Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
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Accession | NC_010997 |
Length | 1,091,523 |
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The map label for this gene is 190895054
Identifier: 190895054
GI number: 190895054
Start: 776583
End: 777257
Strand: Reverse
Name: 190895054
Synonym: RHECIAT_PC0000720
Alternate gene names: NA
Gene position: 777257-776583 (Counterclockwise)
Preceding gene: 190895056
Following gene: 190895053
Centisome position: 71.21
GC content: 59.41
Gene sequence:
>675_bases TTGAAGAAAATGCAACGTCGTTTTGCCGTCGAGTACAAAACCGGCAGGCGAAAGCTCGAGTCCAGGTCAAACTCGATCTG GGGCAACCTGGATCTAAAGTCAGTCGCACGCGACCTCGAGGAAGAGACCCTGGCGTATCGTGCAAATAGCTCGCAGAATG ACAGCACCGGCAGCGAAATGCCTTTACCGGACCAAGATCAGGACCAGCCGTTGTTGACATCGCCTCTCACGCCATCGACA ACTGCATCAGATACACAGGAGATGAGCATGGCCGACGAAACTCATGCGACAACCAACGCCGAGGTGCCGGCCGTTGTCGA AACGCCCACTGCGCCGAAGAAGCAGCGCAAACCTCGCGCGAAGAAAGCGGCCGCACCCGAAAGGGCGTCAGCTGACGCTG CCGCCGAGCCAGCAACTGCGTTGACCGGCGCGGGTGATGTGAAGAGGAGAGGGCGCAAGGCAAGGGTGAGTGAAGCTGCG GGAGGCGCCAAACGTGCGCCTGCGGGTCGTGCTAGAAAGGCTGTGCCGACCGCCCCGGCCGCGCCGATGACGGCGATCGA TGAGATGGAAGATCTGCTGCAGTTGGAAGCGGAAAATCAACGACTGCGCAAGCTTCTTGCCGAAAAACTTCGCGCTGAAA ATGCCGATCTGCGCAAGCGGCTCAAGCTCGACTGA
Upstream 100 bases:
>100_bases CGGCAGGCTGTTGAGGGGATGGACTGGCAGAGCGGTAATCGTTATTTCCGATGTATCAGCATTCACCAACCATCCGAGAA TTCCCAAAGGGCCTCTTATA
Downstream 100 bases:
>100_bases TATGAACAGCCGGTCAATCGCCGGCCGCATTTCTATGCTTGTTGAGACATACAGTTTGGCGGCGGTCGATGCTGTTGCCG GAAGTAAACCTTGCAGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MKKMQRRFAVEYKTGRRKLESRSNSIWGNLDLKSVARDLEEETLAYRANSSQNDSTGSEMPLPDQDQDQPLLTSPLTPST TASDTQEMSMADETHATTNAEVPAVVETPTAPKKQRKPRAKKAAAPERASADAAAEPATALTGAGDVKRRGRKARVSEAA GGAKRAPAGRARKAVPTAPAAPMTAIDEMEDLLQLEAENQRLRKLLAEKLRAENADLRKRLKLD
Sequences:
>Translated_224_residues MKKMQRRFAVEYKTGRRKLESRSNSIWGNLDLKSVARDLEEETLAYRANSSQNDSTGSEMPLPDQDQDQPLLTSPLTPST TASDTQEMSMADETHATTNAEVPAVVETPTAPKKQRKPRAKKAAAPERASADAAAEPATALTGAGDVKRRGRKARVSEAA GGAKRAPAGRARKAVPTAPAAPMTAIDEMEDLLQLEAENQRLRKLLAEKLRAENADLRKRLKLD >Mature_224_residues MKKMQRRFAVEYKTGRRKLESRSNSIWGNLDLKSVARDLEEETLAYRANSSQNDSTGSEMPLPDQDQDQPLLTSPLTPST TASDTQEMSMADETHATTNAEVPAVVETPTAPKKQRKPRAKKAAAPERASADAAAEPATALTGAGDVKRRGRKARVSEAA GGAKRAPAGRARKAVPTAPAAPMTAIDEMEDLLQLEAENQRLRKLLAEKLRAENADLRKRLKLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24385; Mature: 24385
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKMQRRFAVEYKTGRRKLESRSNSIWGNLDLKSVARDLEEETLAYRANSSQNDSTGSEM CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PLPDQDQDQPLLTSPLTPSTTASDTQEMSMADETHATTNAEVPAVVETPTAPKKQRKPRA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHCCCCH KKAAAPERASADAAAEPATALTGAGDVKRRGRKARVSEAAGGAKRAPAGRARKAVPTAPA HHHCCCCCCCCCCCCCCCHHHCCCHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC APMTAIDEMEDLLQLEAENQRLRKLLAEKLRAENADLRKRLKLD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC >Mature Secondary Structure MKKMQRRFAVEYKTGRRKLESRSNSIWGNLDLKSVARDLEEETLAYRANSSQNDSTGSEM CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PLPDQDQDQPLLTSPLTPSTTASDTQEMSMADETHATTNAEVPAVVETPTAPKKQRKPRA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHCCCCH KKAAAPERASADAAAEPATALTGAGDVKRRGRKARVSEAAGGAKRAPAGRARKAVPTAPA HHHCCCCCCCCCCCCCCCHHHCCCHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCC APMTAIDEMEDLLQLEAENQRLRKLLAEKLRAENADLRKRLKLD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA