Definition Rhodopseudomonas palustris TIE-1 chromosome, complete genome.
Accession NC_011004
Length 5,744,041

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The map label for this gene is 192289036

Identifier: 192289036

GI number: 192289036

Start: 659119

End: 660018

Strand: Reverse

Name: 192289036

Synonym: Rpal_0606

Alternate gene names: NA

Gene position: 660018-659119 (Counterclockwise)

Preceding gene: 192289037

Following gene: 192289030

Centisome position: 11.49

GC content: 68.11

Gene sequence:

>900_bases
ATGTTCACCGTCGCTTCGCTCTGGATCCCCTTTACGCTCGTCGCTGCGCTCGGCCAGGTCGCGCGCAACGCGATGCAGCG
CTCGCTGACCGGGCCGCTCGGCACCTGGGGCGCCACCAACATCCGCTTCCTGTTCGGCTTCCCGTTCTCGCTGCTGTTCT
TCGCCGGCGTGATCGTGGCAACCGGAGATACCGTGAGCTGGCCGGGCCTCGAATTCTGGCCGTGGCTGCTGCTCGGCGCG
CTGTCGCAGATCGCCGCCACCGGGATGATGCTGGCAGCGATGAACGAACGCTCGTTCGTGGTCACCACCGCATATCTGAA
GACCGAGGCGATCCAGACCGCGATCTTCGGCTTCGTGTTCCTCGGCGATCACCTGAACCTGTGGAAGGTGGTGGCGATCC
TGATCGCGACCGTCGGCGTCGTCGTCACGGCGCTGCGCCCGGGCGCCGCCCGCGGCCTCGTCAGCCTGCGGCCGACGCTG
CTCGGGCTGGGCGCCGCAGCAGCCTTTGCACTGTCGGCGGTCGGGTTTCGCGGCGCGATCATCGTGGTCCCGGATGTCAC
CTTCGTCACCGCCGCGACCTTCACGCTGGTGTTCGCGCTCGGGGTGCAGACGCTGGTGCTGACGATCTACCTGCTGGCGC
GGGCGCCGCAGGTGCTGCGCGACATCCTGAGGCTGTGGCGACCGTCGATGCTGGCCGGCTTCATCGGGGCGGCGGCATCG
CAGTTCTGGTTCCTGGCGTTTGCGCTCACCGCCGCCGCCAATGTCCGCACCCTGGCGCTGATCGAGGTGCTGTTCGCGCA
GGCCGTGGCATACTACTCGTTCAAGCAGCCGGTGGCGCCGCGCGAGGTTATCGGCATTCTCCTGATCGTGCTCGGCGTCG
CGCTGCTGGTCGCGGTGTGA

Upstream 100 bases:

>100_bases
CGGCGCGCGAAATTCCTCGCAATGCAGGCATGATTCGAGTCCGGTTGACCGCTGCGAACAGGATCGCCGAGGCTGCAGCG
TCCCTCCTGCCGCCATCGCC

Downstream 100 bases:

>100_bases
TTACTTCAGCGCGATTATCACGGCACCGGCGGCGATCAGCGCGATCCCGATCCACTCGGTGCCGGACGGGCGCTCGCCGA
GAAACAGCACGCCGAACAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MFTVASLWIPFTLVAALGQVARNAMQRSLTGPLGTWGATNIRFLFGFPFSLLFFAGVIVATGDTVSWPGLEFWPWLLLGA
LSQIAATGMMLAAMNERSFVVTTAYLKTEAIQTAIFGFVFLGDHLNLWKVVAILIATVGVVVTALRPGAARGLVSLRPTL
LGLGAAAAFALSAVGFRGAIIVVPDVTFVTAATFTLVFALGVQTLVLTIYLLARAPQVLRDILRLWRPSMLAGFIGAAAS
QFWFLAFALTAAANVRTLALIEVLFAQAVAYYSFKQPVAPREVIGILLIVLGVALLVAV

Sequences:

>Translated_299_residues
MFTVASLWIPFTLVAALGQVARNAMQRSLTGPLGTWGATNIRFLFGFPFSLLFFAGVIVATGDTVSWPGLEFWPWLLLGA
LSQIAATGMMLAAMNERSFVVTTAYLKTEAIQTAIFGFVFLGDHLNLWKVVAILIATVGVVVTALRPGAARGLVSLRPTL
LGLGAAAAFALSAVGFRGAIIVVPDVTFVTAATFTLVFALGVQTLVLTIYLLARAPQVLRDILRLWRPSMLAGFIGAAAS
QFWFLAFALTAAANVRTLALIEVLFAQAVAYYSFKQPVAPREVIGILLIVLGVALLVAV
>Mature_299_residues
MFTVASLWIPFTLVAALGQVARNAMQRSLTGPLGTWGATNIRFLFGFPFSLLFFAGVIVATGDTVSWPGLEFWPWLLLGA
LSQIAATGMMLAAMNERSFVVTTAYLKTEAIQTAIFGFVFLGDHLNLWKVVAILIATVGVVVTALRPGAARGLVSLRPTL
LGLGAAAAFALSAVGFRGAIIVVPDVTFVTAATFTLVFALGVQTLVLTIYLLARAPQVLRDILRLWRPSMLAGFIGAAAS
QFWFLAFALTAAANVRTLALIEVLFAQAVAYYSFKQPVAPREVIGILLIVLGVALLVAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31818; Mature: 31818

Theoretical pI: Translated: 11.34; Mature: 11.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTVASLWIPFTLVAALGQVARNAMQRSLTGPLGTWGATNIRFLFGFPFSLLFFAGVIVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEECCHHHHHHHHHHHHC
TGDTVSWPGLEFWPWLLLGALSQIAATGMMLAAMNERSFVVTTAYLKTEAIQTAIFGFVF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHH
LGDHLNLWKVVAILIATVGVVVTALRPGAARGLVSLRPTLLGLGAAAAFALSAVGFRGAI
HCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEE
IVVPDVTFVTAATFTLVFALGVQTLVLTIYLLARAPQVLRDILRLWRPSMLAGFIGAAAS
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHH
QFWFLAFALTAAANVRTLALIEVLFAQAVAYYSFKQPVAPREVIGILLIVLGVALLVAV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MFTVASLWIPFTLVAALGQVARNAMQRSLTGPLGTWGATNIRFLFGFPFSLLFFAGVIVA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHEECCHHHHHHHHHHHHC
TGDTVSWPGLEFWPWLLLGALSQIAATGMMLAAMNERSFVVTTAYLKTEAIQTAIFGFVF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHH
LGDHLNLWKVVAILIATVGVVVTALRPGAARGLVSLRPTLLGLGAAAAFALSAVGFRGAI
HCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEE
IVVPDVTFVTAATFTLVFALGVQTLVLTIYLLARAPQVLRDILRLWRPSMLAGFIGAAAS
EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHH
QFWFLAFALTAAANVRTLALIEVLFAQAVAYYSFKQPVAPREVIGILLIVLGVALLVAV
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA