Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
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Accession | NC_011004 |
Length | 5,744,041 |
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The map label for this gene is 192289036
Identifier: 192289036
GI number: 192289036
Start: 659119
End: 660018
Strand: Reverse
Name: 192289036
Synonym: Rpal_0606
Alternate gene names: NA
Gene position: 660018-659119 (Counterclockwise)
Preceding gene: 192289037
Following gene: 192289030
Centisome position: 11.49
GC content: 68.11
Gene sequence:
>900_bases ATGTTCACCGTCGCTTCGCTCTGGATCCCCTTTACGCTCGTCGCTGCGCTCGGCCAGGTCGCGCGCAACGCGATGCAGCG CTCGCTGACCGGGCCGCTCGGCACCTGGGGCGCCACCAACATCCGCTTCCTGTTCGGCTTCCCGTTCTCGCTGCTGTTCT TCGCCGGCGTGATCGTGGCAACCGGAGATACCGTGAGCTGGCCGGGCCTCGAATTCTGGCCGTGGCTGCTGCTCGGCGCG CTGTCGCAGATCGCCGCCACCGGGATGATGCTGGCAGCGATGAACGAACGCTCGTTCGTGGTCACCACCGCATATCTGAA GACCGAGGCGATCCAGACCGCGATCTTCGGCTTCGTGTTCCTCGGCGATCACCTGAACCTGTGGAAGGTGGTGGCGATCC TGATCGCGACCGTCGGCGTCGTCGTCACGGCGCTGCGCCCGGGCGCCGCCCGCGGCCTCGTCAGCCTGCGGCCGACGCTG CTCGGGCTGGGCGCCGCAGCAGCCTTTGCACTGTCGGCGGTCGGGTTTCGCGGCGCGATCATCGTGGTCCCGGATGTCAC CTTCGTCACCGCCGCGACCTTCACGCTGGTGTTCGCGCTCGGGGTGCAGACGCTGGTGCTGACGATCTACCTGCTGGCGC GGGCGCCGCAGGTGCTGCGCGACATCCTGAGGCTGTGGCGACCGTCGATGCTGGCCGGCTTCATCGGGGCGGCGGCATCG CAGTTCTGGTTCCTGGCGTTTGCGCTCACCGCCGCCGCCAATGTCCGCACCCTGGCGCTGATCGAGGTGCTGTTCGCGCA GGCCGTGGCATACTACTCGTTCAAGCAGCCGGTGGCGCCGCGCGAGGTTATCGGCATTCTCCTGATCGTGCTCGGCGTCG CGCTGCTGGTCGCGGTGTGA
Upstream 100 bases:
>100_bases CGGCGCGCGAAATTCCTCGCAATGCAGGCATGATTCGAGTCCGGTTGACCGCTGCGAACAGGATCGCCGAGGCTGCAGCG TCCCTCCTGCCGCCATCGCC
Downstream 100 bases:
>100_bases TTACTTCAGCGCGATTATCACGGCACCGGCGGCGATCAGCGCGATCCCGATCCACTCGGTGCCGGACGGGCGCTCGCCGA GAAACAGCACGCCGAACAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MFTVASLWIPFTLVAALGQVARNAMQRSLTGPLGTWGATNIRFLFGFPFSLLFFAGVIVATGDTVSWPGLEFWPWLLLGA LSQIAATGMMLAAMNERSFVVTTAYLKTEAIQTAIFGFVFLGDHLNLWKVVAILIATVGVVVTALRPGAARGLVSLRPTL LGLGAAAAFALSAVGFRGAIIVVPDVTFVTAATFTLVFALGVQTLVLTIYLLARAPQVLRDILRLWRPSMLAGFIGAAAS QFWFLAFALTAAANVRTLALIEVLFAQAVAYYSFKQPVAPREVIGILLIVLGVALLVAV
Sequences:
>Translated_299_residues MFTVASLWIPFTLVAALGQVARNAMQRSLTGPLGTWGATNIRFLFGFPFSLLFFAGVIVATGDTVSWPGLEFWPWLLLGA LSQIAATGMMLAAMNERSFVVTTAYLKTEAIQTAIFGFVFLGDHLNLWKVVAILIATVGVVVTALRPGAARGLVSLRPTL LGLGAAAAFALSAVGFRGAIIVVPDVTFVTAATFTLVFALGVQTLVLTIYLLARAPQVLRDILRLWRPSMLAGFIGAAAS QFWFLAFALTAAANVRTLALIEVLFAQAVAYYSFKQPVAPREVIGILLIVLGVALLVAV >Mature_299_residues MFTVASLWIPFTLVAALGQVARNAMQRSLTGPLGTWGATNIRFLFGFPFSLLFFAGVIVATGDTVSWPGLEFWPWLLLGA LSQIAATGMMLAAMNERSFVVTTAYLKTEAIQTAIFGFVFLGDHLNLWKVVAILIATVGVVVTALRPGAARGLVSLRPTL LGLGAAAAFALSAVGFRGAIIVVPDVTFVTAATFTLVFALGVQTLVLTIYLLARAPQVLRDILRLWRPSMLAGFIGAAAS QFWFLAFALTAAANVRTLALIEVLFAQAVAYYSFKQPVAPREVIGILLIVLGVALLVAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31818; Mature: 31818
Theoretical pI: Translated: 11.34; Mature: 11.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTVASLWIPFTLVAALGQVARNAMQRSLTGPLGTWGATNIRFLFGFPFSLLFFAGVIVA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEECCHHHHHHHHHHHHC TGDTVSWPGLEFWPWLLLGALSQIAATGMMLAAMNERSFVVTTAYLKTEAIQTAIFGFVF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHH LGDHLNLWKVVAILIATVGVVVTALRPGAARGLVSLRPTLLGLGAAAAFALSAVGFRGAI HCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEE IVVPDVTFVTAATFTLVFALGVQTLVLTIYLLARAPQVLRDILRLWRPSMLAGFIGAAAS EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHH QFWFLAFALTAAANVRTLALIEVLFAQAVAYYSFKQPVAPREVIGILLIVLGVALLVAV HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFTVASLWIPFTLVAALGQVARNAMQRSLTGPLGTWGATNIRFLFGFPFSLLFFAGVIVA CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEECCHHHHHHHHHHHHC TGDTVSWPGLEFWPWLLLGALSQIAATGMMLAAMNERSFVVTTAYLKTEAIQTAIFGFVF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHH LGDHLNLWKVVAILIATVGVVVTALRPGAARGLVSLRPTLLGLGAAAAFALSAVGFRGAI HCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEE IVVPDVTFVTAATFTLVFALGVQTLVLTIYLLARAPQVLRDILRLWRPSMLAGFIGAAAS EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHH QFWFLAFALTAAANVRTLALIEVLFAQAVAYYSFKQPVAPREVIGILLIVLGVALLVAV HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA