Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
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Accession | NC_010997 |
Length | 1,091,523 |
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The map label for this gene is 190895053
Identifier: 190895053
GI number: 190895053
Start: 775917
End: 776453
Strand: Reverse
Name: 190895053
Synonym: RHECIAT_PC0000719
Alternate gene names: NA
Gene position: 776453-775917 (Counterclockwise)
Preceding gene: 190895054
Following gene: 190895050
Centisome position: 71.13
GC content: 58.66
Gene sequence:
>537_bases ATGGCGTCTCCCTGGAAGTTTCTGGTCCGACTGATCTCACCGGGACGCGAACAAAAGAAAGAAAGCGGCTCGGCCAGCGA GGCTGCGCCGGATGCGTCGGCTACTGCGGGTTTGGCTGACGCGGCTGCCAGCGAGAGCATAAATGGCGCTGATCGGCGAG CAAGCGCCGACACGCATCGTCATGCCGTTGCAATTTCCTCACAGCCCGTCCATTCCGAGAAGACCGAAAACGAAGGCGCC GACGGCGTCGACCGCGAAGGCATCAAACACGAAGGGGCCGCTGCTCGTGCATTCCCCGGTGGGCTTGATATCGACGTCAC TGCTGCACGAGGTATTACGGACCTCAAGCGAGCTGCGGAGGTCGCGCCGCGTAAGCAACAAAGTCGCCGCAGGAAAGCGG AAGCGATTTCACACATGTCCCAAGCAGACGAGATGAGCCTTGACGAAGAGATCAGGATGCTCAGGGGTGAGTTGGCTGTA AAGCTAAAGCTGCAAAATGCGCAGTTGAGAAAAATGCTGGAGCGATTTGAGCGGTGA
Upstream 100 bases:
>100_bases TTTCTATGCTTGTTGAGACATACAGTTTGGCGGCGGTCGATGCTGTTGCCGGAAGTAAACCTTGCAGCCTGTTTGCGGGA TAAAGCTCGAGGGCGGATAG
Downstream 100 bases:
>100_bases AACCGCGTTGCATGGGTTCAGCAGAGATCGACTGCAACCGCACACGGCGCCAATGCGGTCGGCAAAGGGGATCAGGTGAT CGTCATGACCGATGAGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MASPWKFLVRLISPGREQKKESGSASEAAPDASATAGLADAAASESINGADRRASADTHRHAVAISSQPVHSEKTENEGA DGVDREGIKHEGAAARAFPGGLDIDVTAARGITDLKRAAEVAPRKQQSRRRKAEAISHMSQADEMSLDEEIRMLRGELAV KLKLQNAQLRKMLERFER
Sequences:
>Translated_178_residues MASPWKFLVRLISPGREQKKESGSASEAAPDASATAGLADAAASESINGADRRASADTHRHAVAISSQPVHSEKTENEGA DGVDREGIKHEGAAARAFPGGLDIDVTAARGITDLKRAAEVAPRKQQSRRRKAEAISHMSQADEMSLDEEIRMLRGELAV KLKLQNAQLRKMLERFER >Mature_177_residues ASPWKFLVRLISPGREQKKESGSASEAAPDASATAGLADAAASESINGADRRASADTHRHAVAISSQPVHSEKTENEGAD GVDREGIKHEGAAARAFPGGLDIDVTAARGITDLKRAAEVAPRKQQSRRRKAEAISHMSQADEMSLDEEIRMLRGELAVK LKLQNAQLRKMLERFER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19236; Mature: 19105
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASPWKFLVRLISPGREQKKESGSASEAAPDASATAGLADAAASESINGADRRASADTHR CCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCHHH HAVAISSQPVHSEKTENEGADGVDREGIKHEGAAARAFPGGLDIDVTAARGITDLKRAAE HEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHCCHHHHHHHHH VAPRKQQSRRRKAEAISHMSQADEMSLDEEIRMLRGELAVKLKLQNAQLRKMLERFER HCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEECCHHHHHHHHHHCC >Mature Secondary Structure ASPWKFLVRLISPGREQKKESGSASEAAPDASATAGLADAAASESINGADRRASADTHR CCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCHHH HAVAISSQPVHSEKTENEGADGVDREGIKHEGAAARAFPGGLDIDVTAARGITDLKRAAE HEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHCCHHHHHHHHH VAPRKQQSRRRKAEAISHMSQADEMSLDEEIRMLRGELAVKLKLQNAQLRKMLERFER HCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEECCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA