Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
---|---|
Accession | NC_011027 |
Length | 2,289,249 |
Click here to switch to the map view.
The map label for this gene is 193213017
Identifier: 193213017
GI number: 193213017
Start: 1483644
End: 1483955
Strand: Direct
Name: 193213017
Synonym: Cpar_1368
Alternate gene names: NA
Gene position: 1483644-1483955 (Clockwise)
Preceding gene: 193213014
Following gene: 193213020
Centisome position: 64.81
GC content: 54.49
Gene sequence:
>312_bases ATGACTCCGGACGACCGCAACAAACAAGATTCTGAAATGCTCGGCACCATCGGCAAAGTCGCGCTTGAAAAGCTGGACAG CCTCTCTTCGAAAATCAGGGATGACGTCGCGACCGAGGCCGACAAGGCCAATCATGAAATCCTCTCTGAAATTGTAGCAC TCGCCTCAAATCGCCTGTCGGTAGAGAAAAACGAATCGATTGTCGAAGATGGCGGCGAGGCGTGGACGGAACGCACCTCC GAGACGCACTACCCCCATATCCGCCTGCACGGCGGCGCACTTGAGGACGATCCACTGAAGATGAATTTGTGA
Upstream 100 bases:
>100_bases AGTGCTAAAAGCTGAATCCATTATAAAAAAAGATTTTCAGACCGCAAATACTTTTTCATCACGAAATACAGCAAAAGCCT GCAAATCGAACCCATTAGTT
Downstream 100 bases:
>100_bases GGATTCAAACGTTCAGAAACAGCGAGGGCAGAAACGGTTCTCTTGCCCTTGCTGTTTCTCAGGTTTTTCGTTGACCTGCT GCTACACGTACCCCTTCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MTPDDRNKQDSEMLGTIGKVALEKLDSLSSKIRDDVATEADKANHEILSEIVALASNRLSVEKNESIVEDGGEAWTERTS ETHYPHIRLHGGALEDDPLKMNL
Sequences:
>Translated_103_residues MTPDDRNKQDSEMLGTIGKVALEKLDSLSSKIRDDVATEADKANHEILSEIVALASNRLSVEKNESIVEDGGEAWTERTS ETHYPHIRLHGGALEDDPLKMNL >Mature_102_residues TPDDRNKQDSEMLGTIGKVALEKLDSLSSKIRDDVATEADKANHEILSEIVALASNRLSVEKNESIVEDGGEAWTERTSE THYPHIRLHGGALEDDPLKMNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11399; Mature: 11268
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPDDRNKQDSEMLGTIGKVALEKLDSLSSKIRDDVATEADKANHEILSEIVALASNRLS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC VEKNESIVEDGGEAWTERTSETHYPHIRLHGGALEDDPLKMNL CCCCCHHHHCCHHHHHHCCCCCCCCEEEEECCCCCCCCEECCC >Mature Secondary Structure TPDDRNKQDSEMLGTIGKVALEKLDSLSSKIRDDVATEADKANHEILSEIVALASNRLS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC VEKNESIVEDGGEAWTERTSETHYPHIRLHGGALEDDPLKMNL CCCCCHHHHCCHHHHHHCCCCCCCCEEEEECCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA