Definition | Rhodopseudomonas palustris TIE-1 chromosome, complete genome. |
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Accession | NC_011004 |
Length | 5,744,041 |
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The map label for this gene is 192289030
Identifier: 192289030
GI number: 192289030
Start: 655558
End: 655857
Strand: Reverse
Name: 192289030
Synonym: Rpal_0600
Alternate gene names: NA
Gene position: 655857-655558 (Counterclockwise)
Preceding gene: 192289036
Following gene: 192289029
Centisome position: 11.42
GC content: 66.67
Gene sequence:
>300_bases GTGTCCGAGCCCACCGACAAGCCTGCCGATGTCACCTATCTGGATATTCCGACCGCGCCGCACGTGTATTTCGACATCGC GCCGGCGCACGGGGTAATTGCCAACGGCGTCGAGGTCGAACTCGCTGCGCGGACGCTGAACCCGCTGGCGGACGGTACGG TCGAGGTGAAGTTCGTCACCACCGCCCGGCTGCGCTGCAGCCAAGCCGGCGCGCAGCACTTGCGCAACGCGCTGGATGCG GTGCTGAAGATGTTCGAAGCCTCGCAGCAGGGCCCGGCCGCGGCCTCCAAGCTGAACTGA
Upstream 100 bases:
>100_bases GAGGCTAACGCTATCCCCGCAACCGTCAAGCGACAGAACCTTGTAGTGCCGGGCCGGAAAAAAGCGCACAACACCGCCAG TCCTTCTCCGGGAGATCGCC
Downstream 100 bases:
>100_bases TCGTGCTTTCTCGATTCTGATTTGCCATGGCTGACTCGACGCCGATCCTGTTCGATCGCCGCCTGCTGGCGGCACGGCTG CACCGCGCCGCCGCGCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MSEPTDKPADVTYLDIPTAPHVYFDIAPAHGVIANGVEVELAARTLNPLADGTVEVKFVTTARLRCSQAGAQHLRNALDA VLKMFEASQQGPAAASKLN
Sequences:
>Translated_99_residues MSEPTDKPADVTYLDIPTAPHVYFDIAPAHGVIANGVEVELAARTLNPLADGTVEVKFVTTARLRCSQAGAQHLRNALDA VLKMFEASQQGPAAASKLN >Mature_98_residues SEPTDKPADVTYLDIPTAPHVYFDIAPAHGVIANGVEVELAARTLNPLADGTVEVKFVTTARLRCSQAGAQHLRNALDAV LKMFEASQQGPAAASKLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10485; Mature: 10354
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEPTDKPADVTYLDIPTAPHVYFDIAPAHGVIANGVEVELAARTLNPLADGTVEVKFVT CCCCCCCCCCEEEEECCCCCEEEEEECCCCCEEECCEEEEEEECCCCCCCCCEEEEEEEE TARLRCSQAGAQHLRNALDAVLKMFEASQQGPAAASKLN EHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SEPTDKPADVTYLDIPTAPHVYFDIAPAHGVIANGVEVELAARTLNPLADGTVEVKFVT CCCCCCCCCEEEEECCCCCEEEEEECCCCCEEECCEEEEEEECCCCCCCCCEEEEEEEE TARLRCSQAGAQHLRNALDAVLKMFEASQQGPAAASKLN EHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA