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The map label for this gene is ycbL [H]

Identifier: 192289001

GI number: 192289001

Start: 620277

End: 620942

Strand: Reverse

Name: ycbL [H]

Synonym: Rpal_0571

Alternate gene names: 192289001

Gene position: 620942-620277 (Counterclockwise)

Preceding gene: 192289002

Following gene: 192289000

Centisome position: 10.81

GC content: 66.22

Gene sequence:

>666_bases
ATGAGCGAGACCCAGACCAAGGCCAAAGCCGGCGCCGCGATCATTCCCGTGACGCCGTTTCAGCAGAACTGCACGCTGTT
GTGGTGCGAAGCCACCCGCAAGGCTGTGGTGGTCGATCCCGGCGGCGACGTGCCCGAGATCCTGGCCGCGATCGAAAAAA
CCAAAGTCGACGTCGGGGCGATCTGGCTCACCCATGGCCACATCGACCATGTCGGCGGCGCGGCCGATCTGCGCGACGCG
CTTAAGGTCGAGGTGATCGGCCCGCATCGCGACGACCAGTTCCTGCTCGACAACGTCGTCAACTCCGGCCGCAGCTTCGG
GATCGACGGCGTCCGCGACGTCACCCCGGACCGCTGGCTCGACGACGGTGACAGCGTCAGCATCGGCGAGCTGAATTTTC
AGATCCTGCACTGCCCCGGCCATTCGCCGGGCAGCGTCGTGTTCTTCAACGATGCGATGCGGTTCGCCTTCGTCGGCGAC
GTGCTGTTTGCCGGCTCGGTCGGCCGTACCGATCTGCCGGGCGGCAGCCACGCCACCCTGATTCAGTCGATCACCCAGAA
GCTGCTGCCGCTCGGCGACGACGTCGGCTTCATCTGCGGTCACGGCCCCGGCTCCAGCTTCGGTCAGGAGCGCCTGACCA
ACCCGTTCCTGACCGGCGAAGCCTGA

Upstream 100 bases:

>100_bases
TGAAGCGATAACGAGCGACGCCGGCCGTTCGGGCGCAGCCGCGATATTGGAGGGTGAGCTCAGCTTTGACTCACCCTCTT
CGACGCGGCATTGTCCGGCC

Downstream 100 bases:

>100_bases
TCGCCGCCTCCGGCTCTTTCGTTTTTCCGATTTGACCTGTTTTCCGATCTGACCCGGCCGGTGCGACTCGTTCGCGCTGG
CCAAAACCGCTTTCCACGCG

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MSETQTKAKAGAAIIPVTPFQQNCTLLWCEATRKAVVVDPGGDVPEILAAIEKTKVDVGAIWLTHGHIDHVGGAADLRDA
LKVEVIGPHRDDQFLLDNVVNSGRSFGIDGVRDVTPDRWLDDGDSVSIGELNFQILHCPGHSPGSVVFFNDAMRFAFVGD
VLFAGSVGRTDLPGGSHATLIQSITQKLLPLGDDVGFICGHGPGSSFGQERLTNPFLTGEA

Sequences:

>Translated_221_residues
MSETQTKAKAGAAIIPVTPFQQNCTLLWCEATRKAVVVDPGGDVPEILAAIEKTKVDVGAIWLTHGHIDHVGGAADLRDA
LKVEVIGPHRDDQFLLDNVVNSGRSFGIDGVRDVTPDRWLDDGDSVSIGELNFQILHCPGHSPGSVVFFNDAMRFAFVGD
VLFAGSVGRTDLPGGSHATLIQSITQKLLPLGDDVGFICGHGPGSSFGQERLTNPFLTGEA
>Mature_220_residues
SETQTKAKAGAAIIPVTPFQQNCTLLWCEATRKAVVVDPGGDVPEILAAIEKTKVDVGAIWLTHGHIDHVGGAADLRDAL
KVEVIGPHRDDQFLLDNVVNSGRSFGIDGVRDVTPDRWLDDGDSVSIGELNFQILHCPGHSPGSVVFFNDAMRFAFVGDV
LFAGSVGRTDLPGGSHATLIQSITQKLLPLGDDVGFICGHGPGSSFGQERLTNPFLTGEA

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]

Homologues:

Organism=Homo sapiens, GI41327741, Length=218, Percent_Identity=27.9816513761468, Blast_Score=73, Evalue=2e-13,
Organism=Escherichia coli, GI1787158, Length=207, Percent_Identity=54.1062801932367, Blast_Score=238, Evalue=3e-64,
Organism=Caenorhabditis elegans, GI17538952, Length=198, Percent_Identity=28.7878787878788, Blast_Score=81, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 23439; Mature: 23307

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSETQTKAKAGAAIIPVTPFQQNCTLLWCEATRKAVVVDPGGDVPEILAAIEKTKVDVGA
CCCCHHHHHCCEEEEECCCCCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHCCCEEEE
IWLTHGHIDHVGGAADLRDALKVEVIGPHRDDQFLLDNVVNSGRSFGIDGVRDVTPDRWL
EEEECCCHHCCCCHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
DDGDSVSIGELNFQILHCPGHSPGSVVFFNDAMRFAFVGDVLFAGSVGRTDLPGGSHATL
CCCCCEEEEEEEEEEEECCCCCCCCEEEECCCEEEHHHHHHHHCCCCCCCCCCCCCHHHH
IQSITQKLLPLGDDVGFICGHGPGSSFGQERLTNPFLTGEA
HHHHHHHHCCCCCCCEEEEECCCCCCCCHHHCCCCCCCCCC
>Mature Secondary Structure 
SETQTKAKAGAAIIPVTPFQQNCTLLWCEATRKAVVVDPGGDVPEILAAIEKTKVDVGA
CCCHHHHHCCEEEEECCCCCCCCEEEEEECCCCEEEECCCCCHHHHHHHHHHCCCEEEE
IWLTHGHIDHVGGAADLRDALKVEVIGPHRDDQFLLDNVVNSGRSFGIDGVRDVTPDRWL
EEEECCCHHCCCCHHHHCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
DDGDSVSIGELNFQILHCPGHSPGSVVFFNDAMRFAFVGDVLFAGSVGRTDLPGGSHATL
CCCCCEEEEEEEEEEEECCCCCCCCEEEECCCEEEHHHHHHHHCCCCCCCCCCCCCHHHH
IQSITQKLLPLGDDVGFICGHGPGSSFGQERLTNPFLTGEA
HHHHHHHHCCCCCCCEEEEECCCCCCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]