Definition Rhizobium etli CIAT 652 plasmid pC, complete sequence.
Accession NC_010997
Length 1,091,523

Click here to switch to the map view.

The map label for this gene is 190895049

Identifier: 190895049

GI number: 190895049

Start: 773218

End: 773400

Strand: Reverse

Name: 190895049

Synonym: RHECIAT_PC0000715

Alternate gene names: NA

Gene position: 773400-773218 (Counterclockwise)

Preceding gene: 190895050

Following gene: 190895047

Centisome position: 70.86

GC content: 57.38

Gene sequence:

>183_bases
GTGCATGACGCGGTAGCCGGATACGTCGATTTCGAGGACATCGACATCCATCCTCCACAGCTTTTCCAGTTTTTCCTGAG
GGCAGTCATGGGTGTTCCCTATCTCGATGAAGTGGCCGTCGCGGTCAACGGTCTCTTCGCAGAGGAGATCGCGGTGCTGG
AGCGCGCGATCACCCTGCATTGA

Upstream 100 bases:

>100_bases
ATCTATCGGCCGGCGGGGGTCGTCCAGTGCTGGCCGGGACGTTGACTCTGGATCACCATGCGAGGTGCGCGATCAAGGGT
GATTTCATCCAAGTCACGGA

Downstream 100 bases:

>100_bases
AATCCACATCGTACCGGATGGAAGAATAGGACAGGAACGATTACTATTGAGCAGGTGAGGTATATGCCATCTCGTCTCGG
TCTCGCATTCTGTCGTTCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 60

Protein sequence:

>60_residues
MHDAVAGYVDFEDIDIHPPQLFQFFLRAVMGVPYLDEVAVAVNGLFAEEIAVLERAITLH

Sequences:

>Translated_60_residues
MHDAVAGYVDFEDIDIHPPQLFQFFLRAVMGVPYLDEVAVAVNGLFAEEIAVLERAITLH
>Mature_60_residues
MHDAVAGYVDFEDIDIHPPQLFQFFLRAVMGVPYLDEVAVAVNGLFAEEIAVLERAITLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6715; Mature: 6715

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDAVAGYVDFEDIDIHPPQLFQFFLRAVMGVPYLDEVAVAVNGLFAEEIAVLERAITLH
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHDAVAGYVDFEDIDIHPPQLFQFFLRAVMGVPYLDEVAVAVNGLFAEEIAVLERAITLH
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA