGATGATCAGCCTGGTCTCTCCTTGTTTCAATGAAGAGGAGAATGTCGA GGAACTCTACCGGCAGCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTGWPASGCTRSICQSTANSKGGSGLGQKTLQTGFAGLLTEARYRNLRYLLAAGWNTLFGYFAGVGLYLTLSKFIHITII GLIGNIVSIAMSFVVYKLFVFRTKGRWFIEYLKSNIVYGFGALIGIVLLWLLVDYARLSIWIAQFLIIAVTALISFFGHR GFTFKR
Sequences:
>Translated_166_residues MTGWPASGCTRSICQSTANSKGGSGLGQKTLQTGFAGLLTEARYRNLRYLLAAGWNTLFGYFAGVGLYLTLSKFIHITII GLIGNIVSIAMSFVVYKLFVFRTKGRWFIEYLKSNIVYGFGALIGIVLLWLLVDYARLSIWIAQFLIIAVTALISFFGHR GFTFKR >Mature_165_residues TGWPASGCTRSICQSTANSKGGSGLGQKTLQTGFAGLLTEARYRNLRYLLAAGWNTLFGYFAGVGLYLTLSKFIHITIIG LIGNIVSIAMSFVVYKLFVFRTKGRWFIEYLKSNIVYGFGALIGIVLLWLLVDYARLSIWIAQFLIIAVTALISFFGHRG FTFKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18456; Mature: 18325
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGWPASGCTRSICQSTANSKGGSGLGQKTLQTGFAGLLTEARYRNLRYLLAAGWNTLFG CCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFAGVGLYLTLSKFIHITIIGLIGNIVSIAMSFVVYKLFVFRTKGRWFIEYLKSNIVYGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH GALIGIVLLWLLVDYARLSIWIAQFLIIAVTALISFFGHRGFTFKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TGWPASGCTRSICQSTANSKGGSGLGQKTLQTGFAGLLTEARYRNLRYLLAAGWNTLFG CCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YFAGVGLYLTLSKFIHITIIGLIGNIVSIAMSFVVYKLFVFRTKGRWFIEYLKSNIVYGF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH GALIGIVLLWLLVDYARLSIWIAQFLIIAVTALISFFGHRGFTFKR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA