Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
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Accession | NC_010997 |
Length | 1,091,523 |
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The map label for this gene is 190895047
Identifier: 190895047
GI number: 190895047
Start: 772454
End: 772846
Strand: Reverse
Name: 190895047
Synonym: RHECIAT_PC0000713
Alternate gene names: NA
Gene position: 772846-772454 (Counterclockwise)
Preceding gene: 190895049
Following gene: 190895044
Centisome position: 70.8
GC content: 58.02
Gene sequence:
>393_bases ATGGATCCGCTTCAGCACGGGGGAGGGCACGCTTTGCCGGCGCGCGTACTGATCGTAGAATGGATCGGCAACAGACGCTC TTGGTACGAAAACGAACGGGACCTAAGTCCGGGCTTTCAAGTGCCTACCAACTGGCCTAGCGTCGGGTGTCCAACCCCTG ATGGACGATGGAAGGAAGGCGCAGCTGGTGTATGTTATCGGTCTCCTTCTGAGCCTTCCTTTCCGAAAGCATCTCAAGGA TTCGAAGAGGTTTTCTGGGACGGTCGGCTGGGGCTACGGCCAGTTCGGAAACGGCGTCGCGAACGCGAGCGAACCGTTAA TCAAGACCTGCTTCGCCTCCATGTGAAGCTCGACCCTGCCAAGGACTTCGTCTTCAGCCACTACTCCCCGTGA
Upstream 100 bases:
>100_bases GAGGCTTTCCGGCTCGAAACTCATGGCAGTCCTCCTTCGTGATGCGAAGGAAACAGCGGGAAGTCAATTTGGTTCAGGGG CCGGGACTTAGGTCCTATCG
Downstream 100 bases:
>100_bases TGCGCGAAGCGACGTAGAGCGCCGGGAGGCCGCCATGAGAACAAGATGCGTGATGACCCCAGCCGAGACCATGGCGGCGT CCGCGACATGTGGCAGTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MDPLQHGGGHALPARVLIVEWIGNRRSWYENERDLSPGFQVPTNWPSVGCPTPDGRWKEGAAGVCYRSPSEPSFPKASQG FEEVFWDGRLGLRPVRKRRRERERTVNQDLLRLHVKLDPAKDFVFSHYSP
Sequences:
>Translated_130_residues MDPLQHGGGHALPARVLIVEWIGNRRSWYENERDLSPGFQVPTNWPSVGCPTPDGRWKEGAAGVCYRSPSEPSFPKASQG FEEVFWDGRLGLRPVRKRRRERERTVNQDLLRLHVKLDPAKDFVFSHYSP >Mature_130_residues MDPLQHGGGHALPARVLIVEWIGNRRSWYENERDLSPGFQVPTNWPSVGCPTPDGRWKEGAAGVCYRSPSEPSFPKASQG FEEVFWDGRLGLRPVRKRRRERERTVNQDLLRLHVKLDPAKDFVFSHYSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14938; Mature: 14938
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPLQHGGGHALPARVLIVEWIGNRRSWYENERDLSPGFQVPTNWPSVGCPTPDGRWKEG CCCCCCCCCCCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AAGVCYRSPSEPSFPKASQGFEEVFWDGRLGLRPVRKRRRERERTVNQDLLRLHVKLDPA CCCEEECCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCH KDFVFSHYSP HHHHHCCCCC >Mature Secondary Structure MDPLQHGGGHALPARVLIVEWIGNRRSWYENERDLSPGFQVPTNWPSVGCPTPDGRWKEG CCCCCCCCCCCCHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AAGVCYRSPSEPSFPKASQGFEEVFWDGRLGLRPVRKRRRERERTVNQDLLRLHVKLDPA CCCEEECCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCH KDFVFSHYSP HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA