Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
---|---|
Accession | NC_010997 |
Length | 1,091,523 |
Click here to switch to the map view.
The map label for this gene is bglSc [H]
Identifier: 190895032
GI number: 190895032
Start: 756899
End: 759364
Strand: Reverse
Name: bglSc [H]
Synonym: RHECIAT_PC0000698
Alternate gene names: 190895032
Gene position: 759364-756899 (Counterclockwise)
Preceding gene: 190895035
Following gene: 190895031
Centisome position: 69.57
GC content: 63.75
Gene sequence:
>2466_bases ATGATCGATTCCATTCTCGACCAGATGACGCTGGAGGAGCAGGTCTCGCTTTTGTCGGGCGCCGATTTCTGGACGACGGT TCCAGTCGAGCGTCTCGGCGTGCCCAAGATCAAGGTGACGGACGGTCCGAATGGAGCGCGCGGCGCCGGCTCGCTGGTCG CGGGCGTCAAGGCGACCTGCTTTCCCGTCGCCATTGCGCTCGGGGCCAGCTGGAATCCCGGGCTCGTCAGGCAGATGGGC GCGGCACTTGCCCGCCAGGCAAAGAGCAAGGGTGCCGCCGTGCTGCTCGCGCCCACGGTCAATATTCATCGCTCCGGCCT CAACGGCCGCAATTTCGAATGTTATTCCGAAGATCCGATGCTGACCGCGGAACTGGCTGTCGCTTATATCGAGGGCGTGC AGGGCGAGGGGGTGGCGGCGACGGTCAAGCATTTCGCCGGCAATGAATCGGAGATCGAGCGGCAGACCATGTCTTCCGAT ATCGACGAGCGGACGCTGCGCGAAATCTACCTCCCGCCCTTCGAGCAAGCCGTCCGTCGCGCCGGCGTCATGGCCGTCAT GTCCTCCTATAACCGCCTGAACGGCACCTATACGAGCGAGCATCACTGGCTCTTGACCAAGGTGCTGCGCGAGGAGTGGG GCTTCGACGGCATCGTAATGTCAGACTGGTTCGGCTCTCACTCGACGGCTGAGACAATCAATGCCGGCCTCGATCTCGAA ATGCCGGGCCCCGCGCGCGATCGCGGCGACAAACTGGTCGCTGCCGTGCTCGAGGGCAAGGTCGATGCCGCGACGGTGCG CGCTGCGGCGCGGCGCATATTGGTTTTGCTGGAGCGGGTCGGCGCGTTCAAGGAGAAACCCGATCTCACCGAGCGGGCGG TCGACCTTCCGGAAGACCGGGCGCTGATCCGGCGTCTCGGCGCGGAAGGCGCAGTGCTTCTGAAGAACGACGGCATCCTG CCAATTGCCAAGGCCTCGCTCGACCGCATCGCTGTTATCGGCCCCAATGCGGCCAGCGCCCGCGTCATGGGCGGCGGCAG CGCGCAGATCGCGGCGCATTATACGGTGAGCCCGCTCGAAGGCATTCGCGCCGCTCTCTCCAATGCCAACAGCATCAGCC ATGCCGTCGGCTGCCGCCATAATCGGCTGATCGATGTGTTCAAGGGAAAGATCGCGGTCGAGTATTTCAAGGGGCGCGGC TGCAAGGGCGATCCGCAGCACGTCGAAACGGTCGACAAGGGCGAATTCTTCTGGTTCGAACTGCCGTCGGGCGAACTCGA CCCAGCAGACTTCTCGGCCCGGATGACGATGCGATTCGTGCCGGAGGAGAGCGGCGAGCATGTGTTCGGCATGACTAATG CCGGCCTGGCGCGGCTGTTCGTCGACGGAATGCTGATGGTAGACGGCCATGACGGCTGGACGCGCGGCGAGAACTATTTC GGCACCGCCAACGACGAACAGCGCGGTATCGCACCGCTTGATGCCGGCCGGTCATACGAGATCGCCGTCGAATTTGAGCC GTCGACCGCGACCGAGGAGGGGATCAACCTCATCGCTGTGCGCTTCGGCGTCGAAAAGCCGCTCGGCGACGCCGACATCG AGGCGGCCGTCGAGACCGCCCGTAATGCCGACGTCGCGCTTCTCTTCGTCGGCCGCGACGGCGAGTGGGATACCGAAGGG CTGGACCTACCAGATATGCGGCTGCCCGGCCTGCAGGAGGAACTGATCGAGCGGGTTTCGGCCGTCAATGCCAATACCGT AGTCGTGTTGCAGACCGGCGGCCCGGTGGAAATGCCCTGGCTCGGCAACGTTCGCGCCGTGTTGCAGATGTGGTATCCGG GGCAGGAACTCGGCAACGCCGTCGCCGATGTGCTGTTCGGCGATGTCGAGCCCGGTGGGCGCCTGTCACAGACCTTCCCC AAGGCGCTTGCCGACAATTCCGCCATGACAGGCGATCCTGCGGTCTATCCCGGCCAGGATGGGCATGTACGTTATGCCGA AGGCGTCTTCGTCGGTTACCGTCACCACGACAGCCGCGCCGTCGCTCCGCTCTTCCCTTTCGGCTTCGGCCTTGGCTATA CGCGCTTCCGTTGGAGCGAACCGCGGGTGTCGGCCAGCGAAATGGATGCTGACGGGGTGACCATCAGTGTCGACTTGACC AATATAGGCGATCGGCCTGGATCGGAACTGGTTCAGCTTTATGTGCGTTCGCCCAAATCCAAAGTGGAACGGCCAGACAA GGAACTGCGCGCCTTCGCCAAGCTTTCGCTGCAGCCTGGCGAAACGGGCACGGCGGTCATGAAGGTCGTGCCGCGCGACC TCGCTTACTTTGACCCGGAGGCCGGAGCCTTCCGGGCCGAGCCGGGTGACTATCGGCTGGTTATTGCAGCCAATGCCGCA GATATAAAATCCGTGATCGAACTGCGGTCACCGGCCAGCTATCTGTTGCCGCCGTCGTACGCGTGA
Upstream 100 bases:
>100_bases GGTACTTTCCCATCCTCTCTTCCATACATCAGCTTTGCCCGATTGACATCTTAAAAATACCGAGTAATCGGTAGGTTTAA GGGCTTGCTTGGAGGTTTGC
Downstream 100 bases:
>100_bases TTGCCTAGCGTGGTGATGCCTCTGCTTGTCATCGGATCTTCTCCAAAAGTCTTCCAGCAGTCGAAGAACATCATCAGGTG CCGATTTAGGTGAACAAAAA
Product: beta-glucosidase
Products: NA
Alternate protein names: Beta-D-glucoside glucohydrolase; Cellobiase; Gentiobiase [H]
Number of amino acids: Translated: 821; Mature: 821
Protein sequence:
>821_residues MIDSILDQMTLEEQVSLLSGADFWTTVPVERLGVPKIKVTDGPNGARGAGSLVAGVKATCFPVAIALGASWNPGLVRQMG AALARQAKSKGAAVLLAPTVNIHRSGLNGRNFECYSEDPMLTAELAVAYIEGVQGEGVAATVKHFAGNESEIERQTMSSD IDERTLREIYLPPFEQAVRRAGVMAVMSSYNRLNGTYTSEHHWLLTKVLREEWGFDGIVMSDWFGSHSTAETINAGLDLE MPGPARDRGDKLVAAVLEGKVDAATVRAAARRILVLLERVGAFKEKPDLTERAVDLPEDRALIRRLGAEGAVLLKNDGIL PIAKASLDRIAVIGPNAASARVMGGGSAQIAAHYTVSPLEGIRAALSNANSISHAVGCRHNRLIDVFKGKIAVEYFKGRG CKGDPQHVETVDKGEFFWFELPSGELDPADFSARMTMRFVPEESGEHVFGMTNAGLARLFVDGMLMVDGHDGWTRGENYF GTANDEQRGIAPLDAGRSYEIAVEFEPSTATEEGINLIAVRFGVEKPLGDADIEAAVETARNADVALLFVGRDGEWDTEG LDLPDMRLPGLQEELIERVSAVNANTVVVLQTGGPVEMPWLGNVRAVLQMWYPGQELGNAVADVLFGDVEPGGRLSQTFP KALADNSAMTGDPAVYPGQDGHVRYAEGVFVGYRHHDSRAVAPLFPFGFGLGYTRFRWSEPRVSASEMDADGVTISVDLT NIGDRPGSELVQLYVRSPKSKVERPDKELRAFAKLSLQPGETGTAVMKVVPRDLAYFDPEAGAFRAEPGDYRLVIAANAA DIKSVIELRSPASYLLPPSYA
Sequences:
>Translated_821_residues MIDSILDQMTLEEQVSLLSGADFWTTVPVERLGVPKIKVTDGPNGARGAGSLVAGVKATCFPVAIALGASWNPGLVRQMG AALARQAKSKGAAVLLAPTVNIHRSGLNGRNFECYSEDPMLTAELAVAYIEGVQGEGVAATVKHFAGNESEIERQTMSSD IDERTLREIYLPPFEQAVRRAGVMAVMSSYNRLNGTYTSEHHWLLTKVLREEWGFDGIVMSDWFGSHSTAETINAGLDLE MPGPARDRGDKLVAAVLEGKVDAATVRAAARRILVLLERVGAFKEKPDLTERAVDLPEDRALIRRLGAEGAVLLKNDGIL PIAKASLDRIAVIGPNAASARVMGGGSAQIAAHYTVSPLEGIRAALSNANSISHAVGCRHNRLIDVFKGKIAVEYFKGRG CKGDPQHVETVDKGEFFWFELPSGELDPADFSARMTMRFVPEESGEHVFGMTNAGLARLFVDGMLMVDGHDGWTRGENYF GTANDEQRGIAPLDAGRSYEIAVEFEPSTATEEGINLIAVRFGVEKPLGDADIEAAVETARNADVALLFVGRDGEWDTEG LDLPDMRLPGLQEELIERVSAVNANTVVVLQTGGPVEMPWLGNVRAVLQMWYPGQELGNAVADVLFGDVEPGGRLSQTFP KALADNSAMTGDPAVYPGQDGHVRYAEGVFVGYRHHDSRAVAPLFPFGFGLGYTRFRWSEPRVSASEMDADGVTISVDLT NIGDRPGSELVQLYVRSPKSKVERPDKELRAFAKLSLQPGETGTAVMKVVPRDLAYFDPEAGAFRAEPGDYRLVIAANAA DIKSVIELRSPASYLLPPSYA >Mature_821_residues MIDSILDQMTLEEQVSLLSGADFWTTVPVERLGVPKIKVTDGPNGARGAGSLVAGVKATCFPVAIALGASWNPGLVRQMG AALARQAKSKGAAVLLAPTVNIHRSGLNGRNFECYSEDPMLTAELAVAYIEGVQGEGVAATVKHFAGNESEIERQTMSSD IDERTLREIYLPPFEQAVRRAGVMAVMSSYNRLNGTYTSEHHWLLTKVLREEWGFDGIVMSDWFGSHSTAETINAGLDLE MPGPARDRGDKLVAAVLEGKVDAATVRAAARRILVLLERVGAFKEKPDLTERAVDLPEDRALIRRLGAEGAVLLKNDGIL PIAKASLDRIAVIGPNAASARVMGGGSAQIAAHYTVSPLEGIRAALSNANSISHAVGCRHNRLIDVFKGKIAVEYFKGRG CKGDPQHVETVDKGEFFWFELPSGELDPADFSARMTMRFVPEESGEHVFGMTNAGLARLFVDGMLMVDGHDGWTRGENYF GTANDEQRGIAPLDAGRSYEIAVEFEPSTATEEGINLIAVRFGVEKPLGDADIEAAVETARNADVALLFVGRDGEWDTEG LDLPDMRLPGLQEELIERVSAVNANTVVVLQTGGPVEMPWLGNVRAVLQMWYPGQELGNAVADVLFGDVEPGGRLSQTFP KALADNSAMTGDPAVYPGQDGHVRYAEGVFVGYRHHDSRAVAPLFPFGFGLGYTRFRWSEPRVSASEMDADGVTISVDLT NIGDRPGSELVQLYVRSPKSKVERPDKELRAFAKLSLQPGETGTAVMKVVPRDLAYFDPEAGAFRAEPGDYRLVIAANAA DIKSVIELRSPASYLLPPSYA
Specific function: Involved in modifying a vir-inducing plant signal molecule. Hydrolyzes coniferin but not cellobiose [H]
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788453, Length=278, Percent_Identity=34.1726618705036, Blast_Score=151, Evalue=1e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019800 - InterPro: IPR002772 - InterPro: IPR001764 - InterPro: IPR017853 - InterPro: IPR011658 [H]
Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]
EC number: =3.2.1.21 [H]
Molecular weight: Translated: 88591; Mature: 88591
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS00775 GLYCOSYL_HYDROL_F3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDSILDQMTLEEQVSLLSGADFWTTVPVERLGVPKIKVTDGPNGARGAGSLVAGVKATC CHHHHHHHHHHHHHHHHHCCCCCEEECCHHHCCCCEEEEECCCCCCCCCCHHHHCCHHHH FPVAIALGASWNPGLVRQMGAALARQAKSKGAAVLLAPTVNIHRSGLNGRNFECYSEDPM HHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCEEEECCCCC LTAELAVAYIEGVQGEGVAATVKHFAGNESEIERQTMSSDIDERTLREIYLPPFEQAVRR HHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHH AGVMAVMSSYNRLNGTYTSEHHWLLTKVLREEWGFDGIVMSDWFGSHSTAETINAGLDLE HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHCCCEEE MPGPARDRGDKLVAAVLEGKVDAATVRAAARRILVLLERVGAFKEKPDLTERAVDLPEDR CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHH ALIRRLGAEGAVLLKNDGILPIAKASLDRIAVIGPNAASARVMGGGSAQIAAHYTVSPLE HHHHHHCCCCEEEEECCCCCEEECCCCCEEEEECCCCCCEEEECCCCCEEEEEEECCHHH GIRAALSNANSISHAVGCRHNRLIDVFKGKIAVEYFKGRGCKGDPQHVETVDKGEFFWFE HHHHHHHCCCHHHHHHCCCCCCCHHHHCCEEEEEEECCCCCCCCHHHHCCCCCCCEEEEE LPSGELDPADFSARMTMRFVPEESGEHVFGMTNAGLARLFVDGMLMVDGHDGWTRGENYF CCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCHHHHHHCCEEEEECCCCCCCCCCCC GTANDEQRGIAPLDAGRSYEIAVEFEPSTATEEGINLIAVRFGVEKPLGDADIEAAVETA CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHC RNADVALLFVGRDGEWDTEGLDLPDMRLPGLQEELIERVSAVNANTVVVLQTGGPVEMPW CCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCC LGNVRAVLQMWYPGQELGNAVADVLFGDVEPGGRLSQTFPKALADNSAMTGDPAVYPGQD CCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC GHVRYAEGVFVGYRHHDSRAVAPLFPFGFGLGYTRFRWSEPRVSASEMDADGVTISVDLT CCEEEECEEEEEEEECCCCCCCCCCHHHCCCCCCEEECCCCCCCHHHCCCCCEEEEEEEC NIGDRPGSELVQLYVRSPKSKVERPDKELRAFAKLSLQPGETGTAVMKVVPRDLAYFDPE CCCCCCHHHHHHHHHHCCHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC AGAFRAEPGDYRLVIAANAADIKSVIELRSPASYLLPPSYA CCCEECCCCCEEEEEEECHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MIDSILDQMTLEEQVSLLSGADFWTTVPVERLGVPKIKVTDGPNGARGAGSLVAGVKATC CHHHHHHHHHHHHHHHHHCCCCCEEECCHHHCCCCEEEEECCCCCCCCCCHHHHCCHHHH FPVAIALGASWNPGLVRQMGAALARQAKSKGAAVLLAPTVNIHRSGLNGRNFECYSEDPM HHHHHEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCEEEECCCCC LTAELAVAYIEGVQGEGVAATVKHFAGNESEIERQTMSSDIDERTLREIYLPPFEQAVRR HHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHH AGVMAVMSSYNRLNGTYTSEHHWLLTKVLREEWGFDGIVMSDWFGSHSTAETINAGLDLE HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHCCCEEE MPGPARDRGDKLVAAVLEGKVDAATVRAAARRILVLLERVGAFKEKPDLTERAVDLPEDR CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCHHH ALIRRLGAEGAVLLKNDGILPIAKASLDRIAVIGPNAASARVMGGGSAQIAAHYTVSPLE HHHHHHCCCCEEEEECCCCCEEECCCCCEEEEECCCCCCEEEECCCCCEEEEEEECCHHH GIRAALSNANSISHAVGCRHNRLIDVFKGKIAVEYFKGRGCKGDPQHVETVDKGEFFWFE HHHHHHHCCCHHHHHHCCCCCCCHHHHCCEEEEEEECCCCCCCCHHHHCCCCCCCEEEEE LPSGELDPADFSARMTMRFVPEESGEHVFGMTNAGLARLFVDGMLMVDGHDGWTRGENYF CCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCCCHHHHHHCCEEEEECCCCCCCCCCCC GTANDEQRGIAPLDAGRSYEIAVEFEPSTATEEGINLIAVRFGVEKPLGDADIEAAVETA CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHC RNADVALLFVGRDGEWDTEGLDLPDMRLPGLQEELIERVSAVNANTVVVLQTGGPVEMPW CCCCEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCC LGNVRAVLQMWYPGQELGNAVADVLFGDVEPGGRLSQTFPKALADNSAMTGDPAVYPGQD CCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC GHVRYAEGVFVGYRHHDSRAVAPLFPFGFGLGYTRFRWSEPRVSASEMDADGVTISVDLT CCEEEECEEEEEEEECCCCCCCCCCHHHCCCCCCEEECCCCCCCHHHCCCCCEEEEEEEC NIGDRPGSELVQLYVRSPKSKVERPDKELRAFAKLSLQPGETGTAVMKVVPRDLAYFDPE CCCCCCHHHHHHHHHHCCHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC AGAFRAEPGDYRLVIAANAADIKSVIELRSPASYLLPPSYA CCCEECCCCCEEEEEEECHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1537792 [H]